Pochonia chlamydosporia: VFPPC_04805 Help Entry VFPPC_04805       CDS       T09407                                  Name (RefSeq) tRNA-splicing endonuclease   KO K10706   ATP-dependent RNA/DNA helicase, senataxin [EC:5.6.2.5 5.6.2.3] Organism pchm  Pochonia chlamydosporia Brite KEGG Orthology (KO) [BR:pchm00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:pchm03021]     VFPPC_04805 Enzymes [BR:pchm01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.3  DNA 5'-3' helicase      VFPPC_04805     5.6.2.5  RNA 5'-3' helicase      VFPPC_04805 Transcription machinery [BR:pchm03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Transcription termination factor      VFPPC_04805 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  SEN1_N AAA_11 AAA_12 SEN1_barrel AAA_30 AAA_19 UvrD-helicase Viral_helicase1 AAA_22 NPHP3_N PP_kinase_N AAA Motif Other DBs NCBI-GeneID:  28848084 NCBI-ProteinID:  XP_022284489 UniProt:  A0A179FU16 LinkDB All DBs Position 3:complement(3192933..3199305) Genome browser AA seq 2062 aa AA seqDB search MSELNEELAKWYEEFQKLPPDCHLLCPKVDSNDHEDYKRLDDDPDSTITIEEKKQRIENG NCRIEITYWNSLIFGFDKSDAGKWLEEFKDRLEDGLKNCSECVLNWHMERQVYLQKFSEK WNEQVIEHIEQMLDRIDVARITCNLTWAKEYIGKIEDSGAVFKKTQFGQHLSVVLIAVYE ALCCMPYMRNPDQRTLFQYVFMRLQGKNYLKLGTKNPLPGMTFFLFDQKNDDRRRWAQEN WKFIDSKSMTEAQFDWAVSDGLTNAIDDIARIQVTPSLSSEERLVIERFWEGFEIILTKL PENLSHSRLRSLELRQGSSIYDLLFRHIQSCFSEGILVVAIRVLTIFLKDYSKALWDVVG DARPNVIADLIFASPVYHTLLRQSLDDCWSGFSMDSDVVPFPTSWIQPWLMSLNRDRRYD ACEVIMHTLFETLAKDPSIGEPGQSACIRAGFDAMNFTMKTFLDPNTQIASGTTHLYAGG AFNLIVKYKDVILGNLRPPRESREGWTTFKVSDAAMSVIQAAMRLDMKMFSEEFQAIHNN KQLQSAIIRKSQVFWEGIVELFDSSGDQVTLAKDVLVSLASLISVEQIRPRKTVNKLNES SERFNASLNTIADVLARILGRISEVDATDLNLLFADRLPFQVIVGLSVHDNSDLAEGSAE ILKSWTGELSRSGALEHMSQLHPEQTLSSIVWTLEKILRPPFPWGPIRPLLNMSRDVLRG LSDPTSGVLRTKTLNSKSAAVVLRWWNEQWRFVSKSCLNIESWSFCIPNAIMTEFCREIM ELAEALIAEDGLLTSATALGKSEQDVMPIILGPAKDNFRGMENMIRLKDRWLVDVTVRVL CKILTRLRENKLEINEASRKLITDACIPTGTTGKYLRSTNLNDQQRAELLQALGHDEEVQ TIQVRPATSIADRTTTLNKEKLKKQSKLDAWSMSAPPGTSPSDSSKPRRTNRDDVLDLSR SADSPILKHLAAQQARAKAKGPDMKAISALKESRQREKAEKAKRDAEAIARAKKIRGETI PSEGSGIHSMGLAGRSEIMVNSSDEESDDDSADSDSDGQLASLSTGGQKGLDEHEKRRQQ ALRDRLRRPVKKIRQQRSVKEMRARLIPPMDRLHNTILAWDIFHQGNDPPNGPTASEVAT KYPDPRSYQGTFFPLLASEAWRSFVTAKDEITAQPFGMKLASRASVDSYLEVAFTLPVVQ NRDRGVSEGDILLVSEAQDPLSTPASRHCLARVHRITYKKDLIEITYRVASRNNPLSTLL MPGSTVHGVKITNMTTIEREYAALESLQYYDLMDEILKAEPSPILRYGDEKISNAMQNWT