Pochonia chlamydosporia: VFPPC_05568
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Entry
VFPPC_05568 CDS
T09407
Name
(RefSeq) helicase SWR1
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
pchm
Pochonia chlamydosporia
Brite
KEGG Orthology (KO) [BR:
pchm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pchm03036
]
VFPPC_05568
Chromosome and associated proteins [BR:
pchm03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
VFPPC_05568
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ERCC3_RAD25_C
UBA
HDA2-3
UBA_7
HTH_49
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
28848736
NCBI-ProteinID:
XP_018141584
UniProt:
A0A179FG60
LinkDB
All DBs
Position
5:904942..908076
Genome browser
AA seq
1025 aa
AA seq
DB search
MANSSSPLLPLRHITGAPRTPTISRTSNPIDEVDELAGDTIPCSPSAFLRDSSREREITQ
PTQILSRPGLGLAMERSSSPASIIEVPASSPFQPKEKPKFGSRLAPAGTFFRPPPRPPPR
PAVPKRPAAEPISLISDDEGDSSPPRGDIRPTAFKAQIAGFAYNPAAEERTTKMKLRQIY
DVFGDRFPSEVVREALKACKNDVEDAIIWLESQPTQKEKPSAQGLNKANGRRLVSKASMQ
NYAKDRASGHRDESVSLESSPVKQVKPQKRRLVQGLKRRNDSSPQKSFDLPPPPSSDGPL
VIDLIDNDKEDAYEAEPSPAPSEEDDDRVLNCLNTSTLKELAAMTGLKEALLEALVEKRP
FTDLSQARRVSATKKPGARKSPRVSIGETAVDAVEVFLNAVTAIDEVVAKCETKGQTVKS
VMETWDLDTFGHNKRSSRVSPDVDLPPTPTSMNSKYTRPLVPRQPALMDGHCEMKPFQLF
GLNWMSLLYNYDIGCILADEMGLGKTCQVISFMCHLVEEYERGSQRSRPWPNLIVVPPST
YNNWLHEFERFAPDLTVVGYRGSQSERAAIAYEVEQEPESFHVVLATYSQINSEADIEAM
QSFDLNAAVFDEGHKMKNPETKIYRDLRRITAKWKMLLTGTPVQNNLLEMTALLNFINPK
MFDGYMDDIQYIFSQKVTIRDVSNGAFLYAERVKRARTILEPFILQRRKDQVLSDMPQKI
CTVAHCDMTESQKDTYAEYEELFKLEPSLRASKAKGRQNDQNNVWMQLRKAALHPLLFRR
HFTDEKVEEMGKILMDRIPQSELHQPDIKHLIQELKNSSDFELHLWCRDYPRLLRQFDIP
ASAELDSGKVKKLLELIRQYQENGDRVLVFSKFSRLIELLQEVLALQDIDHRVLMGTTNV
SERQTLIDEFNDNPEIPVFLLTTGAGGTGINLTAANKVIIFDQSDNPQDDIQAENRAHRL
GQKRDVEVVRLIASHTIEELIYKACQKKIELANKVTGALEDDQDAEQNMEQEVRKMMMEE
KMTPP
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atggccaattcctcgtccccgttgctgccattgcggcatatcaccggcgcacctcgaaca
ccaacaatctcgagaacctcgaatccaatagacgaagtcgacgagctggccggggacaca
attccctgctcgccgtctgcattcttgcgagactcgtcccgagagagggagatcacacaa
ccgacacagattttgagcagaccaggactgggattagccatggaacgttcatcttcacct
gctagcatcattgaagttcctgcgtcttcaccctttcagcccaaggaaaagccaaagttt
ggctctcgtctcgcgcctgccgggactttctttcgtccgccacctcgaccaccacctcgt
ccggccgttcccaaacgacccgccgcagagccgattagtctaatctctgacgatgagggc
gattcttcgccgccgaggggggatattcgtcctacagcgtttaaagcacagattgccggg
tttgcatacaaccccgccgctgaagagaggacgaccaaaatgaagctgcgacagatatat
gatgtttttggcgacaggttcccctcggaagtagttagagaagcactcaaagcatgtaaa
aatgacgtcgaagatgcgattatttggcttgagtcgcagcctacacagaaggagaagccc
