Pochonia chlamydosporia: VFPPC_04544
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Entry
VFPPC_04544 CDS
T09407
Name
(RefSeq) RNA polymerase II, large subunit
KO
K15559
regulator of Ty1 transposition protein 103
Organism
pchm
Pochonia chlamydosporia
Brite
KEGG Orthology (KO) [BR:
pchm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pchm03021
]
VFPPC_04544
Transcription machinery [BR:
pchm03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
VFPPC_04544
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GFIT
Motif
Pfam:
CID
CTK3
MCD_N
Motif
Other DBs
NCBI-GeneID:
28847880
NCBI-ProteinID:
XP_018145151
UniProt:
A0A179FT35
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Position
3:2243809..2245175
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AA seq
384 aa
AA seq
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MAYNDDSVLARLSSLNESHDSIATAAQWIMFHRRHADRTVQLWMQRLKDSSSTKRLSLVY
LANEVVQQSRIRHKEDFVIAFSPIIAEASSIAYKGAPAEIQAKLRRVIDVWKDRSIFEVP
IQKAIESRLDDLDKARGTPRSGFTGSPFGTSSVPSEIAPLVTSHQKIAKLSGPLPNAISS
ANQEYQKQMDPEVAVPSAPVYAARLNGLLKTLANAESAVAECVKARESLVSALEKLLDEN
RTTLDADRKAAAELLQRKMEIEDKKQQVEIAIMRALGPAEGNGLSGEGDSGSPHTELDRP
EMEALTPPPLDDEPGAEHLEASEMAPVEPSAEQDSGNSYQSVSISSNGSKKRRRVDDPAD
FPDLGGDDGIDPEVVEMLKESAEA
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atggcatacaacgatgattcggttctggcgcgattgtcgtcattgaatgaaagtcacgac
agcatcgccaccgctgcccaatggatcatgttccatcggcgtcacgcggatcgcactgta
cagctatggatgcagcgcttgaaggattcctccagtacgaaacgactgagtttggtatat
ctcgcgaatgaagttgttcaacaatcacgaatacgccacaaggaggattttgtcatagca
ttctctcccataatcgccgaagcctcgtccatagcatacaagggcgcacctgcagaaatt
caggcgaaacttcgacgcgtcatcgacgtctggaaggacaggtctatctttgaagtacca
attcaaaaggccatcgagtcccgtcttgatgatcttgacaaagctagagggacaccgagg
tctggatttacaggttctcctttcgggacatcgtctgtgccatccgagatcgctccgctc
gtcacttctcatcaaaaaattgcgaagctcagtggacctttgccgaacgcgatttcttcc
gcaaatcaagaatatcagaaacaaatggatcccgaagttgccgtaccatcggctccggtg
tatgccgctcggctaaatggacttcttaaaacccttgcgaatgcagagagcgctgtcgca
gaatgcgtgaaagctcgagaaagcttagtatccgctttggagaaacttttggatgaaaac
cggactactctagacgcagacaggaaggcagctgcggaattactccagagaaagatggaa
atcgaagataagaagcagcaggtagaaattgctattatgcgagccttaggacctgcagag
ggcaatggtttatctggagaaggcgactcaggcagcccacatactgaactagaccgacct
gagatggaggctctcaccccccctcctctggacgatgaacccggggccgagcatcttgag
gcatccgaaatggctcctgttgagccatctgcagaacaagactcgggaaattcatatcaa
tcggtctctatttcttcaaatggatcaaaaaaaagacgaagggtggatgaccctgcggac
tttcccgatcttgggggagatgatggtatcgatcccgaggttgtagaaatgttgaaggag
agtgctgaggcatag
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