Pochonia chlamydosporia: VFPPC_04465
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Entry
VFPPC_04465 CDS
T09407
Name
(RefSeq) DEAD helicases superfamily protein (Aquarius)
KO
K12874
intron-binding protein aquarius
Organism
pchm
Pochonia chlamydosporia
Pathway
pchm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pchm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
VFPPC_04465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pchm03041
]
VFPPC_04465
Spliceosome [BR:
pchm03041
]
Complex B
Other components
Prp19-related factors
VFPPC_04465
Complex C
VFPPC_04465
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Aquarius_N_1st
Aquarius_N_2nd
Aquarius_N_3rd
AAA_12
AAA_11
ResIII
AAA_19
AAA_30
AAA_16
AAA
AAA_22
DEAD
DnaB_C
nSTAND3
SLFN-g3_helicase
NB-ARC
UvrD-helicase
SMC_N
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
28847808
NCBI-ProteinID:
XP_018145046
UniProt:
A0A179FRE2
LinkDB
All DBs
Position
3:<1940634..>1945320
Genome browser
AA seq
1444 aa
AA seq
DB search
MPTAKRLKGSRAAAAGAGQAREPARNVETERPTPAEVEQEEHQFVQLARKNWLKPGKKAA
KTKVKNDVLKQGIWDVLEQDGFQYKSLLLLESLQTMESYLWPGYTDQASNFHVLLIALIA
NVKRREHLETWSLFEDRPEDFSSMFRRILSLMLDRTLSTAIRTHLLCFLIYAFQSLDCAI
VRKECAPLVSIGIWQNLSSETQREALLDQNTHLRKAWRASQKRYDAADDAIKARLRFERS
WLYSLLLDFLGLLYDDATKSDQALYCERFTEFISDLQSQLPTRRYVNTLLQDLHILPLMK
ISPVYNDENNSLLRDLHALLSHYTHFAIDDQTGIQLTATEAYDKHCAILGKLQRVALKHF
KEKLMVLALSNYGGIEKRDELESLLEPLADDELTQLFTLLDMRSTYPESLALPIDRKLLT
EIMLSKFERKKTFRETARYMPLLPTERTLFDNGFQRADAYDGSHPLALPKLNLQYLSAGD
FLWRAMILYRCEAFYGIRKDVESALRRLRPESKQPGVINFAGFSKMAMPISKPSILEVTP
PLVGEELPSMVKAEISIDVRRLGQNVRREWDSLRPDDVVFLLSVEPAPSEASVNGGEIQS
EYEKLGIKSIRAAEILSITDDKGRHVRDGSMGLDNKRKVQLKLDTYMYARDSERAAAGKT
DVYGQVNLLLRRGRRENNFRPVLESIRKLVLSEMPLPSWLYEVFLGYGDPAGANYKNLSN
RIKKLDYRDTFLDWQHLVESLPGKTVEPGDDVSGSFGPPYVLEEADKAETANGARPSKKR
RRDAEPTMKSDVDALKVSTYKPPNNGPYPVDAPKLNSVRFTPAQIEAVMSGSQPGLTVIV
GPPGTGKTDVATQIINNIYHNFPQEKTLLIAHSNQALNQLFAKIVALDIDERHLLRLGHG
EEDLDTDGSFSKHGRVESFLDNRQTYLQEVRKLASSLGAPGAHDNSAETAGYFGKVYVEP
AWKRFQQAALSAETTAADLVKAFPFHVYFADAPQPLFPEDADRESTLDIANGCYRHISKI
FSELADIVPFEILRREREKANYLLTNEARIIAMTTTHAAIRRSEIASLGFHYDNVVMEEA
AQITEVETFMPLAMQKPTNNQMPLKRVVLCGDHLQNSPVIQSLAFRHYANLEQSLFSRLV
RLGVPTVNLDQQGRARPSIANLYRWRYPKLDDLPHVQSRPEFLKGNSGFKFDYQFINVPD
YKGRGESEPTPHFIQNLGEAEYAVALYQYMRLLGYPAEKISILTTYAGQRALVKDVLAHR
CAKNPVFGLPKAVATVDKYQGEQNDYIILSLTRTSRVGYLRDVRRMTVAVSRARLGLYIL