agtgctcagggactcaacaaggcgaacgggcgccggctggtatcaaaggcatcgatgcag
aactacgcgaaggaccgagcgtcgggtcatcgagacgagtctgtttcactcgaatccagc
ccagttaagcaggtgaagccacagaagcggcggctcgtccaaggattgaaacggcggaat
gattcgtcaccgcagaaatcgttcgatctgcctccaccaccctcaagtgatggtccattg
gttattgacttgatcgacaatgataaggaggacgcatatgaagcagagccgtctccagcc
ccttcagaagaggacgacgacagagtgcttaactgcctcaacaccagtactctcaaggag
cttgcggcaatgacgggcttgaaagaggcgcttcttgaagccctggtcgagaagagaccg
ttcaccgatctgtcgcaagcccggcgagtcagcgcaacgaagaagccgggtgcccgaaag
tcaccaagagtcagcataggcgaaaccgctgttgacgccgtggaagtgtttctcaacgct
gtgaccgctattgacgaagttgtggcaaaatgtgagacaaaggggcaaacagtcaaaagt
gtcatggaaacctgggatctcgacactttcggccacaacaagcggagtagtcgagtatct
cccgacgtcgatttgccgcctacgccgacaagcatgaattccaagtacacacgaccactg
gtaccacgacagccggcgcttatggatgggcattgcgaaatgaagcctttccaactattc
gggttgaactggatgtccttattgtacaactacgacataggatgtattcttgcagacgag
atgggcctgggcaagacatgccaggtaatttcgttcatgtgtcatttggttgaagaatat
gaacgagggtctcaaaggagtcgaccctggccaaacttgattgtggtgccaccaagcact
tacaacaattggcttcacgaatttgagagatttgctccagacctgactgttgtggggtat
cgaggatctcagtcagaaagggccgcgattgcgtatgaggttgagcaagaaccagagtca
tttcacgtcgtcttggcgacatattcgcaaatcaactcggaggcggatattgaggcaatg
cagtcatttgatctcaacgcagccgtttttgatgaaggacacaaaatgaagaatccggag
acaaagatttacagagacttgcgccgcattactgcaaagtggaagatgctccttactggt
actccggttcaaaataaccttctcgaaatgacagctctactcaacttcatcaaccccaag
atgtttgatggatacatggacgacattcaatacattttcagccaaaaggttactattcga
gatgtgtcgaacggggctttcttgtatgccgaacgtgtgaagcgtgcacgaaccatcttg
gagccgtttattctccagcgtcgcaaggaccaggttttgtcagacatgccgcaaaagatt
tgcactgttgcccactgtgatatgacagaatcgcaaaaggacacatacgccgaatacgaa
gaacttttcaaactggagccgtcgttgcgagcatcgaaggccaagggacgacaaaatgat
caaaataatgtctggatgcagctccgcaaagcagcgctgcatccgctgctgttccgacgg
cactttacggacgaaaaggtggaagaaatgggcaagatattgatggataggataccacag
tctgagcttcatcagcccgatatcaagcatctgattcaagagctcaagaattcgtccgat
ttcgaactacacttgtggtgtcgagattatcctaggttactgagacaatttgatatccca
gcctcggcagaattggacagcggcaaagtgaagaagctgttggagctgatacggcagtat
caagagaacggagatcgagtgcttgtattcagcaagttttcccgattgatcgagcttctg
caagaggttctggctttgcaggacattgatcatcgagtgctcatgggcaccaccaatgtt
tccgagcgacaaacactcattgacgagttcaatgacaacccagaaatcccggtgttctta
ttgacaaccggcgctggcggaacaggcatcaaccttaccgcagcaaacaaggtcatcatc
tttgaccaatcggataacccacaggacgatattcaggcagaaaaccgtgctcatcgtcta
ggacagaagcgagatgtcgaggtagttcggctcattgcttcgcacaccattgaggagctt
atttacaaggcgtgtcagaagaagattgagctcgccaacaaagtgactggtgccctggag
gacgaccaggatgccgagcagaacatggagcaggaagtacgcaagatgatgatggaggag
aagatgacgcctccttag
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