Pochonia chlamydosporia: VFPPC_05765
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Entry
VFPPC_05765 CDS
T09407
Name
(RefSeq) cap binding protein
KO
K12882
nuclear cap-binding protein subunit 1
Organism
pchm
Pochonia chlamydosporia
Pathway
pchm03013
Nucleocytoplasmic transport
pchm03015
mRNA surveillance pathway
pchm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pchm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
VFPPC_05765
09122 Translation
03013 Nucleocytoplasmic transport
VFPPC_05765
03015 mRNA surveillance pathway
VFPPC_05765
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pchm03019
]
VFPPC_05765
03041 Spliceosome [BR:
pchm03041
]
VFPPC_05765
Messenger RNA biogenesis [BR:
pchm03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
VFPPC_05765
Spliceosome [BR:
pchm03041
]
Common components
Common spliceosomal components
Cap binding complex
VFPPC_05765
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like
MIF4G_like_2
MIF4G
Motif
Other DBs
NCBI-GeneID:
28848900
NCBI-ProteinID:
XP_018141815
UniProt:
A0A179FGW8
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All DBs
Position
5:complement(<1528080..>1530711)
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AA seq
805 aa
AA seq
DB search
MADYDRRHSGGHHNRKRRYRDDDEHYDRRQQRRRTDSAPVPVRLRRQLLSLADSPLRRWS
EEVTSIARMVTENYEDENLRNTFVNLVLQLAVEQPLKTPFVGAVVVVANALKAELLGVVV
ARLATELEQNIAQGNWREVKLLLKLLACLQGCLEGNGIFPLLEELFMRAADLQTASSDDV
IGTEIVKIILLTIPYAMAAVPGQFTQQAAELMEKTDIIASEPHALQALVDPFHPEGEDES
PAAAMSLCMLLQKQLQAEAGRDWALPSIPRPWQMPLEEVETQDKLANATKHALPTISVPS
TAIAGPRLLFPEVYYSVYGDQEVESVPPPDNIAASLIRDALADTINILDFNRNATARFLM
DLDCYFADGTFVKRATPFDELRNQPDGRSTWKPEDVAVDAVFSQLFQLPKPEHKVVYYHA
VLTEACKLAPAAIAPSLGRAIRFLYRNTPRTDLELSYRFINWFSHHLSNFGFTWKWTEWS
EDTDLPDLHPCKWFLLGALDKEIRLSFAQRIQKTLPEPYQPLIGPDKEKDVPDFKFSNPD
TPFSKEGQEIGALLRRKAPDEDFQPTIDSIQAQAAEHALDPIIASTDVFMTAVCWVGSKS
LSHVLACIDRTKGRLIDVGTAHPAARSQIISSVMNYWAAHPGVAITIIEKLLNYSILTPF
SIVDWTLVASTPSNGTQGGEALGHSHIFELVSNTVAKVSGRVRQLLTSPEADDETRQKEV
SSMRDLFRAINDALASWAAGSKDQLMEDGDGSSAREAMIRRWGQRWLRVFNRLAAIEETF
VTEAKNGRWNQKETTDGVQPSDVQA
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atggcggactacgatagacgccactccggtggccatcacaaccgcaagaggcgatacaga
gatgatgatgaacactacgatcgccgccaacagcgcagacgaacagattcagcacctgta
ccggttcgacttcgccgccagctactaagtcttgctgattcgccattacgacgatggtcc
gaagaagtcacatctattgcgcgaatggtcacggaaaattacgaagacgagaacctgcgc
aacacttttgtcaatttggtcctgcagctggctgtggagcaaccactcaagacgccattt
gttggtgctgtcgtggtggttgctaacgcactcaaggcagagctgttgggcgtggtggtt
gctcgtctggcaacggagctggagcagaatattgcgcaaggcaattggagagaggtgaag
ctgcttttgaaactgttggcatgcttgcaggggtgtttggaagggaatggcatctttccg
ttattggaggagctgttcatgagggctgccgacttgcagacggctagctctgacgacgtt
atcgggactgagattgtcaagatcattcttcttactattccgtatgcgatggcggctgtg
ccaggacaatttacccaacaagcggccgagcttatggaaaagacggacattattgcatcg
gaacctcatgcacttcaagcccttgtcgatcctttccaccccgaaggagaagatgaaagt
cccgctgcggcaatgagcctgtgcatgctccttcagaagcaattgcaggcagaggctgga
agggattgggcgcttccctccatccctcgaccttggcagatgccgttggaagaggtggag
actcaggacaagcttgcaaatgccacgaagcatgcactccctacaatctctgtcccgtcg
acagctattgccggaccacgtctgctcttccctgaggtgtactactcagtgtacggtgac
caagaggttgagtcggtaccgcctccggacaacatcgccgcatcactgatacgcgatgcg
ctggctgataccatcaatattctcgactttaacagaaatgccacggctcgattcttgatg
gaccttgactgctatttcgcggatgggacgtttgtcaaacgggccaccccatttgatgag
ctgcggaaccaacctgatggccggtcgacgtggaagcccgaagatgttgccgtagatgcc
gttttctcacagctctttcagctccccaaacccgaacacaaagttgtctactaccatgcc
gtcctgactgaagcttgcaagcttgcccccgcggcaatcgcccccagcctcggccgagct
attagattcttgtaccggaacacacccagaacggacttggagcttagctaccgctttatc
aactggttctcacaccacttgagtaactttggctttacatggaaatggacagaatggtcc
gaggatactgatctgccggacctgcacccctgcaaatggttcctcctcggagccttggac
aaggagattcgtctcagttttgcacagagaattcaaaagacgcttcctgagccataccaa
ccactcattgggcccgataaagaaaaagatgttcctgactttaaattcagtaaccctgac
acccccttctccaaggaaggccaagaaataggagcgcttctccgtcgcaaagcaccagac
gaagacttccaaccaacaatcgacagcatccaagcacaagcagctgaacacgctctcgac
cccatcatcgccagcacagacgtcttcatgacagccgtatgctgggtcggttccaaatcc
ctcagccacgtcctcgcgtgcatcgaccgcacaaagggccgcctcatagacgtcggaacg
gctcatcctgccgcacgctcccaaatcatctcctctgtcatgaactactgggccgctcac
ccgggcgtagcaatcaccattatcgaaaaactcctcaattactctatcctcacacccttt
tccatcgtggactggaccctcgtcgctagtaccccttcaaatgggacgcagggcggcgag
gcacttggccattcacacattttcgaacttgtctccaacacggtagccaaggtgagcggg
cgtgttcgccaacttctcacgtcacccgaggcggatgacgaaacgcgccaaaaggaggtt
tcttccatgagggacttgttccgcgctattaacgatgcgttggcaagttgggcggctgga
agtaaggatcagttgatggaggatggggacggctcctcagcgagagaggccatgattcgg
agatggggacagcgctggctacgcgttttcaataggctggccgccattgaagagacgttt
gtgacggaggccaagaacgggaggtggaatcaaaaggaaactacggacggggtacagccc
tcagatgtccaggcgtaa
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