Pochonia chlamydosporia: VFPPC_06763
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Entry
VFPPC_06763 CDS
T09407
Name
(RefSeq) DNA-directed RNA polymerase III largest subunit
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
pchm
Pochonia chlamydosporia
Pathway
pchm03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pchm00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
VFPPC_06763
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pchm03021
]
VFPPC_06763
Enzymes [BR:
pchm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
VFPPC_06763
Transcription machinery [BR:
pchm03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
VFPPC_06763
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
28849738
NCBI-ProteinID:
XP_018138528
UniProt:
A0A179F5K9
LinkDB
All DBs
Position
Unknown
AA seq
1222 aa
AA seq
DB search
MADLNPLRVLNLFKCISPIDCELLGLDPAEGRPEMFIWRYLPAPPVCIRPSVAQENASNE
DDLTTKLAEIVWVSGMIRSALHKGSSIDTIMEQWEYLQTQVAIYVNSDAPGLQQLSQGKS
IRGICQRLKGKQGRFRGNLSGKRVDFSARTVISPDPNLGIDEVAVPQPVAKNMTYPEKVH
RHNIAKLQACVRNGPDIWPGALAVIKKDDGEYKISLKFANKELVAHNLAVGDVVERHLED
GDIVLFNRQPSLHKLSIMSHFVKVRPWRTFRLNECVCNPYNADFDGDEMNLHVPQTEEAR
AEAMMLMGVRYNLITPKSGEPIIAATQDFITAAFLLSSKDRFFDRKTFMSICMDMLDGQI
LVDVPPPSIIVPRALWTGKQVFDILMRPNRQSPVMVNLDAKCKNFKASPGQRHCPDMDPY
DGWLVVRNSQVMCGLMDKSTVGTGKKDSIFYVILRDYGPDQAVIAMNRLAKLCARYLTRQ
GLSIGVADVFPAASLVRERDRLVSSAYHSCDNIISAFNAGRLEKASGCNMEQTLENSISG
ALNKVRQLAGEHCINTLSRNNAPLIMALSGSKGSNINVAQMIALVGQQIISGQRVPDGFQ
DRTLPHFHKNARQPDSKGFVRNSFYSGLLPTEFLFHAISGREGLIDTAVKTAETGYMSRR
LMKSLEDLSTQYDNTVRTSGGTIVQFQCGADKLDPANIEGPAGCPVHFQRTWTHAESLTW
DNGEPSLTPEEIRLVCSHELEMRRRHFSRKGLLKNEDLSYDDTSHYGIDEHESGRKFLSS
VRNYVNILADKLHKMQTMTNIYQISDTNQAESHTCQTAKVSMTTLRLFMKMCFEKYQKAH
TEPGHPVGAIAAQSIGEPGTQMTLKTFHFAGVAGMSITQGVPRINEIINASKNISTPVIT
CPLLNNRKMEVSRVVKARMEKTYLADVLRFVELEWRPEGGHIVLQIDTGTLASLHLGIAV
SDIAQAICGEKKLKILPSDIRINGNIITVHISGASGSPTRPGGERQARTAESSDMLLKAN
FLRRKLPSVVISGHSGATRALIESTEDNTYRILVEGQGLRACMTTAGVIGTQVTTNSVIE
CSEILGIEAARTTIVKEMDQVMGYMDIDHRHMHLLADAMTYKGEVLGITRYGLSKTRDSV
LHLASFEKTADHLFDAVAGMKTDRLDGVSESIILGQTTRIGTGGFKMVRRLGIQSFELCK
KPTLLEDSWRAQQKLKKFTTSL
NT seq
3669 nt
NT seq
+upstream
nt +downstream
nt
atggcagacttgaatcctctgagggtcctcaatctattcaagtgtatcagcccaatagat
tgtgagctactgggcttagaccctgctgaaggtcgcccagagatgtttatttggcgatat
ctcccagcgccaccggtctgcattcgaccctctgttgcgcaggagaatgccagtaatgag
gatgatttgactaccaagctggctgaaattgtgtgggtgagtggcatgatacgctccgcc
ttgcacaaagggtcatctatcgacacaatcatggaacaatgggaatatttacagactcaa
gttgctatttacgtcaatagtgacgcaccaggcttgcaacaactcagtcaaggaaagagc
attaggggcatatgtcaacgactgaaagggaaacagggacggttccgcggaaatctttcc
ggaaagagagttgacttttcagcacgcactgtcatatccccagatccgaatctcggtatt
gatgaggtggcagttccgcaaccggttgcgaagaacatgacttacccggagaaagttcac
cgtcacaacattgccaagctacaggcatgtgtcaggaacggcccggacatctggcctggt
gccttagctgtcatcaaaaaagatgatggagagtacaagatatcactcaagttcgccaac
aaggagctagttgcacataatctggctgtcggagacgtggtcgagcgccatctcgaagac
ggtgatattgttttattcaaccgccagccatcgcttcataagctcagcataatgagccac
tttgtcaaggttcgaccatggcgaacatttcgcctcaacgagtgcgtatgtaatccatat
