Pochonia chlamydosporia: VFPPC_04579
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Entry
VFPPC_04579 CDS
T09407
Name
(RefSeq) nonsense-mediated mRNA decay protein
KO
K20223
importin-7
Organism
pchm
Pochonia chlamydosporia
Pathway
pchm03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pchm00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
VFPPC_04579
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pchm03009
]
VFPPC_04579
Ribosome biogenesis [BR:
pchm03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
VFPPC_04579
Pre-60S particles
VFPPC_04579
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IBN_N
Cse1
Xpo1
DUF5682
TPR_IPO11
GRIP
TPR_IPO5
TPR_Trm732_C
Cnd1
MOR2-PAG1_C
Motif
Other DBs
NCBI-GeneID:
28847909
NCBI-ProteinID:
XP_018145187
UniProt:
A0A179FSJ9
LinkDB
All DBs
Position
3:2360528..2364577
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AA seq
1055 aa
AA seq
DB search
MDTAALRGLLLGSLSTDADSRRRSELQLKQVEEQPGFVDALFDILQSERDASVRLSTVIY
IKHRVNRAWYQTEQYSGEFIIPEDEKSRVRDRLVPVLAASDGSVRQQLIPVLQRVLQCDF
PSRWPRFMDFTTELLNTNTPSSVLAGLQCLLAICRAFRYKSHDNQDRAQFDTIVENSFPR
LLVICNELVNQESDEAGEMLHLALKSYKHATWLELSSYLRQQQVNIAWCTVFLQTVSKVA
PPNAMQGDSFDREKHHWWKAKKWAFFNLNRLFIRHGNPASPGKGDEAAEFAKNFISTIAP
EILKHYLQEIEKWVAKTSWLSRPCLSYVIVFLDESVRPKEIWTHLKPHLTNLVTHFIFPV
MCLSEEDAEQFDDEPEEYLHRKLNYFEEASAPDVAATNFLVNLTKNRRKETFEILKFVNA
VVNDYEQAADDKKNHMAKEGALRMIATLAPVILSKKSPIADQVEYFLVRYVFPDFTSSQG
YLRARACDTIEKFEQLNFQDQNNLLTIYRHILDCMADPALPVRVTAALALQPLIRHDVIR
TSMQQSIPTIMQQLLKLANEVDIDALANVMEDFVEIFATELTPFAVALCEQLRDTYLRIV
RELLEKESKAGEDGELYADYDDKSITALGVLQTIGTLILTLESTPDVLLHIEAVLMPVIK
VTLENKLYDLYNEVFEIIDSCTFAAKGISPNMWQAFELIHTTFKAGAEYYLEDMLPALDN
FVQYGTPELIQNPEYIQALYSMVADMFTDQVQGGVERICACKLAEAMMLSLKGHIDSCIE
GFINMAMNILATQEVKIKSYKIHLMEMVINAIHYNPLLTLQVLENKGWTNRFFSLWFGSM
TSFSRVHDKKLCIVAISALLGVNHEQVPASVSVGWPRLLQGITELFRTLPNALKNREEAL
RDDFHLETSYDYGDEDEWDESEANWNGEEEETNEEEPLESKDESKAYLEFLNDEAQKYSR
AIEDVDDDELGEDSVLLDSPLDKVEPYSLFKNTLLKMQQEQPQFYNNLAGHLSAEEQNVL
QTIMAKADEMLADYESQLRLLQEQNARAATGAPAS
NT seq
3168 nt
NT seq
+upstream
nt +downstream
nt
atggatactgctgcgcttcggggcctgctcttgggcagcttgtccaccgatgccgacagc
agacgacggtccgagctacagctgaagcaggtcgaagagcaacccggcttcgtcgatgcc
ctgttcgatattctacaatccgagcgggatgcaagcgtgcgcctatcgactgttatttac
attaagcaccgtgtcaatcgcgcatggtaccagaccgaacagtattctggcgaattcata
atacccgaggatgaaaaatctcgcgtccgagaccgcttggtcccggtcctggccgcctcc
gatggttctgtgcgccagcagcttattcccgtgcttcagcgcgttctgcagtgtgatttc
cccagcagatggccgcgtttcatggatttcaccactgagctgttaaacaccaataccccc
agttcagttctcgctggacttcagtgcttgttggcaatatgtcgtgccttcaggtacaag
tcccacgacaaccaagacagagcacaattcgataccattgtcgagaacagcttcccgcgc
ttgcttgtcatctgcaacgagctcgtgaatcaggaaagcgacgaggccggcgagatgctt
