Pochonia chlamydosporia: VFPPC_04348
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Entry
VFPPC_04348 CDS
T09407
Name
(RefSeq) DNA polymerase gamma
KO
K02332
DNA polymerase gamma 1 [EC:
2.7.7.7
]
Organism
pchm
Pochonia chlamydosporia
Pathway
pchm03410
Base excision repair
pchm04139
Mitophagy - yeast
Brite
KEGG Orthology (KO) [BR:
pchm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
VFPPC_04348
09140 Cellular Processes
09141 Transport and catabolism
04139 Mitophagy - yeast
VFPPC_04348
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pchm03032
]
VFPPC_04348
03029 Mitochondrial biogenesis [BR:
pchm03029
]
VFPPC_04348
Enzymes [BR:
pchm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
VFPPC_04348
DNA replication proteins [BR:
pchm03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase gamma complex (mitochondrial)
VFPPC_04348
Mitochondrial biogenesis [BR:
pchm03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA polymerase
VFPPC_04348
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNApol_Exo
DNA_pol_A
Motif
Other DBs
NCBI-GeneID:
28847712
NCBI-ProteinID:
XP_018144890
UniProt:
A0A179FS64
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All DBs
Position
3:complement(1458305..1461797)
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AA seq
1142 aa
AA seq
DB search
MNALCPAAGHVQRASTASFVRIARHHAYRRLAWRAHVRWLSDIAKQENGKRRESLAIASQ
SRYNEIGVQQLSSHVFSQIFPDGCKPPPEELVKLSKDHLQRHDLLGKNTDDSGPIAFDLP
QLQGRTLDEHFYKLGSDCAEPYLSNAKQFARASVPPKPRKWVRRSGWTKYYPDGRSEPVD
VPNETMLCFDTEVMWKESPFAVMACASSPTAWYAWLSPWLLGESKNDRQLIPLGDPTKDR
VIVGHNVGYDRARVLEEYDIKQSRNAFIDTMSLHVAVNGMCSQQRPTWMKHKKNRELRER
IASQTPDNDLAELLSNKSMHDEEELWVERSSVNSLRDVAKFHLNVSIDKAVRDDFGELDR
QGILAKLDELMDYCAADVAITHRIYQIVFPNFLEVCPHPVSFAALRHLASVILPVNKSWD
AYIANSEATYHKLSDAVQERLVGLTDKALEIKNNPEKWQNDPWMKQLDWSGQEVRMVKGK
RKDDPPRPAARQKKPGMPQWYKDLFTKNDSPISITVRTRIAPLLLRLAWDGHPLFWSDKY
GWTFRVPRGESEKYTAKQMIQCTFDETEPALRDDREHEFFKLPHKDGPTARCANPMAKGY
LSYFEKGTLSSEYEYAKEALEMNASCSYWISARDRIMSQMVVYEEDISGKKSGKRRAAKS
TADSKGFILPQVIPMGTITRRAVENTWLTASNAKKNRVGSELKAMVKAPQGYCFVGADVD
SEELWIASLVGDATFKIHGGNAIGFMTLEGTKAAGTDLHSRTAGILGITRNDAKVFNYGR
IYGAGLKFAATLLRQFNPGLSEKETMEVASKLYANTKGTKTSRKVIHNKPFWRGGTESFV
FNKLEEFAEQERPRTPVLGAGITEALMGRFINKGGYLTSRINWAIQSSGVDYLHLLIVSM
DFLIRRFNIDARLAITVHDEIRYLVKEEDKYRAAMALQVANVWTRAMFAQQVGINDLPQS
CAYFSAVDIDHVLRKEVDMDCITPSHPTPIAHGESLDINTLLGKGSEAMLDPAIVPESRF
APQPELYEYTARVPVMETIQDSSRDKLSFIKAQIVDSDDELRDMVKDMKKAEAAIAAKER
PVTKSSLKNVLPYHAHPQLIPMEEPMSVSEALSAKYRNGQDGKKQWSWTRATGKNPRTST
RL
NT seq
3429 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcgctctgtcctgctgctggccacgtccagcgcgcttcgacagccagcttcgtg
cgcatagctcgccaccatgcataccggcgactggcatggcgtgcacatgttcgctggctg
tcggacatcgccaagcaagagaatggcaagcgtcgcgagagcctggcgattgcatcacaa
tccaggtacaacgagattggcgtgcagcaactaagctcccatgttttcagccagattttc
cctgacggctgcaaaccgcctcccgaagaactcgtaaaactatcaaaagaccacttacag
cgccatgacctccttggcaaaaataccgatgattccggacccatcgcctttgacctgccc
cagctgcaggggcgaaccctcgatgaacacttctacaaacttggatctgattgcgcagag
ccgtatctgtcaaacgcgaaacagttcgcccgagcgagcgttccgccgaaaccgagaaaa
