Pochonia chlamydosporia: VFPPC_06088
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Entry
VFPPC_06088 CDS
T09407
Name
(RefSeq) COPII coat assembly protein SEC16
KO
K20353
COPII coat assembly protein SEC16
Organism
pchm
Pochonia chlamydosporia
Brite
KEGG Orthology (KO) [BR:
pchm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pchm04131
]
VFPPC_06088
Membrane trafficking [BR:
pchm04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
VFPPC_06088
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
Motif
Other DBs
NCBI-GeneID:
28849178
NCBI-ProteinID:
XP_018142206
UniProt:
A0A179FH99
LinkDB
All DBs
Position
5:<2615377..>2621393
Genome browser
AA seq
1982 aa
AA seq
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MAAEPTSTWHPAMMPNTTADAVAPIQKPKVADSTHDASPGLPKIEDHDPTNAWFDKDGED
EDEADAWLVSEDAEPAEPIEATEPINSSQETEKTKGYAPRQSHTHDEQERSEDAADAWLT
NGHHEGGALLLSGEKEQDISGEEPETTAQQDRADEAPVNEPPTEEPTQPEGMNSKDTSPE
ITGPSQTVAQHSSSMSFARTVSHEVSFGDDDDGEWNLGRSDTDTFGFMPPSNRTNSFPVV
PPMASESELRHALPLPTNQALDVMEEDEKEAELEEEEYMMRSPEGDSSASWQRHSGTRGK
HAPSRSIGGEIAEASTTAEAARFEEGVPLIPQSETGNEAHAVRADPFGEEDANDDDFFAQ
VQDTDNQNDWDSNIRPLERKSTMQAMASTDDGVSLMHQTTLDETIEEHADESAEGVALGI
PETDEPAPLTEDLESKWEQAFGEDEDDDFLLDDSAAENKEDIDAAAFLGSDDEGLLDDTL
DEPVPAPQPSQPRQNPYVPTNAAGQPPPPTLTPTAATAATSQFSPAVPYGGAAQYGQTPP
RPEAARAESFADKSKEGYASPYDLPTDLVSKTVKPRKRPSLQQLPQETALPPPRSASMYS
PGQAAPPASAPPTSSAPPVPSTQPQGPQLSQKASAPALRSKSGFFEELPMMSKPRSASRQ
SQRAPSPGQYAPAPPQQQAPPPAASQAVPPPASGAVAPPTHTANQPPTPQQLPGETQTPP
GVADLVAPPKTNPYANLQAQAPSVTPPSSSSSRYSPAPAAQQGGGVSLASRYSPAPSAGS
RPNSSYGAGPPHTVLPHLPRTSSPLAHFESSGATDGQHFDRRTSSSFEPRLNRVSSLPPT
REVDEEEDEEALSPGNRSFSASHTAVADVAESRYSPASPVCAARYTPPLPSANGAPAAAL
SPPKRINSNYAPQPASASASAPAPAPAPNSFAPPSRAHTQSPGYTHNAARKGSRSSESGH
RPSSAHAHAQPAPAVTKPTQSAHGPISRARGQSLTNMVPPTDGREHDPLERWRGAPVMSW
GVGGTFVSTFPKSIPRYAMGQTMPVTVRTVGEVKVQNIKDLDPLQDHLAKFPGPLKGKSK
KKEAVAWLSAGIESMERELPDVSFHSQLSLEAKRSIERLLLWKLLRVFIEHDGVLEGTPV
VDKAVRQILAPETTELPGEGAPLFTGAETTAAGVTSMQADGVDSGAIEKIRLDLLKGHRE
TAVWSAVDKRLWGHAMIISQTVSPALYKQVAQEFVRKEVNYPGHNNEPLAALYKVLSGNY
DDCVDELVPSHARAGLQLVSTETSSGPTKDAMDGLDKWRETLTLVLSNRSNDDIRGLNAL
GKLLSSYGRAEAAHICFIFSRQLSVFGGLDDPNADFVLVGSDHRRQSDQFAKETEALQLS
EVYEFGLTLGGGVTAAAGAPHLAAYKLQHAVTLAEYGFRDKALQYCDHIATAISSQTRRS
