Pochonia chlamydosporia: VFPPC_05873
Help
Entry
VFPPC_05873 CDS
T09407
Name
(RefSeq) rRNA processing protein RRP9
KO
K14793
ribosomal RNA-processing protein 9
Organism
pchm
Pochonia chlamydosporia
Brite
KEGG Orthology (KO) [BR:
pchm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pchm03009
]
VFPPC_05873
Ribosome biogenesis [BR:
pchm03009
]
Eukaryotic type
90S particles
Other 90S particles
VFPPC_05873
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
EIF3I
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_DCAF12
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
Beta-prop_HPS5
Beta-prop_WDR19_1st
WD40_like
Beta-prop_SCAP
PEP5_VPS11_N
Beta-prop_IFT140_1st
WDR54
Beta-prop_LRRK2
Motif
Other DBs
NCBI-GeneID:
28848989
NCBI-ProteinID:
XP_018141931
UniProt:
A0A179FGT3
LinkDB
All DBs
Position
5:1870143..1871927
Genome browser
AA seq
594 aa
AA seq
DB search
MSSFFTIPGSQKKRKRTSVPEAPKKRVAGAKTSTSKAASRPNGATKRRVERDESISGSDS
DDDENYDSPSDAGDDEDVEDRQSSDEEGETAAEKRLRLAERYLENVKEHVDEAGFDAADI
DRDLIAERLQEDVAETKGRVYRQLAAQLAFNKASQTFFRSNTNSVTSIAACSPFVYTATK
DLVLHKWRIQDLPQDQFPQTTKRKPKKPPAPPRKRPQLVAWIKGRKSKSKDRNYKRHTGQ
ILAVAASPDGKYVVTGGEDKKLIIYEADTLTPIKVMTHHRDAVTGLAFRRGTNQLYSSSR
DRTVKVWSLDELAYIETLFGHQDHVVDIDALAQERCVSVGARDRTARLWKVMEETQLVFR
GGAVDRKNIPQGVDPRSLLHEGSMDRISMIDDDLFVTGSDNGAIALWSVTKKKPVYIQPL
AHGLDPALDPLAASAEANPDAKKVVPAPTPRWITALRTIPYSDIILSGSWDGHVRVWKLT
EDKKKIEQIGVLGDFADDYDNDSVEDAPTANGTAESHRPIPGVVNDIAVFERGERGKDGL
CVVAAVAREHRFGRWKVFKDGVRNGGVVFEVSRIPTAEVNGNHEDAESVSDDDE
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcttttttcaccattcctgggtcccaaaagaagaggaagcggacctctgtccca
gaagcaccaaagaaaagagttgccggtgccaaaacatccacatccaaagcggcctcgaga
ccaaatggtgccaccaagcgaagagtcgaacgagacgagtcaatctctggtagcgactct
gacgatgacgaaaattacgacagcccctcagacgcaggcgacgatgaagacgtagaggat
cgccagagttcagacgaagaaggcgaaaccgcagccgagaaacgacttcgcctagctgag
cggtatctggagaatgtcaaggagcacgtggacgaagctggcttcgatgcagccgacatt
gaccgcgatttgatcgccgaacggctacaggaagatgttgctgagacgaaaggcagggta
taccggcaactagccgcgcaattggcattcaacaaggcgtcgcaaacttttttccgctcc
aataccaactctgttacatccatcgccgcatgctccccgtttgtatacactgcgacaaaa
gacctggttctacacaaatggaggatacaggatttaccccaggaccaattccctcaaaca
accaaacgaaaacccaagaagcctcctgcaccaccaagaaaacggccccaactggtggcg
tggatcaagggcaggaagagcaaaagcaaggacagaaattacaagaggcacactgggcaa
atcttggcggttgcagcatctcccgatggcaaatatgttgtgacgggtggcgaggacaag
aagttgattatctacgaggctgacacccttacgccaataaaagtcatgacacaccatcga
gatgctgttacagggctggcgttccgccgaggtaccaaccaactttattcatcgtcaaga
gacaggactgtaaaggtatggagcctggatgaactggcctacattgagacgttgtttggt
caccaagaccacgtcgtcgacattgacgcccttgcgcaagagcgctgcgtctccgttggc
gcacgagatcggacggcccggctatggaaagtcatggaggagacgcaactcgttttccgt
ggtggagcggtcgacaggaagaacattccacaaggggtcgatccccggtcacttctccac
gaaggaagcatggaccgcatttccatgatcgacgacgacctctttgtcaccggaagcgat
aacggggcaattgccctttggagtgtcaccaagaagaagccagtttatatccagccactt
gcacatggccttgatcccgccctagatcctctggccgcctccgcagaggccaatcccgac
gcgaaaaaggttgttcccgctcccacgccacgatggataaccgccctcagaacgataccc
tactcagacatcatcctcagtggtagctgggacggacatgtccgtgtatggaagctcacc
gaggacaagaagaagattgagcagattggtgtcctgggcgacttcgccgacgactacgat
aacgactcagttgaagatgctcctacagcgaacggcacagcagagtcacatcggcccata
cctggagtggtgaatgacattgccgtgtttgaacgaggtgaacggggcaaggatggactt
tgtgtcgttgctgctgtggcacgggaacaccgctttggaaggtggaaagtgttcaaggat
ggtgtgcgtaatggcggcgtggtatttgaggtgtcgaggatacctaccgcggaagtgaat
gggaaccatgaggatgcggaatcggtttctgatgacgacgagtga
DBGET
integrated database retrieval system