aatgctgactttgacggcgatgagatgaatctgcatgttcctcagacggaggaagctcgc
gccgaggcaatgatgctgatgggcgttcgatataatttgatcacccccaaaagcggcgag
cctatcattgcagcaactcaggattttataacagcagctttccttctgagtagtaaggat
cgcttctttgaccgcaagacgtttatgtcgatatgcatggatatgctggacggacaaatc
ttagtggatgttccgcccccatcaattatcgtgccacgagcattgtggacaggcaagcag
gtatttgatatcctgatgcggccgaatagacagtcacctgttatggtcaatctcgatgcg
aaatgcaaaaacttcaaagcaagtccagggcagcgtcactgtcctgacatggatccctac
gacggatggcttgtggttcgaaactctcaggtcatgtgtggactcatggacaagtccact
gttggaacggggaagaaggattctatcttttacgtcattcttcgtgattacggtcctgat
caggctgtaattgccatgaatcgtcttgcgaagttgtgtgctcggtatctaacacgccaa
gggctctctattggcgttgccgacgttttcccagctgcaagtttggtacgagagagagat
cgcctcgtttccagtgcgtatcactcatgtgacaatataatttccgcctttaacgctggg
agactcgaaaaagcttcaggctgcaatatggaacaaactctcgaaaattctatatctggt
gctctcaacaaagtgcggcaactcgctggtgagcattgcatcaatacgctaagtcggaat
aatgcgccattaattatggccctgtcaggatcaaagggttcaaatatcaatgttgcacaa
atgattgcccttgttggtcaacagattatcagtgggcagagagtgcccgacggttttcaa
gaccgaacacttccacactttcacaagaatgctcggcagccggattctaaaggctttgtg
cgaaatagcttctactcggggcttctacctactgaattcttatttcatgccatctcggga
agagaaggactgatagacacagcagtgaaaactgcagagacggggtacatgtcacgtcga
ctcatgaagtctctggaggacctttctacgcagtatgataacactgttcggacgtctgga
ggcactattgtgcagtttcagtgcggagctgacaagctggatccggcaaatattgaaggc
ccagcaggttgcccggttcattttcaacggacttggactcatgctgaaagtcttacatgg
gataatggtgaaccgtcattgacaccagaggagataagattagtttgtagtcatgagctg
gagatgagacggaggcatttttcccgcaaaggtcttctgaagaacgaggacctgtcgtat
gatgacacaagccactacggaatcgacgaacacgaaagtgggcgcaaatttctatcatca
gtccgaaactatgtcaatatcttggctgataagctccacaagatgcagacgatgacgaac
atttatcaaatttcagacacaaatcaggcagagagtcatacatgtcagactgctaaggtg
tcgatgacaactttacgactcttcatgaagatgtgcttcgagaaatatcagaaagctcac
actgagcctggccacccagttggagccatcgcagcccaatctattggtgaaccgggaacg
cagatgactttgaaaacatttcactttgctggcgttgctggcatgagcatcacacagggt
gttcctcgtattaacgagattattaacgcgtctaagaatatcagcacgcctgttattact
tgtcccttgctcaacaaccgaaagatggaagtctctagggttgttaaagcccgaatggag
aagacttatctggccgacgttcttcggtttgttgagcttgaatggcggcccgaaggtggt
catatcgtcttacagattgacactggtacactcgcatctttacatctaggcattgctgta
tctgacatagcacaagcaatttgtggagagaagaagttgaagatactgccatcagatatc
agaattaacgggaatatcataaccgtccacatcagtggcgcttccggctcaccaaccagg
cctggaggtgaaaggcaagcaagaacagccgagtcctctgacatgctgctcaaagccaac
tttctgcgccggaaactaccgtcagtggtcatctcaggtcactcaggtgctaccagagcc
ttgatcgagagtactgaggacaatacataccggattctagtggaaggtcagggcttgcga
gcttgtatgacaaccgcgggggtaatcggtacgcaagttacgacaaatagtgtcatagaa
tgcagcgagatacttggcatcgaagctgctcgaacaacgatcgtaaaggagatggaccaa
gtcatggggtacatggacattgatcatcggcatatgcatttgctggcagacgcaatgacc
tacaaaggtgaggttcttggcatcactcgctatggattatcgaagactcgggatagtgtg
ttacatctggcttcgtttgagaaaacggcggatcatctgtttgatgcggttgcaggcatg
aagactgatcgattagatggggtgtctgagtctattatcctggggcaaacaacgaggatt
ggtactggcggtttcaagatggtaagacgtctgggcattcaaagttttgagctgtgcaag
aagccaaccttgcttgaggattcgtggagagcacagcaaaagttgaagaagttcacaact
tcactgtga
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