PYHHAILEASVEDFLARLKQAPKEASSSWISKPTMGKVSDSMWNRFNKFVSGDEDGNGQP
GSDGDNGPFARIAASPNVSRPPSTSNFDVYGSPPAAYPSATAPPAAAGTAAARYAPAPTA
SYPAANANPYLPAAQGQLSPVSTFSTNNVPEYSPNPYEPSYPGVPASQPQTAGYQPVGYP
GSAAPSKYQPAGSAPAPVVQQEPPPAARAGTSGMYQPYGLQESPDIQPSSAVDKANQGYQ
PTTYGYEPPQMAPTAADSQEQETSGTSGYEPPSFQPYGYEPPSYQPDVEDDDAPKPKKKS
FMDDDDDDIPALRKSQDKSKSEKDRENEEMFRKAAEEDAKRAAAASTKKGWGFGGWFGGG
KKADGNIGEASPGKAIRAKLGEESSFVYDPDLKRWINKKPGAENVEAKKATPPPPRAGPR
SVSGTPPPRAAGTPPPPAAGRSSVPPMGAMPPRSMAGNLTTAQSMENLTARAALGAPPAP
LPRSVSSNNTGSAGPSTGPPSRPTTSMSNASSIDDLLGAPAPRKAGQKKPRKSGRYIDVM
AK
NT seq
5949 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgagccaaccagcacatggcacccggccatgatgcccaacaccaccgccgat
gcagttgcaccgattcaaaagcctaaagtggctgattcaacccatgatgcatcgcccggt
ctcccaaaaatcgaagaccacgatcccaccaatgcttggtttgataaggacggcgaggac
gaagatgaagccgacgcctggctggtatccgaggacgctgaacctgcagaacccatcgag
gccactgaacctataaactcttcacaggagacagaaaagacaaagggatacgccccgaga
caatcacatacccatgacgagcaagaaagatcggaagacgctgcagatgcttggctgaca
aacggccaccatgagggaggtgcgttgttgctctccggggagaaagagcaggatatatct
ggagaagagcccgaaaccacagcacaacaggatcgggctgacgaggcgcctgttaatgag
ccgccgacggaggagcccacacaaccagaaggaatgaactcaaaagacacaagccctgag
atcacgggtccgtcgcagaccgtggcccagcactccagctccatgtcctttgctcggact
gtctcccacgaggttagctttggcgacgatgacgatggagagtggaacctgggtcgatcc
gacacggacacgtttggcttcatgccgccatcaaatcggaccaactcgtttcctgtcgta
cctcccatggcgtccgagtccgagctgcgccatgccctaccgctccctaccaaccaggct
ctcgacgtcatggaagaagatgaaaaagaggccgaacttgaagaggaggagtacatgatg
cgaagccccgaaggcgacagctctgcatcgtggcaaaggcacagtggtactcgaggtaaa
catgcgccgtcccgatccattggcggcgaaattgcggaagcatccaccactgctgaagcg
gctcgatttgaagagggtgtaccccttattccacaatccgagacgggcaacgaagcacac
gcggtcagagccgacccattcggagaggaggacgcaaacgatgacgactttttcgctcaa
gttcaggacacggacaatcaaaatgactgggacagcaacatcagacccttggagcggaag
tctacaatgcaagcaatggcttccacggatgatggcgtttcgctcatgcatcagaccact
cttgatgaaaccattgaagaacatgctgatgagtctgctgaaggcgttgcgcttggcatt
ccagagacggatgaaccagcacccttgaccgaggacctggaatctaagtgggagcaagca
tttggagaagacgaggatgacgattttcttctcgatgattcagcagcggagaacaaggag
gacattgatgcggcagccttcctcggcagcgatgacgagggtctgcttgatgacaccttg
gacgaacctgtgcctgctcctcaaccctcacaacctcgacaaaacccgtacgtcccaacg
aacgcggcgggacaaccaccaccaccaacactcaccccaactgctgccacggctgcaacc
tcccagttttccccagccgtgccatacgggggcgctgctcagtatggacagacaccaccg
