Pochonia chlamydosporia: VFPPC_05986
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Entry
VFPPC_05986 CDS
T09407
Name
(RefSeq) pre-mRNA-processing protein 45
KO
K06063
SNW domain-containing protein 1
Organism
pchm
Pochonia chlamydosporia
Pathway
pchm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pchm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
VFPPC_05986
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pchm03041
]
VFPPC_05986
Spliceosome [BR:
pchm03041
]
Complex B
Other components
Prp19-related factors
VFPPC_05986
Complex C
VFPPC_05986
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SKIP_SNW
Motif
Other DBs
NCBI-GeneID:
28849090
NCBI-ProteinID:
XP_018142069
UniProt:
A0A179FGN4
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Position
5:complement(2249743..2251547)
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AA seq
578 aa
AA seq
DB search
MASIAASLQASLPQPKYTGEDEEAPSRTQQRGPRIVGAGQIDETQIVLKRSGPPPYGQRS
GWRPRSQEDFGDGGAFPEIPVAQYPLDMGKKGASTSNALAVQVDSAGKVQYDAIARQGHS
QGRIIHTSFKDLIPLRQRADAGEIDLARPDKDAVAASTEKTKNALAALVSGAVAAQRPKN
VNVGNRNDPTFVRYTPASQMGDNGQKQDRIMKIVERQRDPMEPPKFKHKKIPRGPPSPPP
PVMHSPPRKLIAEDQEMWKIPPPVSNWKNPKGFTVPLDKRLAADGRGLQDVTINDKHAQF
AEAVKMAERHAREEVQQRALMQQRLAEKEKAQKDENLRALAQKAREERAGAGGGRRRSPD
SRDSRSRSRSYSGSDSASDSEDSDIRERENARRERRKEEERKLRQNRMGAERRVQVMARE
QNRDISEKIALGLAKPTQSKETMYDSRLFNQSSGFDSGFNEDNHYDKPLFAAQDAISSIY
RPRANMEDDDPEAGDKEMAKIQKTSRFGEALGKGTFKGAADVEAREGPVQFEKEVADPFN
VDKFLSEVDQNSSSKRGYGLQDEERQSKRPRVVDDEED
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgatcgctgcgtcgctacaagcgtcgcttccacaaccgaaatacacgggagag
gatgaggaagcaccttccagaacacaacaacggggaccgcgtatcgtgggcgctggccag
attgacgagacacagatcgtcttgaagcgatccggccctccgccgtatggacaaagatca
ggatggcgtccacgatctcaagaagactttggcgatggcggtgcttttcctgagattcca
gtagcacaatatccgttggatatggggaagaagggtgcttcaaccagcaacgcgctggcc
gtccaagttgattcggcgggcaaggttcaatacgatgcgattgcgcggcaaggacacagc
cagggtcgaatcatacatacatcatttaaggatctcattccgttaagacagcgcgctgat
gctggcgagattgatttggcccgacctgacaaggacgctgttgcagcttcgaccgagaag
accaagaacgcgctggcagctctggttagcggtgcggtcgcggcgcagaggcccaagaac
gtcaatgttggaaaccgaaatgacccgactttcgtacggtatacgcccgccagtcagatg
ggcgacaacgggcagaagcaggatcgaataatgaagattgtcgagcggcaacgagaccca
atggaaccgcccaaattcaaacataaaaagatcccgcgagggccaccatcgccgcctccg
ccggtcatgcactcaccacctcggaagctcatagccgaggatcaagaaatgtggaagatt
cctccgccggtctcaaactggaagaaccctaaaggatttacggtgcctctggacaagcgc
ctggcggcggatggtcgtggcttgcaagacgttactatcaatgataagcatgctcaattt
gccgaggctgtaaagatggctgagagacatgcccgagaagaggtccagcagcgagcattg
atgcagcagagattagcggaaaaggaaaaggcacaaaaggacgagaatctgcgagcactg
gctcaaaaggctcgggaggaacgtgcgggcgctgggggcggtcgccgacggtcacccgac
tcaagagactcgaggtcacgatcgagaagctacagtggatctgattcagcatctgacagc
gaagattccgatatcagggagcgtgagaatgctcgacgagagagacgcaaggaagaggaa
aggaagcttcgacagaatcgcatgggtgcagaacgtcgtgttcaagtgatggcgagggaa
caaaaccgagatatttcagaaaagattgcccttgggttagccaagcccacacagtccaag
gagacaatgtacgattcacggctatttaaccagtccagcggtttcgatagcggattcaac
gaggacaatcactatgacaaaccgctgtttgcagctcaagacgccatcagcagcatttac
cgaccgcgagcgaatatggaggacgacgaccctgaggcgggcgacaaggagatggccaag
attcaaaagactagtcggtttggagaagcactgggcaagggaactttcaagggagcggca
gacgtagaggcccgcgaaggaccagtgcaattcgagaaggaggtggccgatccgttcaac
gtggacaagttcttgtccgaggttgaccagaattcgtcgtcaaagagaggatatgggctg
caggacgaggagcgacaatcaaaacggccgagggtggtggacgatgaggaggattga
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