KEGG   Pochonia chlamydosporia: VFPPC_04434
Entry
VFPPC_04434       CDS       T09407                                 
Name
(RefSeq) F-box and WD repeat-containing protein
  KO
K03361  F-box and WD-40 domain protein CDC4
Organism
pchm  Pochonia chlamydosporia
Pathway
pchm04111  Cell cycle - yeast
pchm04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:pchm00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    VFPPC_04434
 09140 Cellular Processes
  09143 Cell growth and death
   04111 Cell cycle - yeast
    VFPPC_04434
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pchm04121]
    VFPPC_04434
Ubiquitin system [BR:pchm04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     VFPPC_04434
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_WDR5 Beta-prop_IFT122_1st WD40_Prp19 Beta-prop_THOC3 WD40 Beta-prop_WDR3_2nd WD40_CDC20-Fz WD40_WDHD1_1st WD40_Gbeta EIF3I Beta-prop_TEP1_2nd Beta-prop_SCAP DSE1_N Beta-prop_TEP1_C WDR55 Beta-prop_WDR36-Utp21_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_EML_2 Beta-prop_WDR41 Beta-prop_WDR75_1st Beta-prop_CAF1B_HIR1 Beta-prop_EML F-box-like NBCH_WD40 Beta-prop_SPT8 ASA1 WDR90_beta-prop_4th Beta-prop_DCAF4 TRM82_WD ANAPC4_WD40 CFAP251_N Beta-prop_ACSF4 Beta-prop_WDR90_POC16_2nd Beta-prop_VPS8 WD40_MABP1-WDR62_1st Beta-prop_Aladin Beta-prop_EIPR1 F-box PAC11 Beta-prop_NOL10_N Beta-prop_DCAF12 Vts1 Beta-prop_RIG_1st Beta-prop_LRRK2 Beta-prop_pof12 Beta-prop_HPS5 WD40_like F-box_COS111 WD40_CFAP43 Beta-prop_IFT140_1st PQQ_2
Other DBs
NCBI-GeneID: 28847785
NCBI-ProteinID: XP_018145014
UniProt: A0A179FRC9
LinkDB
Position
3:<1834757..>1837072
AA seq 678 aa
MDGYNRPMGFSERRGSILTEELALNTGNTTMSNPRIEKLPQQHARQMRGPPTPSMPTPAT
DFDQQLTGSPPPPPTPAASPGPAQCQPDWSDAADDEDFFLAKVRQHFKNCSGPQRTRVLA
DLLNLCTSQQLSFVHQFVSPLLKKDPFTSLPDELCLRILSFIDDPKVLARASQVSKRWRD
LLSDDMTWKNLCVKHDYGRRLSEINAPSPVLPMRSAAHALANADYDMVTSSSFPGSYPLS
GHNSGSRSFDGAMARPKLRSYKSHFKQRYLVEAAWRSGGTSVHRNITQEGGVVTSLHLTP
KYIIVALDNAKIHVFDTNGDSQRTLQGHVMGVWAMVPWEDTMVSGGCDRDVRVWDLKTGA
CLHTLRGHTSTVRCLKMADANTAISGSRDTTLRIWDIRTGLCRNVLVGHQSSVRCLEIKG
DIVVSGSYDTFARVWSISEGRCLQTLQGHFSQIYAIAFDGKRVVTGSLDTNVRVWDPTTG
ECLAILQGHTSLVGQLQMRGDTLVTGGSDGSVRVWSLEKMCPIHRLAAHDNSVTSLQFDD
TRVVSGGSDGRVKIWDLKTGHLVRELIAQGEAVWRVAFEDEKCVALALRQGRTVMEVWSF
SPPEEQLYERPLSLQQRILEDNPNRPLSAMALDYRAGEAAVAGSSRDNQDVDMQDAGPAA
GPSTAPLQGGNKTFFHDD
NT seq 2037 nt   +upstreamnt  +downstreamnt
atggacggctataaccgacccatgggcttttctgagaggaggggaagcatcttgaccgag
gagttggcactcaataccggcaataccaccatgagcaatccgaggatagagaagctgccg
caacaacacgctcgacagatgagaggaccccctactcccagcatgcccacgcccgcgaca
gactttgaccaacaattgacgggatcaccaccgccgcctcctacaccagccgcttctccg
ggtccggcgcaatgtcagcctgattggagtgacgctgcagatgacgaagatttttttctg
gccaaggttcgccagcactttaagaactgctcagggcctcaacgcacgagggtcctggcc
gatttgctcaacctttgcaccagtcagcagttgagcttcgtacaccaatttgtcagccca
ctgctcaaaaaggatccctttaccagcttaccggacgaactgtgcttgaggattttgtcc
tttatcgatgaccccaaagttttggctcgggcttcacaggtatcaaaacgatggcgagac
ctcctcagcgacgacatgacatggaaaaacctttgcgtcaaacacgactatggccgccga
ttgtccgaaatcaacgccccatcgccagttttgccaatgaggtcggctgcgcatgctctg
gccaatgccgactatgatatggtaaccagcagcagctttcccggttcctatccgctttct
ggacacaactctggatccagaagttttgacggcgccatggcacgacccaagcttcggtcg
tacaaatcccactttaaacagagatatttggtcgaggccgcatggagatcaggcggaacc
agtgttcaccgcaacatcacgcaggaaggtggcgtcgtcaccagcttgcatttgacgcca
aaatacatcatagtggctctagataacgccaagattcacgtatttgacacaaatggcgac
tcccaacgcacattacagggacatgtgatgggagtctgggccatggtgccttgggaggat
accatggtgagcggtggttgcgaccgtgacgtccgcgtatgggaccttaagaccggcgca
tgtctccatacactgcgtgggcacacttctacggtgagatgcctcaagatggctgatgcc
aataccgccatctctggctctcgcgatacgactcttcggatttgggatataagaacaggg
ctgtgccgcaatgtactggtcgggcatcagtcgagcgtacgatgcttagaaatcaagggc
gacatcgttgtttcaggcagctatgatacctttgcaagagtatggagcatctcggaaggg
cgttgtcttcagaccctgcaaggtcactttagccagatatacgccattgcttttgacggg
aagcgagtagtcactggcagtttggataccaatgtccgggtttgggaccctaccactggt
gaatgtctcgcgatcctgcaaggtcatacatcgctggttgggcaattgcaaatgcgtgga
gacactcttgtcacaggaggatctgatggatcggttcgagtttggtcactggaaaagatg
tgtcctattcatcgtctcgccgcgcacgacaacagcgtgaccagcttacagtttgatgat
accagagttgtcagtggaggtagtgatggccgtgtcaagatttgggatcttaaaaccggt
cacctcgtccgagagctcatcgcccaaggagaagcagtctggcgagttgcatttgaagac
gagaagtgcgttgctttggccctgagacaaggtcgcacagtgatggaggtttggtcattc
tcgccacctgaagaacaactctatgagcggccgctgtcacttcaacagcgcatcctcgag
gataacccaaaccggcctttgagtgccatggcactcgactatagagctggagaagcagct
gttgcaggatcaagccgtgataaccaagacgtcgacatgcaagatgctggacctgcggca
ggcccatccacagcaccgctgcagggcggaaacaaaacgttctttcatgacgactag

DBGET integrated database retrieval system