Pochonia chlamydosporia: VFPPC_05830
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Entry
VFPPC_05830 CDS
T09407
Name
(RefSeq) lipid A export ATP-binding/permease protein msbA
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
pchm
Pochonia chlamydosporia
Pathway
pchm02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pchm00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VFPPC_05830
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pchm02000
]
VFPPC_05830
04147 Exosome [BR:
pchm04147
]
VFPPC_05830
04090 CD molecules [BR:
pchm04090
]
VFPPC_05830
Enzymes [BR:
pchm01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
VFPPC_05830
Transporters [BR:
pchm02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
VFPPC_05830
Exosome [BR:
pchm04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
VFPPC_05830
CD molecules [BR:
pchm04090
]
Proteins
VFPPC_05830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_29
AAA_28
AAA_23
AAA_21
RsgA_GTPase
AAA_22
AAA_25
AAA_16
Motif
Other DBs
NCBI-GeneID:
28848953
NCBI-ProteinID:
XP_018141890
UniProt:
A0A179FGB2
LinkDB
All DBs
Position
5:1765076..1769254
Genome browser
AA seq
1295 aa
AA seq
DB search
MSEVSRDVLSSPGDSDETLTAAATVQDEVESTKMNETIEGSSFKSFIVRYSRFQLLKISE
ANGICVQRVFRYNDASGWVLNSVAFVSMIGAGTALPLMDVVFGGFVNVFNDFVTGKITPD
KYMDEVGRYTLYFVYIFIGRFSLIYIWTMLVNITAIRTTKNLRVDFVRQVLRQEISFFDT
PSISVSGQITTNGNLIYYGISEKLGLVIQALSMLISAFVVAFIVQWKLTLITLAIVPVNT
IIMLICIYFDTIYEYQMFDIYAESGSMAEEAFSTIRTAHAFWVFPKLAGRFNEVLNRARK
VGNKKSILYAILFPVEFFSITAGYGLAFWQGMQMYSRGEIQSPGTVVTVIFAVLVAAQAL
TQIAPQVIAISKAMAAAQDLFSTIDRESAIDSLSEGGERIQNFQGNIKLREVCFSYPSRP
TVPVVQDLDLDFPAGKITAIVGASGSGKSTIFGLLERWYSYAKGEITLDGHKLENINLRW
LRTNVRLIQQEPTLFSGTIYQNVVDGLSGTEDETIFDEEKKKSLVVTACKAAYIHDFIMR
LPSGYDTWVGERGALLSGGQKQRIVIARTIISDPKVLLLDEATSALDPSAEKIVQAALNN
IAKGRTVVIIAHRLSTIRESDNIILLARGKVAETGTHSELIALGESYARLVKAQDLGKNS
GPIHDISADSKEKSVAGKEITQASKTKDDITTSGGPIRKYGLLHGLFLIIQEQRVLWIPA
FVIFASCTAAGITYPAMAVLVSKSLEQYETTDVTKANFFALMFFVVALGNLCIFAAVGWL
SNVVAQTVMEFYRGDVFDNTLRQDMTFFNEPDNSTGALVSRLAAEPTSLQELLSINMALI
IICVTNLFASCILAIAYGWKLGLVLTCGALPFIVGSGYLRIRLESKFDEDTVQRFSSSSA
IATEAVIGIRTISSLALEQTFLDRYAKSLEGIARYAISSLGFKMLFYSLSQSVSMLAMGL
GFWYGGKLVSTGEYTSSQFYIVYLAVIFSSEAAAILFQHTTSISKAGTAINYIFGLRQTR
ILLDDEPGTEPQPDGDDEKLSLSNEKALEVSFDRVHFSYPLRPDQRVLKGIDINIGSGKK
VAFVGASGCGKSTLVALLERFYDPVTGTIRAYGRDIKSLNRRRYRRNIALVQQEPVLYQG
SIEDNVSLGIEEGSPSEAQIIQACQSANIWNFIISLPEGLQTKCGTQGFSLSGGQRQRIA
IARALIRNPKLLLLDEATSALDTESENVVKAALDVAAAGRTTITVAHRLSTISDADKIIV
FSNGSIVESGTHDELLDRRGVYYEMVLAQSLDREA
NT seq
3888 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaagtgtcaagagatgttttgtcgtcccctggggactctgatgaaactctcact
gctgccgcaacagtgcaggatgaggttgagagcacaaagatgaatgaaacgattgaaggc
tcaagcttcaaatcctttatcgtgagatacagccgtttccaactcctaaagatttctgaa
gctaatggtatatgcgtccagcgcgtgttccgatacaacgacgcgtcaggatgggttctg
aattcagttgcctttgtgtccatgattggcgctggcacagcacttccactcatggacgtc
gtttttggggggtttgttaacgttttcaatgactttgttaccggaaaaataaccccagat
aagtacatggatgaagtcggccgatatactttatactttgtctatatttttatcggaaga
ttctcgctaatatacatatggacgatgctcgtaaacattacggcgatccgcacgactaag
aacctccgagtcgatttcgtccgccaagtcctacgacaggaaatctccttctttgatact
ccatctatatccgtttcaggtcagataactacaaatggcaacttaatatactacgggata
tcggagaagctcggccttgttatacaggcgttatcgatgctcatctctgcgtttgtggtc
gcctttatcgtgcagtggaaattgacactaatcaccttggccatcgtgccggtgaatacc
