Pochonia chlamydosporia: VFPPC_04533
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Entry
VFPPC_04533 CDS
T09407
Name
(RefSeq) cohesin complex subunit (Psm1)
KO
K06636
structural maintenance of chromosome 1
Organism
pchm
Pochonia chlamydosporia
Pathway
pchm04111
Cell cycle - yeast
pchm04113
Meiosis - yeast
Brite
KEGG Orthology (KO) [BR:
pchm00001
]
09140 Cellular Processes
09143 Cell growth and death
04111 Cell cycle - yeast
VFPPC_04533
04113 Meiosis - yeast
VFPPC_04533
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pchm03036
]
VFPPC_04533
Chromosome and associated proteins [BR:
pchm03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
VFPPC_04533
Meiosis-specific proteins
Cohesin complex and associated proteins
VFPPC_04533
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_29
FPP
FliJ
ABC_tran
Motif
Other DBs
NCBI-GeneID:
28847871
NCBI-ProteinID:
XP_018145138
UniProt:
A0A179FSQ3
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All DBs
Position
3:2202278..2206141
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AA seq
1245 aa
AA seq
DB search
MSDFKSYKGHHTLLFGDSYFTSIIGPNGSGKSNSMDAISFVLGIKSSHLRSAHLKDLVYR
GRVLKTSKINDDGSAETQSNGNTATTADDKASRGDPKTAWVMAVYEDDAGDEQRWKRSIT
SSGASEYRINDRVVTAQQYNEALEYENILMKARNFLVFQGDVEAIASQSPQDLTRLIEQI
SGSLEYKTEYEKLQADAEEAAENQNFQLHRRRGINSEIKQYREQKKEADSFQRKTEERDA
AIVSQCLWKLYHFQKAMDESSAAIQDHQEDLKELKRNVESFEARLDDARRDQNTVGRMVS
RAEKEIRLKERSIEDKENALVPFDEKVHESSQQVEKLLAQSQKVTKERDEQASIVAKVQK
DIESVHKAQTMFEKETKEQMRKQGRDISDADRKEYNILRAQVMSRSGANQAKLENLERQR
KADEVTVNNLRGKLDTITAAIEKSEAEVQNIGERRSSAEAASKEVSDEIASKKKEFNQLQ
SERVRTNQKRTELEEKLEDVARKLREADDGRRQNDRETRTKEMVTSLKRMFPGVRGRIGD
LCTPKQKKYDEAVIVALGKDFDSVVVDTEKVGVDCVQYLKEQRFPPMTFIPLDNIKVNAV
NTAIKGFSGARLTIDTINFDTSVERAVAYACGSSVVCDSLTIAKHICYDKKIPVKAVTLE
GYIIHKAGLMTGGRGPEPKGGKRKFEEVDVQNLQRMATKLRDELDRLPKSDRRGAQEESL
QIDLAGLERRFSAIKDESAAFSKNWTSKKRELDSYKRELRDLQPKYKEQASQLESGNATV
NEFRTAIARVEDEVFADFCRKLGYSDIRAYDASQGKLEQEVSEKRNQFDVQKQRLENRVK
WELTRHGDTETRIRRMQDHIRRLKQDIKSYSNEKAEIEKAIRQDQDELDALRDTLEEQKA
ELADKNQRVSEARTELQKRSKDIEARQREINSLETTVQKNSASKSALLRRCRLEQIQIPL
VEGTLDNLPNEDDLLRQDPDAMDVDDEEEDMMDIALDDHGIAINFDGLDGELKESDDPEV
EEKLTEKISALALELEKLNPNMRAMERLESVESRLKQTDQEYEDSKTAAQVAKDAFAKIK
QTRYDLFNKAFTHIQEQISHVYKDLTRSEAYPLGGQAYLDIEEDTDMPYLSGIKYHAMPP
LKRFRDMEHLSGGEKTMAALALLFAIHSYQPSPFFVLDEVDAALDNANVDKIKKYIREHA
GPGMQFIVISLKTGLFQDSESLVGVYRDQEVNSSRTLTLDVSGIP
NT seq
3738 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacttcaagtcctacaaagggcatcacacgcttctctttggagattcgtatttt
acctcaataattgggcccaatggatcgggaaagtcgaattctatggatgcgatatccttt
gtactgggtatcaagtcctcacatcttcgctcagcacatttgaaggatcttgtttatcgt
ggccgagttttgaaaacctccaaaataaatgatgatggctctgcggaaacccagagcaat
ggcaacacagcgaccacagccgatgacaaagcttcccgtggagatcctaaaaccgcctgg
gtcatggcagtgtatgaagacgatgccggtgacgagcagcgatggaagcgctccataacc
agttctggagccagcgaatatcgtattaatgacagggttgttacagctcagcagtacaac
gaagcgttggaatatgaaaatattcttatgaaggcccgcaactttctcgtatttcaaggc
gacgtagaggctatagcgtcgcaatccccgcaagaccttactcgcctgatcgaacaaata
tccggtagcttggagtataagactgagtatgaaaaacttcaggctgacgccgaggaagct
gctgagaaccaaaatttccaactgcatcgccgccgtgggataaattctgaaataaagcaa
tatcgggagcaaaagaaggaagccgacagtttccaaaggaagaccgaagaacgggacgca
