Pochonia chlamydosporia: VFPPC_05919
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Entry
VFPPC_05919 CDS
T09407
Name
(RefSeq) chromatin assembly factor 1 subunit C
KO
K10752
histone-binding protein RBBP4
Organism
pchm
Pochonia chlamydosporia
Pathway
pchm03082
ATP-dependent chromatin remodeling
pchm03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pchm00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
VFPPC_05919
03083 Polycomb repressive complex
VFPPC_05919
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pchm03036
]
VFPPC_05919
Chromosome and associated proteins [BR:
pchm03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
VFPPC_05919
Histone modification proteins
HAT complexes
HATB complex
VFPPC_05919
HDAC complexes
Sin3A-HDAC complex
VFPPC_05919
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
VFPPC_05919
PRC2.2
VFPPC_05919
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
VFPPC_05919
Heterochromatin formation proteins
Other heterochromatin formation proteins
VFPPC_05919
Chromatin remodeling factors
NuRD complex
VFPPC_05919
NuRF complex
VFPPC_05919
NuRF complex (fruit fly)
VFPPC_05919
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
CAF1C_H4-bd
WD40_Prp19
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
WD40_WDHD1_1st
Beta-prop_WDR75_1st
EIF3I
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
Beta-prop_EML
MIOS_WD40
WD40_MABP1-WDR62_2nd
NBCH_WD40
Beta-prop_SPT8
Beta-prop_IFT122_1st
WD_LRWD1
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_DCAF12
Beta-prop_RIG_1st
Beta-prop_SCAP
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Motif
Other DBs
NCBI-GeneID:
28849028
NCBI-ProteinID:
XP_018141989
UniProt:
A0A179FGF5
LinkDB
All DBs
Position
5:complement(2034427..2036067)
Genome browser
AA seq
439 aa
AA seq
DB search
MPPAQVSDPDVDVEMNHEEDDDQVERLINEEYKTWKKNSPFLYDMILGTALTWPTLTVQW
FPDVKEPEGKNYRMHRLLLGTHTSDESTNFLQIADVQIPKAVTPNPANYDEERGEIGGYG
NSSDVAAIKCDIVQKIEHPGEVNKARYQPQNPDIIATLCVDGKILIFDRTKHPLQPTTLG
KVNAQIELVGHKSEGFGLAWNPHEAGCLASGSEDKTMCLWDLKTLEAESKILKPSRRYTH
HTQVVNDVQYHPISKNFIGSVSDDQTLQIVDIRHDNTSTAALVARRGHLDAINALAFNPN
SEVLVATASADKTVGIWDLRNVKEKVHTLEGHNDAVTSLSWHPSEAGILGSGSYDRRIIF
WDLSRVGEEQLPDDQDDGPPELLFMHGGHTNHLADFSWNPNEPWLVASAAEDNLLQIWKV
AESIVGKDDGELPVDELDR
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgcctccagctcaggtatccgatcccgacgttgatgttgaaatgaaccatgaagaggat
gatgatcaggttgagcgcctcatcaacgaagagtataagacatggaagaaaaacagcccc
tttctatacgatatgattctggggacggccttgacgtggccaactctgactgtccagtgg
ttcccggacgtcaaggaaccagagggcaagaactaccgcatgcaccgcctgctccttggc
acgcatacgtccgacgagagtacaaatttcctgcagattgccgatgttcaaatccccaaa
gctgtcacgccgaacccggccaattacgatgaggagcgaggcgaaattggtggctatgga
aactctagcgacgttgctgccatcaaatgcgacattgtccagaagattgagcatcccggt
gaggtaaacaaggctaggtatcagcctcaaaacccagatatcatcgccacgctttgtgtc
gatggcaagatcctcatctttgaccgcaccaagcaccctcttcagccaaccactcttggc
aaggtgaatgcccagattgagctggttggtcacaagtcggaagggttcggcctcgcctgg
aatccccacgaggctggatgcctagcttccggaagtgaagacaagacaatgtgcctatgg
gacttgaaaacgctcgaggccgaatccaaaattctcaagccgtcgcgcagatacactcac
catacacaggttgtcaatgatgtgcaatatcatcccatctcgaagaatttcattgggtct
gttagtgacgaccaaacacttcaaattgttgatatcagacatgacaacacatctacggca
gctctcgttgctagacgcggccatctcgatgcaattaatgcccttgctttcaaccctaat
tcagaagtccttgttgctaccgcctctgcagacaagactgttggcatctgggatctaaga
aacgtcaaagagaaggttcacaccctcgagggacacaatgatgccgtgacgagcttatca
tggcacccaagtgaggctggaatcttgggtagtggtagctacgacaggagaatcatattt
tgggatctctctcgcgtgggagaagagcaactgcctgatgaccaagatgacggaccccca
gaactgctcttcatgcacggcggacataccaatcaccttgccgacttcagctggaacccc
aacgagccatggctagttgccagtgccgccgaggacaatctgctgcaaatctggaaggtc
gcagagtctattgtcggcaaggatgacggcgagttgcctgtcgatgagcttgaccgatag
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