LNHGQAVAVLGAQDNDGFTLIQGPPGTGKTKTITAMVGSLLSEQLAQVSNGVPVGAPLRP LASSVPITQGRSKKLLVCAPSNAAVDELVLRLKNGVKTATGKTKPINVLRLGRSDAINAA VKDVTLDELVRVRMEGDNTKDKAKAERDKLHEDAAKIKEELTEIRQLLDEARAQDNRITQ NTLSRKFDELKRQQMNIGKQIDANKDSGNSLAREMEMRRRQVQQEILNSAHVLCATLSGS GHEMFRNLDVEFETVIIDEAAQCVELSALIPLKYGCCKCILVGDPKQLPPTVLSQSAARF GYDQSLFVRMQQNHPKSVHLLDMQYRMHPEISRFPSKEFYEGQLQDGQDMMQLRQQPWHQ STLLGPYRFFDVEGVQSKGRKGQSLVNTRELDVAMEIYDRFRREYKQCDLTGKIGIITPY KAQLFELRNRFTSRYGDNITDIIEFNTTDAFQGRECEIIIFSCVRASSTGGIGFMTDIRR MNVGLTRAKSSLWILGDSRALVQGEFWKKLIEDAKSRDRYTKGDILRMFRQPLEKANPST YATPRVDFPQDIEMSDVPPANAAMSDMDTTLGSFTPNRNATASPALSDGARSRQSLDLGP PNVVPRGAGPPVIHTSESQAAETKKRALDGPESAQQAAKRIASTQRGGLMGKFGQKPIKQ TRPPVPKDPSAMSVLGMVPPERPPAQPSTNSMVTAMNQAPSGSMSTAGQSSNSMASSKAM NKPIPTGPRKKAKPSLFMPKKR NT seq 6189 nt NT seq  +upstreamnt  +downstreamnt atgtcggaacttaatgaggagctggcaaaatggtatgaggaatttcaaaagctgccgcct gattgtcacctactgtgtccgaaagtcgactccaatgatcacgaggattacaaaaggctc gacgacgacccggactcgacaattactatagaggaaaagaagcaacgtatcgagaacggt aattgccgcatcgagatcacctattggaacagcctaatttttggctttgataaaagtgat gccggaaaatggctcgaagagtttaaggacagacttgaagatggccttaaaaactgctcc gaatgtgttctcaattggcacatggaacggcaggtctatctccaaaaattttccgaaaag tggaacgaacaggttatcgaacacatcgaacaaatgctggatcgaatcgacgtcgcaaga attacatgcaacctcacctgggccaaggaatacattggcaagattgaagacagtggcgca gtcttcaaaaagacccaatttgggcaacatttgtcggtagttctcattgctgtttacgaa gcactctgctgcatgccatatatgaggaatcccgatcaacgcacactctttcagtacgtg tttatgcgactacagggcaaaaactacctcaagctggggactaaaaatccgcttcctggc atgactttcttcttgtttgaccaaaaaaatgatgatcgacggcgatgggcacaagagaat tggaaattcatcgactcaaagtcaatgacggaggcccaatttgattgggcggtaagcgat ggattgaccaacgccatagatgatatcgctaggatccaggttacaccctccctgtcgagt gaagagcgattggtgattgagcgtttctgggaaggatttgagattattttgactaagctg ccagagaacttgagccacagccgtttgcgcagtctggagttgcgccaaggctccagtatt tacgacttgctgttccgtcacatccagagctgtttctccgaagggatactggttgttgcg attcgcgtactgaccattttcttgaaggattactccaaagccttatgggacgtggtcggt gatgcccggcccaacgtaattgctgatctaatctttgcgagccccgtgtaccatactctg ctccgtcaatctctggatgattgttggagtgggttcagcatggattcggatgttgtgccc tttccgacatcttggattcagccctggctgatgtccttgaatcgggatcgtaggtatgac gcctgtgaggttattatgcatacgttgtttgagacgttggcaaaggacccatctattggg gaacctgggcaatccgcgtgtattcgcgctgggtttgatgccatgaacttcaccatgaaa accttcttggatccgaatactcagattgcatccggcacgactcatctatacgcgggcggc gcctttaacctcatcgtaaagtacaaagatgtcatattgggaaatctgcggccaccgcgt gaatctcgcgaaggttggacaacattcaaagtctctgacgccgccatgtccgttatacag