gccatcgtttcgcaatgcctctggaaactctatcattttcagaaagccatggacgaatcc
agtgctgctattcaggaccaccaagaggatttgaaggagctgaagcgtaatgtcgaatct
tttgaagcacgattagatgatgctagacgggatcagaacactgttggccgtatggtgtct
cgtgcggagaaggagattagactgaaggagcggagtatcgaagataaagaaaacgctctg
gtgccttttgatgagaaggttcatgaatcctcacagcaggttgaaaagcttctggctcaa
agtcaaaaggtgacgaaagagcgagacgagcaagcctccattgttgcaaaggtccagaaa
gacattgaaagtgttcataaggcacagactatgtttgaaaaggagacgaaagagcagatg
aggaagcaaggacgagatatcagcgatgcagatcggaaagaatataacattttacgggca
caggtcatgtctcgttccggggcaaaccaagcaaagctggagaacttggaacgacaacgc
aaagcagatgaggttaccgtcaataatcttcgaggcaaactcgacacaatcacagcagcc
atagaaaagtccgaggcagaggtacaaaatattggtgagcgtaggagctcggccgaagca
gcgtccaaagaagtttccgacgagatcgcaagtaagaagaaggaattcaatcaactgcag
tccgaacgtgtgcgaaccaaccagaaacggactgaacttgaagagaagcttgaggatgta
gctcgtaagctacgagaagccgacgatggacgtcgccagaatgaccgtgagactcggacg
aaggaaatggtcacctccttgaagcgcatgttcccgggtgtgcgtggtcggattggagac
ctatgcactccgaaacagaagaaatacgacgaggctgtgattgtggccttaggcaaggac
ttcgactcagtagtcgtagacactgagaaggttggtgtggactgtgtccagtatttgaaa
gagcagcgatttccacccatgactttcattccactggacaacatcaaggtcaacgccgtg
aacacagctattaaaggcttctctggcgcgaggctaaccatcgataccatcaatttcgat
acatccgttgagagagcggtggcttacgcctgtggaagctctgtggtttgtgattccttg
acgattgccaaacatatatgctacgacaaaaagattcctgtaaaagctgtcaccctcgag
ggctacattatccataaagcaggtcttatgactggtggacgtggcccagaacccaaggga
ggcaagcgtaaattcgaagaagttgatgtgcagaatcttcagcgaatggcaacaaaactg
agggatgaattggacagactgcccaagtctgatcgtcgtggtgcgcaagaagaatcttta
caaatcgacctggccggcctggaacgacgttttagtgccatcaaagacgaatcggctgcg
tttagtaagaattggacgagtaaaaagcgggagcttgacagttacaagagggagttgagg
gatcttcaaccaaaatacaaagaacaggcgtcgcagttggagagcggcaatgccactgtc
aacgaattcaggactgcgattgcccgtgtggaggatgaagttttcgccgatttctgcagg
aagcttggatatagcgatattagggcatacgatgcctcccagggcaaattggagcaagag
gtgtctgaaaagaggaatcaatttgacgtgcagaagcaacgattggagaatcgggtcaaa
tgggagctgacaaggcatggtgatacggaaacgcgtattcgacgtatgcaagatcacatt
cggcgcctgaagcaagatatcaaatcttattcaaacgagaaagctgaaatcgaaaaagct
attcgtcaagaccaagacgaactagacgcattgcgggacacattggaggagcaaaaggct
gagctggcagataaaaaccaaagagtgagcgaagcaagaactgaattgcaaaagaggagc
aaagacatcgaggcacggcagcgtgaaatcaactccctggaaacaactgtacagaagaat
agtgccagcaagtcagccttgctgcgaagatgtcggcttgagcagattcagatcccgttg
gtagaaggtacattggacaaccttccaaacgaagatgatctcctacgacaggaccctgac
gctatggatgttgatgacgaggaggaggacatgatggacattgcgctggacgaccatggt
attgccatcaacttcgatggcctcgacggtgaattgaaagagtctgatgatccggaagtc
gaagaaaagttaacagaaaaaatttcggcccttgcgttggaactcgagaagctgaacccg
aacatgcgagcaatggaacgcctggaaagtgtcgagtcaagattgaagcagacagaccaa
gaatatgaggattccaaaacggcggcacaagttgccaaggatgcttttgcaaaaatcaaa
cagacgcgatatgatctcttcaacaaagcctttacacacattcaagagcaaatttctcac
gtgtataaggaccttacacgatccgaggcgtatccgttgggtggtcaagcatacctcgat
attgaagaggatacagacatgccgtacttgtcgggcattaagtatcatgctatgccgcct
ctaaagcggttcagggacatggaacatctatctggcggagaaaaaaccatggcagccctg
gccttgttattcgccattcacagctatcagccaagcccttttttcgtgctggacgaagtc
gatgctgcactcgacaatgcaaacgtcgacaagataaaaaagtacatccgtgagcacgct
gggccaggaatgcaatttatagttatcagcctgaaaacgggactattccaagattcagaa
agtcttgtcggcgtatatcgagaccaggaggtgaacagttcaaggacattgacattggat
gtgagtggaatcccctaa
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