KEGG   Pochonia chlamydosporia: VFPPC_05873
Entry
VFPPC_05873       CDS       T09407                                 
Name
(RefSeq) rRNA processing protein RRP9
  KO
K14793  ribosomal RNA-processing protein 9
Organism
pchm  Pochonia chlamydosporia
Brite
KEGG Orthology (KO) [BR:pchm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pchm03009]
    VFPPC_05873
Ribosome biogenesis [BR:pchm03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    VFPPC_05873
SSDB
Motif
Pfam: WD40 WD40_Prp19 Beta-prop_TEP1_2nd WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 EIF3I WDR55 WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_DCAF12 Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd NBCH_WD40 WD40_MABP1-WDR62_1st Beta-prop_IFT122_1st Beta-prop_HPS5 Beta-prop_WDR19_1st WD40_like Beta-prop_SCAP PEP5_VPS11_N Beta-prop_IFT140_1st WDR54 Beta-prop_LRRK2
Other DBs
NCBI-GeneID: 28848989
NCBI-ProteinID: XP_018141931
UniProt: A0A179FGT3
LinkDB
Position
5:1870143..1871927
AA seq 594 aa
MSSFFTIPGSQKKRKRTSVPEAPKKRVAGAKTSTSKAASRPNGATKRRVERDESISGSDS
DDDENYDSPSDAGDDEDVEDRQSSDEEGETAAEKRLRLAERYLENVKEHVDEAGFDAADI
DRDLIAERLQEDVAETKGRVYRQLAAQLAFNKASQTFFRSNTNSVTSIAACSPFVYTATK
DLVLHKWRIQDLPQDQFPQTTKRKPKKPPAPPRKRPQLVAWIKGRKSKSKDRNYKRHTGQ
ILAVAASPDGKYVVTGGEDKKLIIYEADTLTPIKVMTHHRDAVTGLAFRRGTNQLYSSSR
DRTVKVWSLDELAYIETLFGHQDHVVDIDALAQERCVSVGARDRTARLWKVMEETQLVFR
GGAVDRKNIPQGVDPRSLLHEGSMDRISMIDDDLFVTGSDNGAIALWSVTKKKPVYIQPL
AHGLDPALDPLAASAEANPDAKKVVPAPTPRWITALRTIPYSDIILSGSWDGHVRVWKLT
EDKKKIEQIGVLGDFADDYDNDSVEDAPTANGTAESHRPIPGVVNDIAVFERGERGKDGL
CVVAAVAREHRFGRWKVFKDGVRNGGVVFEVSRIPTAEVNGNHEDAESVSDDDE
NT seq 1785 nt   +upstreamnt  +downstreamnt
atgtcgtcttttttcaccattcctgggtcccaaaagaagaggaagcggacctctgtccca
gaagcaccaaagaaaagagttgccggtgccaaaacatccacatccaaagcggcctcgaga
ccaaatggtgccaccaagcgaagagtcgaacgagacgagtcaatctctggtagcgactct
gacgatgacgaaaattacgacagcccctcagacgcaggcgacgatgaagacgtagaggat
cgccagagttcagacgaagaaggcgaaaccgcagccgagaaacgacttcgcctagctgag
cggtatctggagaatgtcaaggagcacgtggacgaagctggcttcgatgcagccgacatt
gaccgcgatttgatcgccgaacggctacaggaagatgttgctgagacgaaaggcagggta
taccggcaactagccgcgcaattggcattcaacaaggcgtcgcaaacttttttccgctcc
aataccaactctgttacatccatcgccgcatgctccccgtttgtatacactgcgacaaaa
gacctggttctacacaaatggaggatacaggatttaccccaggaccaattccctcaaaca
accaaacgaaaacccaagaagcctcctgcaccaccaagaaaacggccccaactggtggcg
tggatcaagggcaggaagagcaaaagcaaggacagaaattacaagaggcacactgggcaa
atcttggcggttgcagcatctcccgatggcaaatatgttgtgacgggtggcgaggacaag
aagttgattatctacgaggctgacacccttacgccaataaaagtcatgacacaccatcga
gatgctgttacagggctggcgttccgccgaggtaccaaccaactttattcatcgtcaaga
gacaggactgtaaaggtatggagcctggatgaactggcctacattgagacgttgtttggt
caccaagaccacgtcgtcgacattgacgcccttgcgcaagagcgctgcgtctccgttggc
gcacgagatcggacggcccggctatggaaagtcatggaggagacgcaactcgttttccgt
ggtggagcggtcgacaggaagaacattccacaaggggtcgatccccggtcacttctccac
gaaggaagcatggaccgcatttccatgatcgacgacgacctctttgtcaccggaagcgat
aacggggcaattgccctttggagtgtcaccaagaagaagccagtttatatccagccactt
gcacatggccttgatcccgccctagatcctctggccgcctccgcagaggccaatcccgac
gcgaaaaaggttgttcccgctcccacgccacgatggataaccgccctcagaacgataccc
tactcagacatcatcctcagtggtagctgggacggacatgtccgtgtatggaagctcacc
gaggacaagaagaagattgagcagattggtgtcctgggcgacttcgccgacgactacgat
aacgactcagttgaagatgctcctacagcgaacggcacagcagagtcacatcggcccata
cctggagtggtgaatgacattgccgtgtttgaacgaggtgaacggggcaaggatggactt
tgtgtcgttgctgctgtggcacgggaacaccgctttggaaggtggaaagtgttcaaggat
ggtgtgcgtaatggcggcgtggtatttgaggtgtcgaggatacctaccgcggaagtgaat
gggaaccatgaggatgcggaatcggtttctgatgacgacgagtga

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