tgggtgcgacgtagtgggtggacaaaatattatccagatgggcgaagcgaacctgtcgat
gttcccaacgagacgatgctctgtttcgatactgaagtcatgtggaaagagagccctttc
gctgtcatggcgtgcgcttcaagccctacagcatggtacgcatggctttctccatggctg
cttggggagtcaaagaatgaccgccagctcatcccactgggtgatccgaccaaggatcgt
gtgattgttggtcacaacgttggctacgaccgtgccagggttctagaagagtacgacatt
aagcagtcacgaaatgccttcatagataccatgtcgttgcacgtcgctgtgaacggcatg
tgctcccaacagaggccaacatggatgaagcacaagaagaatcgggaacttcgagaacgt
attgcaagtcagacacctgacaatgatcttgcggagcttttgagcaacaagagtatgcac
gacgaggaagagctatgggtagagcgcagctcagtaaactcgttgcgggatgtagccaag
tttcatctcaacgtgtctatcgacaaagcggttcgagacgactttggcgaattagatcgc
caaggcattttggcaaagttggacgaactgatggattattgtgcagcagacgtagccatc
acacaccgtatctaccagattgtgttccccaactttctggaggtatgcccacatccagtc
agctttgcagctctgcggcaccttgcgtccgtcatcttgccggtcaacaaatcgtgggac
gcatatatagcaaactctgaagcaacataccacaagctatccgatgctgttcaagaaaga
cttgttggtttgacggacaaggcactcgaaatcaagaacaacccagagaaatggcaaaac
gacccttggatgaagcagctggattggtccggacaggaagttcgcatggtcaaaggaaaa
cgcaaagacgatccgccgcggcctgcagcccgacagaagaagccaggaatgccacagtgg
tacaaagatctgtttacaaagaatgactcgcctattagcatcaccgttcgcactcggata
gcgccgctgctcctcaggctggcttgggatggccacccattgttctggtcagacaaatac
ggatggactttccgtgttccccgtggggagtcagaaaaatacactgcgaaacagatgatt
cagtgtacgtttgatgaaacggaaccagcccttcgtgatgatagagaacacgagtttttt
aagcttccacacaaagatgggcctacggcccgatgcgcaaatcccatggcgaagggatac
ttgagctatttcgagaaaggcacactctcatcagagtacgagtatgccaaggaggctttg
gaaatgaatgcgtcatgctcatattggatcagcgcaagagaccgaatcatgtctcagatg
gtagtttatgaggaagacatctccggcaagaagtcaggtaaaagacgagcagccaagtca
actgcagattccaagggctttatcttgccacaagtcattcctatgggaaccattacgcgc
cgtgccgtcgaaaatacatggttgaccgccagcaacgcaaagaagaaccgtgttggctca
gaactcaaggccatggttaaggcaccccagggctactgcttcgtcggagctgacgtcgac
tctgaggagctctggattgctagcttggttggtgatgctacattcaagatccacggtggt
aatgccattggcttcatgacactcgaaggcacaaaagcggcaggaacagacttgcactca
cggactgctggtatattgggtatcaccagaaatgatgccaaagttttcaattatgggcga
atatatggcgctggcttgaagtttgccgccactctgctgcgacaattcaaccctggcttg
tccgagaaagagactatggaagttgcttcgaagctgtacgcaaataccaagggcacgaag
acgagtcgcaaagtcatccacaacaagccattttggcgaggcgggaccgaatccttcgtc
ttcaacaagcttgaagaatttgccgagcaagaacggccacggacgccagttctaggggct
ggaatcactgaggcgctcatgggccggtttatcaacaagggtggctacctgacatcaaga
ataaactgggccattcagtcttcgggtgtcgattacctccacttgcttatagtttctatg
gatttcctcattaggagattcaacattgatgctcgtctggccatcactgttcatgacgag
atccgataccttgtcaaagaggaggacaagtaccgcgccgccatggctctccaggtggcc
aacgtctggacacgagccatgtttgctcagcaagttggcatcaacgacctgccccaatct
tgtgcgtacttttctgctgtcgatatcgaccatgtgctccgtaaggaagtcgacatggac
tgtattactcccagccatcctactcccatcgcgcatggagagagcttggacatcaacacg
ttactaggaaagggatcggaggccatgctagaccctgcaattgttccagagtctcgattt
gcaccacaacctgagctgtacgaatacacagctcgtgttcctgtgatggagaccatccaa
gactcttcgagagacaagttatcttttatcaaagctcaaatcgtcgacagcgatgacgaa
ctgcgagatatggtgaaggatatgaaaaaggcagaggcagcaattgctgccaaagagagg
ccagtgaccaaaagctcgctgaagaatgtgctaccatatcacgcacacccacaactaatc
cctatggaagaacccatgtccgtgtctgaggccttgagcgccaagtatcggaatgggcaa
gacgggaagaagcaatggtcgtggactagagctactggtaagaacccaaggacaagcacg
aggttgtaa
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