Pochonia chlamydosporia: VFPPC_04428
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Entry
VFPPC_04428 CDS
T09407
Name
(RefSeq) vacuolar protein sorting protein DigA
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
pchm
Pochonia chlamydosporia
Pathway
pchm04138
Autophagy - yeast
pchm04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pchm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04138 Autophagy - yeast
VFPPC_04428
04148 Efferocytosis
VFPPC_04428
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pchm04131
]
VFPPC_04428
Membrane trafficking [BR:
pchm04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
VFPPC_04428
Hops complex
VFPPC_04428
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pep3_Vps18
VPS18_RING_C
DUF2175
Clathrin
zf-RING_5
zf-C3HC4_2
zf-RING_16
zf-RING_2
zf_RING_Vps8_fungal
DUF1599
zf-RING_UBOX
DUF7117
zf-rbx1
zf-C3H2C3
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
28847779
NCBI-ProteinID:
XP_018144997
UniProt:
A0A179FS12
LinkDB
All DBs
Position
3:complement(<1787073..>1790100)
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AA seq
966 aa
AA seq
DB search
MSFDPSDGFVAAAPAGDGSGVDELPIFNVERAQMAFSVTAEFVAAQIANNVMILALSNGR
ILRIDLKRPEDIDDIDLPKRASEIGVIRRMFLDPTASHLLVCTALGENYYLHTQSRQPRP
LSQLRGVTIESVAWNPSHPTASTREIILGASDGNIYEAFIETANEFYKREVKHLKNLHKL
PDGPITGLWVDDLNGSPDSRRVIIGTQSRLFHLVGKIGRSHDGSGSVYTRLFESEQPVIH
EISRSSSPGHSAVVVSPDCEKPGRGEDIPDRAYAWLSAQGVFHGKLLNNPRDSSLGSKIF
ADSKTLSKAQIIAPESTGRVKPTTETVDSLLLTEWHMLSLVGNRVIATNRLTGNMVSEHD
VLATGQKAIAFTMDMQERTFWLITSDEIYEIVARDEERHIWQIMMKNRQFDSALQYARTQ
TQKETVAAAYGDYLAKKGHWTEAAVLYGRSNKPFEDIALSIIDNNQPDALRQFLLTKLAN
TKQSATMQRMIVASWLVEVFMAKLNSLDDTIITQAELSETLNPAESKMMLESVRKEYRDF
VNRYKSDLDRKTVYDIISSHGREGELLYYANVIGDYNYVLSYWVQRERWAEVLDVLKRQT
DVEVFYRYSSVLMTHVPQEMVEILMRQSELTPRNLIPALLEYNRNFSGDPNSQNQAVRYL
NYVIFQLNSKDAAIHNTLVSIYASHASKDESGLLSYLQAQGDEPRYDPDFALRLCIQHHR
TLSCVHIYTSMGQYLQAVDLALSHNEVELAAVIADRPMSNPQLRKRLWLAVARKVIAKSD
GIKAAIEFLKRCDLLKIEDLIPFFPDFVVIDDFKEEICQALEDYSRNIDNLKKEMDESSQ
TASNIKMDIAALDHRYAIVEPGEKCYVCGLPLLSRQFFVFPCQHSFHSDCMGKKVLEYSG
YGNSMKIRQLQTQIHKGMVSGAQREAVVAELDALVASACILCSDFAIKRIDEPFITTDDK
PEEWAV
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcgatcccagcgatggctttgtggccgcggcacccgctggagatggctcaggc
gtggacgagctgcccatcttcaacgtggaacgcgcgcagatggcattctccgtgacggca
gagtttgtggccgcgcaaatagcgaacaatgtcatgattctggctttgtcgaacggacgc
atcctgcgaatcgacctgaagcggcccgaggacattgatgatatcgatctcccgaaacga
gcatccgagattggcgttattcgacgcatgttcctcgaccccactgcctcccatttgctg
gtttgcactgccctcggcgaaaactactatcttcacactcaatctagacagcctcgaccg
ctgagccagcttcgcggcgttacaatcgagagcgtagcgtggaacccgtctcatcccact