gctgccatgagattagacatgaaaatgttttcagaggagttccaagccattcacaacaac aagcaacttcaatcggcaataattcggaaatcacaagtgttttgggaaggcattgtagaa ttatttgattcctcaggggatcaagtgacattggcgaaggacgtcctggtgtcccttgct tctctgatttcggtggaacagattcggccgcgcaagaccgtcaacaaactgaatgagtcc agtgaacgattcaacgcatccctcaacaccatcgctgatgtgttggcaaggattttgggt cgaatctctgaggtggatgcgactgacctgaatctcctatttgcagaccgtttaccattc caagttatcgtcggactgtctgttcacgacaattctgacctggctgaaggatcagccgag attctcaaaagctggacaggtgaattatcgcgaagcggcgctttagaacacatgtctcaa ctacacccggagcaaaccctctcttccatcgtttggacgctggagaaaatattgcggccg ccgtttccttgggggcctatccgaccattactcaatatgagcagggatgttctcagagga ctctccgacccaacatcgggagttctcagaactaagacgctaaactcaaagtccgctgct gtagtgctgcgttggtggaatgagcagtggcgattcgtttcgaagtcttgtctcaacata gaatcctggtcattttgtattccaaatgccatcatgactgagttctgccgagaaatcatg gagctggcggaggctcttattgcagaagatggcctgctcacctcggccaccgctttgggc aagagcgaacaagatgtgatgccgatcattcttgggccggccaaggacaacttcaggggg atggagaacatgattcggctgaaggatagatggttggttgatgtgacagttcgcgttctc tgcaagatcttgacacggctgagggaaaacaaactggaaattaatgaagcatcccgaaaa ctcatcacagacgcctgcatccctactggaaccaccggaaagtatcttcgctctacaaat ttgaacgaccagcaacgtgccgaattgctccaagctctgggccatgatgaagaggttcag acaattcaagtgagaccagctactagcattgcagatcggacgacaactttgaacaaagaa aagttgaaaaagcagagcaagctagatgcttggtccatgtcagcaccgcctgggacttct ccttcagattcatcgaagccgagaagaacgaatagggacgatgtattggatctcagtagg tctgcagatagtccaattctgaaacacctcgcagcacagcaagcaagggctaaagccaag gggcccgacatgaaggcgatttcggcattaaaggagagcaggcagagagaaaaggcggag aaggccaagagagacgctgaagccattgcgagggcgaagaagattcgcggagaaaccatt ccaagcgaggggtctggaatccacagcatggggctagcaggcagaagtgagatcatggtc aacagctctgatgaggaatcagacgatgatagcgccgactctgattctgatggacagctt gcaagtctgagtacgggtggtcagaaaggtcttgacgagcacgagaaacgtcggcagcag gctttgcgagatcgacttcgtagaccagtcaagaagatacggcaacagcgttcagtaaag gaaatgagagcgcgattgatccctccaatggacagacttcataacactattctggcatgg gatattttccaccaaggcaacgacccacctaatgggccaactgcctccgaggttgcaacc aagtatccggaccccagatcatatcagggaactttctttcctttgctggcttctgaagct tggcggtcatttgtcacggcaaaggatgagataacagctcaacctttcggcatgaagctg gcgagcagagcaagcgtggatagttatctggaagtggcattcacactaccagttgttcaa aatcgtgacagaggcgtatcagagggagatattctgttggtatctgaagcccaagatcca ctcagcaccccggcttcaagacactgtctcgccagagtgcatcgaatcacctacaaaaag gacctcattgaaatcacctatcgagtggcatcgcgaaataaccccctttcgaccttgtta atgcccggctccactgttcacggggtcaagattacaaatatgacaacgatcgaacgagaa tatgcagcactagaaagtctacagtattacgacctcatggatgaaatattgaaagctgaa