cggcctgaagctgcccgagccgagagctttgcggacaagtccaaagaagggtatgcctcg
ccgtacgatttgcctaccgacctggtctccaagaccgtcaaaccacgcaagcgacccagc
cttcaacaattgccccaggaaacagcacttcctcctcccaggagtgccagcatgtattca
ccggggcaggcggcgcctcctgcgtccgcaccgccgacttcatccgctcctccagtccct
tctactcagcctcagggtcctcaattgagtcaaaaagcctcggcacccgccctgcgctca
aaaagcggtttctttgaggaattaccaatgatgtctaagccaagatcggcttcgagacag
agtcagcgagcgccatcgcccggccagtacgcacctgcgccgcctcaacaacaagcacct
cctccagcggcatcccaagctgtccccccaccagcatcaggagctgttgctcctcccacg
cacacggcaaaccaacctccaacacctcagcagctgcccggcgagactcagacaccacct
ggtgtggccgacttggttgctccccccaagacgaacccttacgccaaccttcaggcccag
gctccctccgtgaccccgccatcgagcagctcgtctcgatactcgcctgcaccggcagcc
cagcaaggcggcggtgtttctcttgccagccgctattcgccagcgccgtcagctggatca
cgccctaacagctcttatggcgctggccctcctcacaccgttcttcctcacctgccacgt
acctccagccccttggcacattttgagagtagtggtgccacagatggacaacactttgac
cgacggacgagctcttcattcgagccaagattgaatcgagtgtcgtctttgccgccaact
agggaagtagatgaggaggaagacgaagaagctctgtctcctggaaatcggtcgttcagt
gccagtcatacagctgtggctgacgttgccgagtctcgatatagccctgcgtcacccgtt
tgcgcagctcggtacactcccccgttaccctctgccaacggtgcaccagccgctgctctg
tcacctcctaagagaatcaactccaactacgcacctcagcctgcatcagcatccgcatca
gcgccagcgccagcgccagcgccaaactcatttgctccgccttcccgagctcacacgcaa
tctcctggttacacgcacaacgctgctagaaagggcagcaggtcgtcggaatccggtcat
cgaccttcgtccgctcatgctcacgcacaaccagccccagccgtgacaaagcctactcaa
tctgcgcatgggcccatctctcgtgctcggggtcaatcacttaccaacatggtgccgccc
actgatggtagagagcacgatcctcttgagagatggaggggagcgccagtcatgtcctgg
ggagtcggtggaacgtttgtttcaacgtttcccaagagtatcccccgatatgccatgggg
cagaccatgccagttaccgtacgcacagtgggtgaagtcaaggttcagaatattaaggat
ctagaccctcttcaggatcacctggccaaatttcctgggcccctcaagggaaagtccaaa
aagaaggaagcagttgcttggctctcggctggcattgagtccatggaaagggaactccct
gatgtctctttccactctcagctatctctggaagcgaaacgctccatcgaacggctcttg
ctatggaaactattgagagtcttcatcgaacatgacggagtgcttgagggcactcctgtc
gtggacaaggccgttcggcaaatcctggcccctgagacgacggaactgccgggcgaaggc
gctccactgttcacgggagctgagacgaccgccgcaggcgtcacctcgatgcaagccgat
ggtgtggactcgggagccattgaaaagattcgcctcgacctgctcaagggacatcgcgag
acggcagtctggtctgccgtggacaagcgtctctggggtcatgccatgattatttctcag
acagtttctccggctctttataaacaagtcgcccaagaatttgtacgcaaggaggtcaac
tacccaggccataacaatgagccccttgctgccctgtacaaggttctgtctggaaattat
gacgactgcgtggacgaacttgtaccttcgcatgctcgtgctggactgcaactcgtgtcc