gcgtcgacgcgagaaatcattcttggtgcctctgacggcaatatctacgaagcgtttatt
gaaacagccaatgagttttacaaacgagaggtcaagcatttaaagaacctgcataagctg
cctgatggccctattacggggctgtgggttgatgatttgaatggcagtcctgatagtcgg
agagtcatcattggcacacagagtaggctgtttcatttggtgggcaagattggacgaagt
cacgatggcagtggctcggtttatacgagattattcgaatccgaacaacctgtgattcat
gagatttccagaagctcatcgcctggtcattctgccgtggtagtttcgccagactgcgaa
aagccgggacgtggggaggatataccagacagagcctatgcgtggttatccgcgcagggc
gtcttccatggcaagctgctgaacaaccccagagatagcagtcttggctcgaaaatattt
gcagattccaagacgctgtcgaaagcgcaaatcattgcgccggaatctacgggccgtgta
aagccgactacagagacagttgactcactacttctcactgagtggcatatgctcagtctt
gtagggaaccgtgtgattgcgactaatcgtcttaccggcaatatggtgtctgaacatgac
gtccttgcaaccggtcagaaggctattgcgtttacaatggatatgcaagagcggactttt
tggcttattacgtcggatgagatttatgaaattgtggcacgggacgaagagagacatatc
tggcaaataatgatgaagaataggcaatttgattcggctttacagtatgcccgcactcaa
actcagaaggagactgtggcagcggcctacggagactatctggcgaaaaaaggtcattgg
actgaggcggctgttttatatgggcgaagcaacaaaccttttgaggatattgcgcttagc
attatcgacaataatcaaccggatgccttgagacagtttttgctgacgaagctggccaat
acgaagcaatcagcgactatgcaaagaatgattgtggctagttggctagtggaggttttc
atggcaaagctcaactcgcttgacgacaccatcattacgcaagccgagctgtcagaaacg
ttgaatccagcagagtcgaaaatgatgctcgagtcggtcaggaaggaatatcgcgacttt
gtcaacaggtacaagtccgaccttgatcgaaaaacagtctatgacattattagcagccat
ggaagagaaggagagcttctatactatgccaatgtgattggcgactacaactacgtcttg
tcgtactgggtgcagagagagcgctgggcagaggtcctggatgtgctgaagaggcagacc
gacgtcgaggtgttttaccgatacagcagcgttctcatgacgcatgttccgcaagaaatg
gttgagatcttgatgagacaatccgagttgacgcctcgcaatcttatcccagcactgctc
gagtacaatcgcaatttttcaggagacccgaactctcagaatcaggcagttcggtatctc
aactatgtcatttttcaactgaattccaaggatgcggcgattcacaacacgctggtttcg
atctacgcttcgcacgcgtcgaaagacgaatcagggctgctgtcttatctacaagcccag
ggagatgagccacgatatgatccagattttgcgctacgactatgcattcagcatcaccga
acgctctcttgcgtccacatctatacgagcatgggccagtacctccaagctgttgaccta
gcattgtcgcacaatgaggttgaacttgcggcagtcattgcagacagaccaatgtccaat
ccacaacttcgaaagaggctgtggttggcggtggcgcgcaaagttattgcgaaatcggac
ggcatcaaagcagccattgagtttctgaagagatgcgatcttctcaagattgaagacttg
atacccttctttcccgactttgtcgtgattgacgatttcaaagaggaaatttgccaagcg
ttggaagactactctcgaaacattgacaatttgaagaaggaaatggacgaatcatcacaa
acggcaagtaatatcaaaatggacattgcagcattagaccaccgatacgccattgtcgag
cccggagagaagtgctacgtttgcggcctgcccttgctcagcaggcagtttttcgtgttc
ccatgccagcactcctttcactcggattgcatgggcaaaaaggtcctcgagtactctggg
tacggaaactcgatgaaaatccgacagctccagacacagattcacaaagggatggtgagc
ggagcgcagagggaagcggtggttgctgagctggatgcgttggtagcttcggcatgtatt
ctatgcagcgactttgcaatcaagagaatagacgagccgtttataactacggatgataaa
cctgaggaatgggccgtttga
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