Pochonia chlamydosporia: VFPPC_03560
Help
Entry
VFPPC_03560 CDS
T09407
Name
(RefSeq) zinc finger protein
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
pchm
Pochonia chlamydosporia
Brite
KEGG Orthology (KO) [BR:
pchm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pchm04131
]
VFPPC_03560
04121 Ubiquitin system [BR:
pchm04121
]
VFPPC_03560
Enzymes [BR:
pchm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
VFPPC_03560
Membrane trafficking [BR:
pchm04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
VFPPC_03560
Ubiquitin system [BR:
pchm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
VFPPC_03560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_3
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-rbx1
zf-RING_5
zf-ANAPC11
Zn_ribbon_19
HypA
zf-RING_16
Zn_ribbon_PaaD
PHD
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
28847045
NCBI-ProteinID:
XP_018147765
UniProt:
A0A179G167
LinkDB
All DBs
Position
2:<5003492..>5005312
Genome browser
AA seq
550 aa
AA seq
DB search
MASQSPRDGHLDAAAGREVVFCHACSNEWYREDHGLMCPYCESEITEIVSPENDPRHMDD
SSGSTSPGLPPLRFADDSDPEEADIEEHMGPHGFSFRRSTRAGPNDIHHDPSIDPVVQRF
QDIIHSLGQPPRRAPPINLFGRPENDTFGPPRVHRTTFTSGPFGGGTASVTIFTTPGFVS
RGGPGSGGIGGVGGDGDEEPLHRGNIDPFQAIFSNVIRDMGPPDRPGEDSPQLGIARGLR
EILNLLNTGNTRMGDVVYSQEVYDQILTGLGEMYESSNRPTRVSDEKIDQLQRTTVDEEF
LKPGGKECSICLEAMELNDVATNLPCKHWFHDKCVVPWLKVGNTCPVCRTPVEAPEQAQE
NNRQGSSTGGAAASGSNSNPLHPNASTPTASFSRHNSDQTRSPGSRPTDGADTPTGRAAA
DMVSSVSLEPQPRPSNPSQSRLNEALRSVANLQREQNHDRRNRATTSGFSYDTSRLQRRT
SHSPPSPRATNLTEQGARMRQRSPSESDRRGNGDREPRRQSGALNWLRERLGGSNGSGST
QGQTRDQQQP
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggcttctcaaagccctcgtgatggccatctcgatgctgcagccggccgtgaggtggtc
ttttgtcacgcctgttccaacgaatggtatcgcgaggaccacggactgatgtgcccatat
tgcgaaagcgaaattacagaaattgtgagccctgagaatgacccccgacatatggatgat
tcgtcaggttctacgtctccgggattgccaccgctacgatttgcagacgactcagaccca
gaggaagcagatatagaggagcatatgggtccgcacggctttagcttccggaggagcact
cgagccggtccaaatgacatacatcacgatccgtcgatcgatccagtagtgcagcggttc
caggatataatacatagcctaggtcaacctcctcgccgagctccgcctatcaacttgttc
ggccgaccagaaaacgatacctttggaccccctcgagtccatcgtactacattcacatcc
ggacccttcggtggaggaaccgcatcggttacgatatttactacacccgggttcgtgtct
cgcggtggtcctggtagtggtggtatcggtggcgttggcggcgatggcgatgaggaaccc
ttacatcggggaaacattgatcctttccaagccatcttttccaatgtcattcgtgatatg
ggcccgccggaccggcctggtgaagacagtcctcaacttgggattgctaggggtctgcga
gagattctgaatctcttgaacacgggcaatactaggatgggcgatgttgtgtactctcaa
gaggtatatgatcaaattctcacaggacttggggagatgtacgagtccagcaaccgccct
acgagagtgtcagatgaaaaaatcgaccagttgcaacgcaccaccgtggacgaagaattc
ttgaagcccggaggcaaagaatgctcgatctgtttagaagcaatggagctgaatgacgtg
gctacaaatctcccctgcaagcattggtttcacgataagtgtgttgtgccgtggttaaag
gtgggcaatacatgcccggtttgtcgaaccccggttgaggcgccggagcaagcacaagag
aacaacagacaagggagcagcacaggcggtgccgctgcatctggatcaaacagcaatcct
cttcatcccaatgcctctacgccaactgcaagttttagccggcataattcggatcagacc
cgaagtcctggaagtagacctaccgacggcgcggacacccccacgggtagagcagcggca
gacatggtttcgtcagttagtttggaaccccagcctcggccatccaatccaagccaaagc
agattgaacgaggctctccgtagcgtggcaaacctacagcgagaacagaatcatgataga
cggaatcgggcaaccacctctgggttcagctatgacacgtcgcgactgcagcgtaggacg
tcgcactcgcccccaagtccaagggcgaccaatttgacagagcagggagctcggatgcga
caaaggagcccttccgaaagtgacaggcgaggaaacggagatcgagagcctcggcgacaa
tctggcgcgcttaactggcttcgagagcgattgggcggtagcaacggaagcggaagcact
caaggtcaaacccgggaccagcaacaaccttga
DBGET
integrated database retrieval system
