Pochonia chlamydosporia: VFPPC_05689
Help
Entry
VFPPC_05689 CDS
T09407
Name
(RefSeq) DNA polymerase III, delta subunit domain-containing protein
KO
K10755
replication factor C subunit 2/4
Organism
pchm
Pochonia chlamydosporia
Pathway
pchm03030
DNA replication
pchm03410
Base excision repair
pchm03420
Nucleotide excision repair
pchm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pchm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VFPPC_05689
03410 Base excision repair
VFPPC_05689
03420 Nucleotide excision repair
VFPPC_05689
03430 Mismatch repair
VFPPC_05689
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pchm03032
]
VFPPC_05689
03036 Chromosome and associated proteins [BR:
pchm03036
]
VFPPC_05689
03400 DNA repair and recombination proteins [BR:
pchm03400
]
VFPPC_05689
DNA replication proteins [BR:
pchm03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
VFPPC_05689
DNA Replication Termination Factors
ELG1-RFC complex
VFPPC_05689
Chromosome and associated proteins [BR:
pchm03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
VFPPC_05689
DNA repair and recombination proteins [BR:
pchm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
VFPPC_05689
Check point factors
HRAD17(Rad24)-RFC complex
VFPPC_05689
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_14
nSTAND3
AAA_16
AAA_22
RuvB_N
Viral_helicase1
RCF1-5-like_lid
AAA_3
DNAX_ATPase_lid
Rad17
Mg_chelatase
MeaB
AAA_assoc_2
DNA_pol3_gamma3
NTPase_1
AAA_11
AAA_19
KTI12
Gp44_lid
ATPase_2
AAA_24
NB-ARC
AAA_28
AAA_18
Motif
Other DBs
NCBI-GeneID:
28848834
NCBI-ProteinID:
XP_018141730
UniProt:
A0A179FFV5
LinkDB
All DBs
Position
5:complement(1307866..1309049)
Genome browser
AA seq
357 aa
AA seq
DB search
MPAAKTEERGESSTAASKAAMTSSSNGSPNYELPWVEKYRPVFLDDVVGNTETIERLKII
AKEGNMPHVIISGMPGIGKTTSVLCLARQLLGESYKEAVLELNASDERGIDVVRNRIKGF
AQKKVTLPPGRHKLVILDEADSMTSGAQQALRRTMEIYSNTTRFAFACNQSNKIIEPLQS
RCAILRYAKLSDAQVVKRLLQIIEAEKVEYSDDGLAALVFSAEGDMRQAINNLQSTFAGF
GFVSGDNVFKVVDSPHPIKVQAMLKACYEGNVDSALDTLRELWDLGYSSHDIISTMFKVT
KTIPTLSEHSKLEFIKEIGFTHMKVLEGVQTLLQLSGCVVRLCKINMDPKKFQVAAK
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgcctgccgccaaaaccgaggaaagaggcgagtcttcgaccgctgcgtcgaaggcagct
atgacctcatcgtcaaatggctctccgaattatgaattgccatgggtcgaaaagtaccgt
cccgtgttcttggatgatgtggtcggcaacacagagacgattgagcgattgaagattata
gcaaaggaaggaaacatgccccatgtcattatttcaggaatgccaggcattggaaagaca
acgagcgtgctgtgtctggctaggcagctcctgggggagtcgtataaggaggctgttctc
gagctgaatgcaagtgacgagagaggcattgatgtcgtccgtaatcgaatcaagggcttc
gctcaaaagaaggtcacattaccacctggcaggcacaagctcgtcattctcgacgaagcc
gacagcatgacatctggtgcccagcaagcgcttcgccgaaccatggaaatctactccaac
acaacccgatttgcctttgcatgcaatcagtccaacaagatcattgagccgctgcaatca
cgatgcgccattctccgatacgccaagctctccgacgcccaggttgtcaagcgattacta
caaatcatcgaggctgaaaaggtcgaatacagcgatgacggcctagccgctcttgttttc
agcgcggaaggagacatgcgacaggctatcaataacttgcaatccacttttgctggtttc
ggcttcgtttctggggacaatgtgttcaaagtcgtcgactcgcctcatcctattaaggtg
caggctatgctgaaggcgtgctacgagggcaatgtggactccgcgctagatactctgagg
gagctttgggatctaggatattccagccacgatatcatcagcactatgttcaaggtgacc
aagacgattcctacactgagcgagcattccaagctggagtttatcaaggagattggcttc
acgcacatgaaggtcctggaaggtgttcaaacgctactacaattaagcggctgtgttgta
cgactgtgcaagatcaacatggacccgaaaaagtttcaagtagcggcaaaataa
DBGET
integrated database retrieval system