acagagacttcctctggtcctacaaaggatgccatggatggtcttgacaagtggcgtgag
acattgactcttgtgttgagcaatcgaagcaacgacgacatccgaggactcaatgctctg
ggtaagcttttgtccagctacggccgcgccgaggccgcacatatttgcttcatctttagc
agacagctatcagtttttggcggcctcgacgaccccaacgcggacttcgtcttggttggc
tcagaccatcgcagacagtctgaccagtttgccaaggagaccgaggccctgcagctcagc
gaagtctacgagttcggactcacacttggtggaggcgtgacggcggcagctggagcgcca
catctcgctgcttacaagcttcagcacgccgtaacccttgccgagtacgggttccgagac
aaggcgctgcagtactgcgatcacattgccactgccatcagctcgcaaacgagaaggtcc
ccgtaccaccatgccattctcgaagcctccgtggaagactttttggcaaggctgaagcaa
gcacccaaagaggcatcatcgtcgtggatatccaagcccacgatgggcaaggtatctgat
agcatgtggaaccggtttaacaaatttgtttcaggagatgaggatggaaatggccagcct
ggatcagatggtgataacggaccatttgctcgcattgctgcctcgccaaacgtttccaga
ccaccgtctacttccaatttcgacgtctatggctcccccccagcagcctatccatccgca
acggcgcctcctgcagcagctggtaccgccgctgctcgatatgctccagcaccaaccgcc
tcctaccctgccgcgaatgccaatccataccttccagcggcacaggggcagctctcgcca
gtgtcaaccttttcgacgaataatgtccccgaatactcgcccaacccgtacgaacctagc
tacccaggggtgcccgccagccagccgcaaactgctggataccagccagtcggctatcct
ggatcagccgcaccttcgaagtatcaacccgccggatcagctccggctcccgttgtccaa
caggagccacccccggcagcccgagcgggaacttctggcatgtaccaaccgtacgggctt
caagagtcgccagacattcaacccagttctgcagttgacaaagccaaccaaggataccag
ccgacaacatatggctatgagccccctcagatggctcccaccgcagctgacagtcaagaa
caggagacgagtggtacgagtggatatgagccaccgtcgtttcaaccatatggatatgag
ccgccttcgtaccagccagatgttgaggacgatgatgcacccaagcccaagaagaagagc
ttcatggatgacgatgatgacgatatcccagcactgagaaaatcacaggacaagtcaaag
tccgaaaaggaccgggagaatgaggagatgttccgcaaggcggctgaagaagatgccaag
cgagcagcagcagcaagtaccaaaaagggatggggttttggcgggtggtttggtggtggc
aagaaggcagacggcaacattggtgaagcttcgcctggcaaagctatcagagccaagctt
ggtgaagagagtagcttcgtgtatgaccctgatctgaagcggtggatcaacaagaagcct
ggtgccgagaatgtcgaagccaagaaggccacgccaccacctcccagggctggtccacgc
tctgtgagcggcacacctcctccacgggctgctggcacaccaccaccacccgccgctgga
cgatccagcgttcccccaatgggcgcaatgcctcctcgatccatggcagggaatctgact
actgcccaatccatggagaacctgactgctcgtgctgctctcggcgcccctccagcacct
ctcccacggtctgtgtccagcaacaacacaggatctgcagggccatccactggtccgcct
agtagacccacgaccagtatgagtaacgcaagcagcattgacgacttgctcggtgccccg
gctcccagaaaagcaggccagaagaagccgagaaagagcggccgatatattgacgtcatg
gcaaagtaa
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