Pochonia chlamydosporia: VFPPC_06420
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Entry
VFPPC_06420 CDS
T09407
Name
(RefSeq) TAF6-like protein
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
pchm
Pochonia chlamydosporia
Pathway
pchm03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pchm00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
VFPPC_06420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pchm03021
]
VFPPC_06420
03036 Chromosome and associated proteins [BR:
pchm03036
]
VFPPC_06420
Transcription machinery [BR:
pchm03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
VFPPC_06420
Coactivators
SAGA/TFTC/STAGA complex
VFPPC_06420
Chromosome and associated proteins [BR:
pchm03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
VFPPC_06420
STAGA complex
VFPPC_06420
TFTC complex
VFPPC_06420
SAGA complex
VFPPC_06420
SLIK complex
VFPPC_06420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
Histone
Bromo_TP
TFIID-31kDa
CBFD_NFYB_HMF
Motif
Other DBs
NCBI-GeneID:
28849448
NCBI-ProteinID:
XP_018142609
UniProt:
A0A179FI38
LinkDB
All DBs
Position
5:3716400..3717871
Genome browser
AA seq
465 aa
AA seq
DB search
MANEVPKPKLLWNSDNVKDVAESVGISSLNDEALKALTQDVEYRIGQVIIEALRLMRAAR
RTTLTVNDVSLALKVLDVEPLYGYDSTRPLRYGEASLGPGQPLFYIEDEEVDFEKLINAP
LPKVPRDMNFTAHWLAIEGVQPSIPQNPTTAESRSQELLPKGPGANPALAALAGNDNVAV
KPSVKHIVSKELILYFDKIQAAVLDDNPDEEVVRLRQAALGSVRDDPGLHQLVPYFINFI
MDRVTHHLDDTFTLRQMMELTNALIENKSLFLDPYASSLSAPALTCLMARKLGTDDGVDA
MKDQYDLRQLAASLVGRIARKYSGSNTLLRPKLTRTCLKYFLDPTKPPAVLYGAIYGLLE
AGGPEAIRVLVLRNMKTFDSAILQPMKERSEGSIEYEMLVQGLVQAIASLAQRGELGATN
GVNGAASGSELSDLTEFIGPIVGRKIATAGNRALVKTILDARSLE
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacgaggttcccaagccaaaactcctctggaactccgacaatgtcaaagacgtc
gccgagtccgtcggcatcagctccctcaatgatgaagctctcaaggccctcacgcaagat
gtcgaataccgcatcggccaggtcatcatcgaggcactgcgcctgatgcgcgcagctcgt
cggacaactctcaccgtcaacgacgtctccctcgccctcaaagtcctagatgtcgagccc
ctatacggatacgactccacgcgaccactacgctacggcgaggcaagcctgggccccggc
caaccgctattctacattgaagacgaagaggtggactttgagaagctgatcaacgcgccg
ctaccaaaagtaccacgagacatgaactttaccgcccactggctcgccatcgagggcgtc
caaccctccatccctcagaacccaacgaccgccgaatcccgctcacaagaactcctcccc
aaaggccccggtgcaaaccccgcgctcgccgccctcgcgggcaacgataacgttgctgtc
aaaccatctgttaaacacattgtcagcaaagagcttattttgtactttgataagatccaa
gccgccgtcctcgacgacaaccccgacgaagaagtcgttcgtttgcgtcaagcagcattg
ggctctgtccgtgacgacccgggcttgcaccagcttgtcccctactttatcaacttcatc
atggacagagtgacgcaccacctggacgatacgtttacactccgccagatgatggaactg
acgaatgccctcatcgaaaacaagagtcttttcttggacccctatgcgtcgtcattgtca
gcaccggcgcttacttgcctcatggctcggaagcttggcacagacgatggagtcgacgcc
atgaaggatcaatacgacttgcgacagctggcagcgtcattggtaggacgaattgcccgc
aagtattcaggctcgaatactctgctgcgaccgaaactcacgcgcacgtgcttaaagtac
tttttggatccaacgaagccacctgccgttttgtacggagccatctacggactcttggag
gctggtggtccagaagccattcgcgtcttggtgctacgaaacatgaagacatttgactcg
gctattttgcagccaatgaaggagagatcagaggggagcatcgagtacgagatgctggtg
caaggtctagtccaagcaattgcgtcgttggcgcaacgcggcgaattaggcgcaacgaac
ggtgtcaatggtgcagcgtcaggttcagaactgtccgacctgactgagtttattggcccc
atcgtcgggcgcaagattgcaacggcagggaatcgtgcgctggtgaaaaccattctcgac
gcccggtcattggaatag
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