GRREVFEACPELRPAFDLLLQRPDKLMLVTSEMWPTERANTEDNSEVEGEVAMENVEHLG
QYVFEMTNTRLKQIQEQGADSVNAPETIVEEADKDAEAQATYYDEDDKDVEPDILEVREG
ENKN
NT seq
4335 nt
NT seq
+upstream
nt +downstream
nt
atgcctaccgccaagcgcctcaagggcagtcgtgcagctgcagccggtgctggacaggcc
cgcgaacccgcccgcaatgtcgaaacagaacgtccaactcccgccgaggtcgagcaagag
gaacaccaatttgtccaactggcgaggaagaactggttaaaacctgggaagaaggcagcc
aaaaccaaggtcaagaacgacgttttgaagcagggcatctgggacgtgctggagcaggat
ggcttccaatacaagtcgctactcctgttggagagcttgcagacaatggagagctacctg
tggccaggatacactgaccaagcgtccaatttccacgttctcttaatcgcactgatagcc
aatgttaagcggcgcgaacatttggaaacatggagtctatttgaagatcgaccagaggat
ttctcgtccatgttccgtcgcatcctttcgctaatgctcgatcgcaccctttcgacagcc
attcgaacacaccttctctgcttcttaatttacgctttccagagcctcgactgcgctatc
gtcagaaaggaatgtgcgcctctggtatctataggcatctggcagaacctgtctagcgaa
acgcaacgagaggccttgctggaccaaaatacccatcttcgaaaggcctggagagcatcg
cagaaacgatatgatgcagcagatgatgccatcaaagctcgccttcgtttcgagagatct
tggctctattctctcctgctagactttctgggtctattgtacgacgatgctactaaatct
gaccaagctttgtactgcgagagatttaccgagtttatatctgatttgcaaagtcagcta
cctacaagacgctatgtcaataccctgctacaggatttgcacatactgcctctcatgaag
atttcgccagtatataatgacgagaacaattcgttactgcgcgatttgcatgcccttctg
tcgcattacacacacttcgcaattgacgatcaaacaggaattcaattgactgcgacagaa
gcatatgacaaacattgcgcaatcctcgggaaactacaaagggtagcgctcaagcatttc
aaggagaaacttatggttctagccctttcaaactatggcggaattgagaagcgagacgaa
cttgagagtcttcttgagcctttggcagacgacgagcttacacagctcttcacacttctc
gacatgagatccacatatcccgaatctctcgcactccccatcgatcgcaaactgcttacc
gagatcatgctgagcaaatttgagcgaaagaagactttccgcgagactgctcggtatatg
ccgttgcttcccaccgagcgcaccttgtttgacaacgggttccagagagctgatgcctac
gatggatctcatccccttgctctacccaagttgaacttgcagtacctatctgctggtgat
ttcttgtggagagcaatgattttgtatcgttgtgaagcattttacggcattcgaaaggac
gtagaatcagcattgcgccgcctgcgacccgagtccaaacagcctggcgtgataaacttt
gcaggattctcaaaaatggccatgcctatttcgaaaccatcaattctggaagtaaccccc
cctttggttggtgaagaacttccgtccatggtgaaagccgagatctcgattgatgttcga
cgcctcggacagaacgttcgaagggaatgggacagtcttcgccctgatgatgttgtgttt
ctgttgtctgtcgagccagccccctccgaagcttctgtgaacggcggtgagattcagtcc
gaatatgagaagctgggcattaaatcgattcgagctgccgagatactaagcatcacagat
gacaaagggcgccatgtcagagatggttcaatgggcctcgacaacaaacgcaaagtgcaa
ttaaagctagacacgtacatgtacgccagagactcagagcgtgccgcggcaggcaaaacc
gacgtctacggccaagtcaatctgttactgaggcgagggcgaagggaaaacaacttcaga
cctgttttggagtctatccgcaaactagttttatcggaaatgcctctcccatcctggcta
