Pochonia chlamydosporia: VFPPC_04595
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Entry
VFPPC_04595 CDS
T09407
Name
(RefSeq) DNA lyase
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
pchm
Pochonia chlamydosporia
Brite
KEGG Orthology (KO) [BR:
pchm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pchm03400
]
VFPPC_04595
Enzymes [BR:
pchm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
VFPPC_04595
DNA repair and recombination proteins [BR:
pchm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
VFPPC_04595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-GeneID:
28847923
NCBI-ProteinID:
XP_022284480
UniProt:
A0A179FT30
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All DBs
Position
3:complement(2450738..2453018)
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AA seq
670 aa
AA seq
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MGFRITTWNVNGIRNPFGYQPWREQRTFQAMFEILESDIVIMQETKIQRKDLQDDMVLVP
GWDVFFSLPKHKKGYSGVAIYTRNATCAPIRAEEGITGVLCPPRSMTKFRDLPSDQQIGG
YPRPGQLSGIVEDTVLDSEGRCVILEFPAFVLLGVYSPANRDESRDEFRTSFFEALDVRI
RNLVAEGKQVILTGDLNVIRSEMDSTNVLETLRKENMTLEEWLSLPTRRIFNQLIFEGNI
VGDYDEGRESAVLWDLCRCFHPDRLGMNTCWDTKRNTRPANNGSRIDYILCSQGIKDWFT
FASIQEGLMGSDHCPVFATIADTVSFKDNQVCLSDVMNPIGMFKNGKRMRDLVQKDILPL
SAKLIPEFDRRQSIRDMFFKKGTSSGHTPGHQPSAPSSVTDDSTIQIADGGMESKLESVI
QPSSAEVITTTPPKSKEPVDLQSSRQQKRSPDPSDHTPRQLKRSKSGTDSAGPKQKIIQG
QTTLKGFFKPMSSATNSAAVTGGQQAQSSTTDRPTTTSTSPPRDAVAGLYTAEIGTLAHE
QSDRANDAVEVPKSPEKVFDPIENKESWSKLLGKRVVPRCEHNEPCISLVTKKPGVNRGT
YFQNSAVSLQLSPGTFPSRAAILIECHLSDGRFIFVPDPSVPRERKRRLLNGDVELSSGV
VIGMAHLRRS
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgggattccgcatcactacgtggaatgtgaacggcatcagaaatccgttcggatatcaa
ccatggagagagcagcgcacctttcaggccatgttcgagatattagaatcagatattgtg
atcatgcaagagacaaagattcagcgaaaagacttacaagatgacatggttttagtccca
ggctgggacgtcttcttcagcttgccaaagcataagaaaggatattctggcgtcgccatt
tatacacgaaatgccacttgcgcccctattagagctgaggagggaattacaggtgtactt
tgtccccctcgatcaatgaccaaattccgagatctaccttcggaccaacaaattggtggc
tacccacgtcccggtcagctttcaggcattgtcgaagacacagtacttgattctgaaggc
cgatgtgttattttagagtttccagcatttgtgctgcttggtgtttacagccctgcgaat
cgagatgaaagtcgggatgagtttcgtaccagctttttcgaggccctggatgtcagaata
cgaaatctcgtggccgaagggaagcaggtcattcttactggcgatttgaacgtgatccgc
tcagaaatggactcaacaaatgtccttgagacgctgcgcaaagaaaatatgactcttgag
gagtggctttctcttccgacacgccgaattttcaatcagctcatcttcgaaggcaacatt
gttggagattatgatgaaggtagagaaagtgcagtattgtgggatttgtgccgttgtttt
catccagatcgactaggcatgaacacttgttgggacaccaaaagaaacacccgaccagcc
aacaatggcagccgaatagactatatattgtgcagtcagggcatcaaagactggtttaca
tttgccagcatccaggaaggtctgatgggttcagaccactgtccagtgtttgctaccatc
gctgacacagtctccttcaaagacaaccaggtctgcctcagcgatgttatgaacccgatc
gggatgttcaagaatggcaagaggatgcgagatctggtgcaaaaggacattttgccactg
tcagcaaaactcattcccgagttcgaccgacgccagagcatcagggacatgttcttcaaa
aagggtaccagcagcggccatactcccgggcaccagccctctgcgccttcaagcgtaaca
gacgattctaccatccaaattgccgacggtggtatggagagtaaactagaaagtgtcatt
caaccaagcagtgccgaggtgatcaccaccactccaccaaaatccaaagagcccgtggat
ctacaatctagccggcaacaaaagcgatctcccgacccatccgatcacacgccaaggcaa
ctgaagcgaagcaaatcgggaacagattcagctggacccaagcaaaagatcatacagggg
caaactacattaaaagggttcttcaagccgatgagctcggcgacaaactccgcagcggta
accggtggtcagcaagcacagagcagcacaacggatcgtccaactaccacgtcgacatca
ccgcccagagacgccgtcgccgggctctacacagcggagatcggaacattagcacatgag
caatctgaccgtgctaatgatgcagtcgaagttccaaagtcacccgagaaagttttcgac
cctatagaaaacaaggagtcttggtccaaattacttggaaaacgagttgtcccccgatgt
gaacacaatgaaccatgcatcagcctcgtcaccaagaagccgggtgtgaatcgtggtacg
tattttcagaactctgcagtatccctccaactctcgccaggcacctttccatctcgtgcg
gccatcctcatcgagtgccatctctcagacggtcgttttatatttgtccccgacccctcg
gtccctcgggagagaaagagaaggcttctgaatggcgatgtggaactttcatctggagta
gtgattggaatggcacatcttcgacgtagctaa
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