caccttgccctcaaatcttataaacatgcaacatggctcgagctttctagttacttgcga
cagcaacaggtgaatattgcatggtgcactgtattcttgcagacagtgtcaaaagtcgca
ccccccaatgctatgcagggcgattcgttcgatcgcgagaagcaccactggtggaaggcc
aagaagtgggctttcttcaatctgaataggctctttattcggcacggaaacccggccagc
cctggaaaaggtgacgaggctgcagaattcgccaagaacttcatcagcacaatcgctcct
gaaattctcaagcattatctccaagaaattgaaaaatgggtggccaagacatcctggctc
agccgaccttgcctctcctacgttatcgtatttctagacgaatctgttcgccccaaggaa
atctggactcacttaaaaccccatctcaccaaccttgttacccacttcatcttccccgtc
atgtgcctctctgaggaagatgccgagcaattcgacgatgaacccgaggaatacttgcat
cgcaagctcaactactttgaagaagcatctgcccctgacgtggccgccacaaatttcctt
gtgaaccttacgaaaaaccgccggaaagaaacattcgagatccttaaatttgtcaacgcc
gttgtcaacgattatgagcaagccgctgatgacaagaagaaccacatggccaaggagggt
gccctgcgtatgattgcgactctggcaccagttatcctgagcaagaagagccccatcgct
gaccaggttgaatactttctcgtgcgatatgtgttccctgattttacaagcagccagggt
tatctccgcgctcgtgcctgtgataccattgagaaatttgagcagctcaacttccaggac
cagaacaatctgttgactatctatcgacacattctggattgtatggcggatcccgccctc
ccagttcgtgtgactgctgccttggcgttgcagcctctcatcagacacgatgtcattcgc
accagcatgcagcagagcattccaaccatcatgcagcaacttctgaaattggccaatgag
gtggacatagatgcgctggccaatgttatggaggactttgtcgaaatctttgccacagaa
cttaccccgtttgctgtcgcgctgtgcgagcaactacgagatacttaccttcgcatcgtt
cgtgagcttcttgagaaggagagcaaagctggagaggatggcgagctgtacgcagactac
gacgacaagagcatcactgctcttggtgtattgcaaacaattggcactttgatcctcaca
ctggaaagcacccccgacgtccttctccatattgaggcggttctcatgcccgtaatcaag
gtcactctggagaacaagctttatgatctgtacaatgaagtctttgaaatcatcgacagt
tgcactttcgctgccaagggtatctcgcccaacatgtggcaagcattcgagcttattcac
actaccttcaaagccggcgcagagtactacttggaggacatgcttccggcattggacaac
tttgttcaatatggcacgcccgagctcattcagaatcctgagtacatacaagccttgtac
tcgatggtcgctgacatgttcaccgatcaggtccaaggcggcgtcgagcgaatttgtgcc
tgcaagcttgcggaggccatgatgctcagtctcaagggtcacattgatagctgcattgaa
ggcttcatcaatatggctatgaatattctggcaacccaggaagtgaagatcaagagctac
aagattcacctcatggaaatggtcatcaacgcgattcactataatccattgctaaccttg
caggtgctcgagaataagggttggacaaatcgtttctttagcttgtggtttggcagcatg
acatccttcagccgggtgcatgataagaagctctgtatcgtcgccatctccgctctgctt
ggcgttaatcacgaacaagtgcctgcaagtgtgtctgtcggttggcctaggttactgcag
ggcattacggagttgttccgaactctgccaaatgccttgaagaatcgcgaagaagccttg
cgcgacgatttccaccttgagacgagctacgactatggcgatgaggatgaatgggacgaa
agtgaagccaactggaatggcgaggaggaagaaactaatgaggaagagcctctggaatca
aaggatgagagcaaggcatatctcgaatttttgaacgatgaggcccaaaagtatagccga
gccatcgaagacgtcgacgacgacgagttgggcgaggacagtgttctgctagactcccct
cttgacaaggtcgaaccgtattcgcttttcaagaatactcttctaaaaatgcaacaagaa
caacctcaattctataacaacctcgctggacatctttcggctgaggagcaaaatgtgctt
cagaccatcatggcgaaggctgatgagatgcttgccgattacgagtcacaactgcgactg
ttgcaggagcaaaatgcgcgcgcggctactggtgctccagcaagctaa
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