ccgtcaccgattcttcgatacggtgacgagaagatttcaaatgccatgcaaaactggact cttaatcacggtcaagcggtagcagttcttggggctcaggacaatgacgggttcacgctt attcaaggaccacctggaacaggcaagacgaagacgattaccgcaatggttggttccctt ttgtcagaacagcttgcccaggtgtcgaatggtgtccctgtcggcgctccactgcgacct ttggctagttctgtacccataacccagggtcggtctaagaaacttctagtttgtgctccc agtaacgcggctgttgacgaattagtccttcgtctcaagaacggcgttaagacagctact gggaagacaaagcctatcaatgtgcttcgacttggtagaagtgatgctatcaatgctgcc gtgaaggacgttaccctcgacgagctggtccgggttcggatggaaggcgataataccaag gacaaggccaaggcggagagagacaaactccacgaagatgcggccaagatcaaggaagag cttacggaaatcagacaacttcttgacgaggcacgagctcaggacaaccgcattacacag aataccctgtccagaaaatttgatgaactcaaacggcagcaaatgaatatcggcaaacag atcgatgcaaacaaagatagtggcaattctctggcacgagagatggaaatgcgtcgaaga caagttcagcaggaaattctgaactcagcgcatgtgctttgtgcaacgctcagtggaagt ggccatgaaatgtttcgcaacttggatgttgagtttgaaaccgtcatcattgatgaggct gcccagtgtgttgaactcagcgctctgattccactcaagtacggatgctgtaagtgcatt ctggttggtgatcccaagcagcttcccccgactgtcttgtcccagtctgccgcaaggttt ggctacgatcaaagtttgtttgtgagaatgcagcagaaccatcccaagtcggttcatcta ctcgatatgcagtatcgaatgcatccagaaattagcaggtttccgagcaaagagttttac gaaggtcaactccaagacgggcaggatatgatgcaactgcgacaacaaccctggcaccag agcactctcctcggcccttaccgatttttcgatgtggagggtgtacagtcgaaaggtaga aagggtcagtcattggtcaacaccagagaattggatgtggccatggaaatctacgaccgt ttcaggagagagtacaagcagtgtgatctaaccggcaagattggtatcattacaccttac aaggcccagttgtttgagctacgcaaccgctttaccagccgatatggcgataacattacc gacatcatcgagttcaatacgacggatgctttccaaggtcgcgaatgcgaaattatcatc ttttcttgtgtgcgagcgagctccacgggaggcattggtttcatgacggatattcgtcgt atgaacgttggtttgacacgcgctaaatcctcactatggattttgggagattccagagca ctagttcagggtgagttttggaagaagctgattgaagacgccaaatccagagaccgctac accaagggcgatatactccgaatgtttcggcagcctttggaaaaggcaaacccttcgaca tacgccacccctcgagtggattttccccaggatattgagatgtcagacgtcccgccggca aacgctgcaatgagtgatatggataccacattggggtcattcacgccaaatcgaaacgca acagcctctccagccctcagcgatggagctagatctcggcagagcctagatctcggccca ccgaatgttgttccacgcggagctggtcctcccgttattcatacctccgaatcacaagct gctgaaacaaaaaagcgagcactcgacggaccagagtcggcgcagcaggcggcgaagaga attgccagcacgcaacgaggcggtctgatgggcaagttcggacagaagcccatcaaacag actcgaccgcctgtacccaaagacccttcagcaatgtcggtccttggaatggttccccca gagcggccccccgcgcagccgtcgacgaactcgatggtgacagcgatgaatcaagcaccg agtggatcgatgtcgactgcgggtcaatctagcaactcaatggcttcctcaaaggctatg aacaagcctataccgacggggcctcgaaagaaggcaaaaccaagcctgtttatgcccaaa aagcggtaa

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