tacgaagtcttcctaggctatggcgatccggcgggagcaaactataagaacctttctaat
cgcatcaagaagctcgactaccgggatacctttctcgactggcaacatctggttgagagc
ttgcctggcaagactgttgagccgggtgacgatgtgtcaggcagctttggtcccccctac
gttctcgaagaagccgacaaggcagaaacggccaatggagccagaccatccaagaagcga
cggcgcgatgcagagcccacgatgaagtcggacgtcgatgcgctcaaagtatcgacatac
aagcccccaaacaacgggccctatcccgtggacgcgccaaagttgaattctgttcgattc
acccctgcgcagattgaagcagtcatgtctgggtcgcagcctgggttaactgtgattgtc
ggtcctccaggaacaggcaagacggacgttgccacacaaatcatcaacaacatctatcac
aacttcccacaggagaagactttacttattgcacacagcaaccaagcactgaaccaacta
tttgccaagatagtggcattggacattgacgagagacacttactccgtttaggacatgga
gaagaggatctagacacggatggaagctttagcaaacacggccgtgttgaatcatttctc
gataacagacaaacgtacctgcaagaagttagaaagcttgcttcgagccttggtgcaccc
ggtgcacatgataactcagcagagaccgctgggtactttggcaaagtctacgtggaacct
gcgtggaaaaggtttcagcaagctgccctgtcggccgagacgacggctgcagatctcgtc
aaggctttcccattccacgtctactttgcagatgcgccccaaccattattcccagaagat
gctgatcgcgaatcaacgctggacattgccaatggctgctaccgccacattagcaagata
ttttcagaattggccgacatagttccgtttgagatccttcgccgcgaacgagagaaggcc
aattacttgcttacgaatgaggcgaggattattgccatgaccacgacccacgctgcaatt
cgacggagtgagattgcctcactgggcttccactacgacaatgtcgtcatggaggaggcc
gcacagatcaccgaagttgaaacatttatgcctctggccatgcaaaagccaacgaataat
caaatgccgctgaagagggtggtgttgtgcggtgatcatctgcagaattcgcccgttatt
caaagcctggcattccgacactatgccaatttggagcagtccctgttttcccgtctcgtc
cgacttggcgtcccaaccgtcaacctggatcaacagggacgagctcgtccgtcaattgca
aatctttaccggtggcgttatcccaagttggacgacttgccacacgtccaaagccgacct
gaattcctcaagggcaattctggcttcaaatttgattaccagttcatcaatgtgcctgat
tataagggacgtggagaatcagagcctacaccccattttatccaaaacctaggcgaagca
gaatatgcggtggctctctatcagtacatgcgtttgctaggataccctgcggaaaagata
agcattcttacaacgtatgctgggcagcgagccttggtcaaggacgtgcttgcccacaga
tgcgccaagaatccggtgtttggtcttcccaaggctgttgccacggtcgacaagtatcaa
ggcgaacagaatgattatatcatcctctcgctaacgcgaacctcgcgggttggctacttg
cgggacgttcgccgtatgactgtggcagtatcgcgtgctagacttggattgtatattctc
gggcgacgagaggtttttgaggcgtgcccggagctccggcctgcctttgacctactcctg
cagcggccagacaagctgatgcttgttacaagtgagatgtggccaacggagcgagccaat
acagaagataattcagaggtggaaggagaagtggccatggaaaacgtcgaacacttgggg
caatacgtgtttgagatgaccaataccagactcaaacagatacaagagcagggcgccgac
tctgtgaatgcaccggaaacgattgtggaagaggcagacaaagatgcggaggcacaagct
acatattacgatgaagatgataaggatgtagaaccggatatactggaggtccgcgaagga
gaaaacaagaactag
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