Pochonia chlamydosporia: VFPPC_04839
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Entry
VFPPC_04839 CDS
T09407
Name
(RefSeq) elongation factor 1-alpha
KO
K03231
elongation factor 1-alpha
Organism
pchm
Pochonia chlamydosporia
Pathway
pchm03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pchm00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
VFPPC_04839
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pchm03019
]
VFPPC_04839
03016 Transfer RNA biogenesis [BR:
pchm03016
]
VFPPC_04839
03012 Translation factors [BR:
pchm03012
]
VFPPC_04839
04131 Membrane trafficking [BR:
pchm04131
]
VFPPC_04839
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pchm04147
]
VFPPC_04839
Messenger RNA biogenesis [BR:
pchm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
VFPPC_04839
Transfer RNA biogenesis [BR:
pchm03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
VFPPC_04839
Translation factors [BR:
pchm03012
]
Eukaryotic type
Elongation factors
VFPPC_04839
Membrane trafficking [BR:
pchm04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
VFPPC_04839
Exosome [BR:
pchm04147
]
Exosomal proteins
Proteins found in most exosomes
VFPPC_04839
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
GTP_EFTU_D4
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
28848114
NCBI-ProteinID:
XP_018145471
UniProt:
A0A179FU22
LinkDB
All DBs
Position
3:3315723..3317909
Genome browser
AA seq
535 aa
AA seq
DB search
MSPLSLCWLPRAAASISHSTPPPLTFLNLLLPPPLCEFFSLLAPRLAYPVQASDLRIYTF
RQDTILQNFTTFTPSKWVRTTRLTSTWSLSHVDSGKSTTTGHLIYQCGGIDKRTIEKFEK
EAAELGKGSFKYAWVLDKLKAERERGITIDIALWKFETPKYYVTVIDAPGHRDFIKNMIT
GTSQADCAILIIAAGTGEFEAGISKDGQTREHALLAYTLGVKQLIVAINKMDTAKWAEAR
YQEIIKETSNFIKKVGYNPKTVAFVPISGFNGDNMLTASTNCPWYKGWEKETKAGKSTGK
TLLEAIDAIEPPKRPTDKPLRLPLQDVYKIGGIGTVPVGRIETGVLKPGMVVTFAPSNVT
TEVKSVEMHHEQLSEGVPGDNVGFNVKNVSVKEIRRGNVAGDSKNDPPMGAASFDAQVIV
LNHPGQVGAGYAPVLDCHTAHIACKFSEIKEKIDRRTGKAVESAPKFIKSGDSAIVKMVP
SKPMCVEAFTDYPPLGRFAVRDMRQTVAVGVIKSVEKAAAGSGKVTKSAAKAGKK
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgtcccctctctctctgtgctggttgccccgcgccgcagccagcatcagtcactccacc
cctcctccactcacctttttaaatctcctcctcccaccaccgctttgcgaatttttctct
cttcttgctcctcgtctcgcatacccggttcaagcatccgatctgcgaatttacactttc
cgtcaggacaccatactacaaaacttcacaacctttacaccgtcaaaatgggtaaggacg
acaagactcacatcaacgtggtcgttatcccacgtcgactccggcaagtctaccaccact
ggtcacttgatctaccagtgcggtggtattgacaagcgaaccatcgagaagttcgagaag
gaagccgccgaactcggtaagggttccttcaagtacgcatgggttcttgacaagctcaag
gccgagcgtgagcgtggtatcaccatcgacattgccctctggaagttcgagactcccaag
tactatgtcaccgtcattgacgctcccggccaccgtgatttcatcaagaacatgatcact
ggtacttcccaggctgactgcgctattctcatcatcgctgccggtactggtgagttcgag
gctggtatctccaaggatggccagacccgtgagcacgctctgctcgcctacaccctgggt
gtcaagcagctcatcgtcgccatcaacaagatggacactgccaagtgggccgaggctcgt
taccaggaaatcatcaaggagacttccaacttcatcaagaaggtcggctacaaccccaag
accgttgccttcgtccccatctctggtttcaacggcgacaacatgcttactgcctccacc
aactgcccctggtacaagggctgggagaaggagaccaaggctggcaagtccaccggaaag
acccttctcgaggccattgacgccattgagcctcccaagcgtcccaccgacaagcccctc
cgtcttcccctccaggatgtctacaagatcggtggtattggaactgttcccgtcggccgt
atcgagactggtgtcctcaagcccggtatggtcgttaccttcgctccctccaacgtcacc
actgaagtcaagtccgtcgagatgcaccacgagcagctctccgagggtgtccccggtgac
aacgtcggcttcaacgtgaagaacgtttccgtcaaggaaatccgccgtggtaacgttgct
ggtgactccaagaacgacccccccatgggtgccgcttctttcgatgcccaggtcatcgtt
ctcaaccaccctggtcaggtcggtgctggttacgctcccgtcctcgattgccacaccgcc
cacattgcctgcaagttctctgagattaaggagaagattgaccgacgtaccggtaaggct
gtcgagtctgcccccaagttcatcaagtctggagactccgccatcgtcaagatggttccc
tccaagcctatgtgcgttgaggctttcaccgactaccctcccctgggtcgtttcgccgtc
cgtgacatgcgtcagaccgtcgctgtcggtgtcatcaagtccgttgagaaggccgctgct
ggttccggcaaggtcaccaagtccgctgccaaggctggcaagaaataa
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integrated database retrieval system