atcattatgcttatttgcatttactttgatacgatttacgagtaccaaatgttcgacatt
tacgctgagtctggatccatggccgaggaagcattctcgacaattcgcaccgcgcatgcc
ttttgggtctttccgaagctggctggtcgtttcaatgaagttcttaacagagcaagaaaa
gttggcaacaagaaatccatcttatacgcaattttattcccggtggaattctttagcatt
accgcaggatatggcctggccttctggcagggcatgcaaatgtactcgagaggggaaatc
caatctcctgggacggtggtaactgttatatttgcggtgttagtagccgcccaggctttg
acccaaatagcgccccaagtgatcgcaatatcgaaagccatggccgcagcacaagaccta
ttctctacaatcgacagagagtctgccatcgattcgctctcggaaggtggtgagaggatt
caaaacttccagggtaatataaaattgcgcgaagtttgcttttcgtatccatcgcggccg
actgtgcccgttgtgcaagacctcgaccttgacttccctgctggcaagatcacggctata
gttggtgctagtggttccggcaaaagtactatattcggccttctggagcgttggtactcg
tatgctaaaggcgaaattacactcgatggacataaactggaaaacatcaacctacggtgg
ctacgaacgaatgtccgcctgatccaacaggagcccaccctcttcagtggcactatttac
caaaatgtcgtggacggcctttccggtactgaagatgagactatattcgatgaagaaaag
aagaagagtcttgtggttacggcctgcaaggcagcgtatatacacgacttcatcatgcgt
cttccaagcggatacgacacttgggtaggagaacgaggtgcattattatctggcggtcag
aagcaacgcattgttatcgctcgaaccatcatatcggacccgaaagtactattgttagat
gaggcaactagcgccctagatcccagtgccgagaagattgtgcaagctgcactaaataac
atagcaaagggccgcactgtggttatcattgctcaccggctttcaactatcagggaaagt
gacaacattattctcttggctagaggaaaggttgcggaaaccgggacgcactccgagtta
attgcacttggggagagttatgctagactcgtcaaggcgcaagaccttgggaagaactca
ggcccaatccatgacatatctgctgatagcaaagaaaaatccgttgctggtaaggagata
acacaagcctcgaagacaaaagacgatatcacaacttctggtggtcctattcgcaagtat
ggactacttcatggtctgtttctcatcatacaagagcaaagggtgttatggataccggcg
tttgtgatctttgcaagctgcacggctgctggaattacatacccagcaatggcggttctg
gtatctaagtctttagaacagtatgagactactgatgtgaccaaggccaactttttcgcc
ttgatgttttttgtcgtcgcactcggcaacctatgtatatttgccgcagttggctggctg
tcaaatgtagttgcgcagaccgttatggagttctatcggggtgacgtcttcgacaataca
cttcgtcaggacatgacattcttcaacgagcccgacaacagcacaggcgccttggtctcg
aggctggcagcagaaccgacaagtctacaagagcttctatctatcaacatggctttgata
ataatctgcgtaactaatcttttcgccagttgcatcctagccatagcgtacggatggaag
ctaggacttgtcttaacttgtggagcgttgccttttatcgtcggctcaggctatttacgc
attcggcttgaatccaagtttgacgaggacactgttcaacggttctccagtagtagtgcc
atagcgacggaggcagttataggcattcgcacgatatcgtcacttgctcttgagcaaacg
tttctggatcggtacgccaaaagtcttgaaggtatcgcgcggtatgctattagtagcctt
ggctttaaaatgctcttctactctttgagtcagtcggtatctatgctggctatgggtctt
ggattctggtatggcgggaagctcgtatcaactggcgagtacacatcaagtcaattttac
attgtgtacttggcagtcattttctccagcgaggcagctgcgatactatttcagcataca
accagtatctctaaggcgggcaccgccattaactacatttttggcctccgacaaactcgt
attttgctcgacgatgagccaggtaccgaacctcaacctgatggcgatgatgagaagctg
tctctttccaatgaaaaggctctggaagtgtcttttgatcgtgttcacttctcttacccc
ttacggccggatcaaagagtgcttaaaggaatcgatatcaacattgggtccgggaaaaag
gtggcctttgttggtgcctccggctgtggaaagtctacgctggtcgcattacttgagcga
ttctatgaccctgtaactggtacaattcgggcatatggccgagatatcaagtccctcaat
cgacgcagatatcgccgcaacatcgcattggtgcaacaagaaccagtactataccaaggc
tcaatagaggacaacgtttcacttggaatagaagaaggcagtccctctgaagcacaaatt
attcaagcatgccagagtgccaacatatggaactttatcatctctctcccagaaggactg
caaacgaaatgtggcactcagggattctccttgtcaggcggtcagaggcaacgcatagcg
attgccagggcactcattcgcaatcctaagctactactgctggatgaagctacgagtgcg
ctagataccgaatccgaaaacgtagtaaaggcagctctggacgttgcagcggcgggaaga
accacgattacagtcgcacatcggctcagtacgatcagtgatgctgataaaattatcgtg
ttttctaacggaagtatcgtcgagtcgggcacccacgatgagttgctcgaccggaggggt
gtatattacgagatggtgttggcacagtcactagatagagaagcatag
DBGET
integrated database retrieval system