Pochonia chlamydosporia: VFPPC_06973
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Entry
VFPPC_06973 CDS
T09407
Name
(RefSeq) RNA recognition motif containing protein
KO
K03258
translation initiation factor 4B
Organism
pchm
Pochonia chlamydosporia
Brite
KEGG Orthology (KO) [BR:
pchm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pchm03019
]
VFPPC_06973
03012 Translation factors [BR:
pchm03012
]
VFPPC_06973
Messenger RNA biogenesis [BR:
pchm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
VFPPC_06973
mRNA cycle factors
Stress granule specific factors
VFPPC_06973
Translation factors [BR:
pchm03012
]
Eukaryotic type
Initiation factors
eIF-4
VFPPC_06973
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
28849908
NCBI-ProteinID:
XP_018140103
UniProt:
A0A179FBB6
LinkDB
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Position
7:291604..293558
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AA seq
537 aa
AA seq
DB search
MSLGDFLTDSGFGGGSWADEVEETYVTGTQPLPPSDRPRFGGGSTGMSNWQDRGYSSVRE
NLPQKLPDKPPFTAHLGNLAYDATNESVTEFFEGCEVVSVRIIEDREMQRPKGFGYVEFG
DLEGLKKALTLDGQSFNGRMIKIKIADPPRGGDSRGGESSRDLSDWTRKGPLPDLPGRRA
GPGSDFGGERERRPPRDPAAEPRAPREMNWERRGPLAPLPPQEGGPGPRDGSRTRPAPEG
LGERGESHRGSRQGSASWGEGRQDGSRPPRREQPERAPTAAEKDFQWRSNMRPDAPKPQE
ETESPASPTAPAPAQGGRPRLNLQKRTVSEATDAAATTPSGDAKASPFGAARPINTAARE
QEIEEKRQIAIREKREADEKAKEERKLAKQAAAEKEEAAAAAAAQAEEAAKEEAAKPAEN
EAEEKQNGASTEQKGAPRSREPREPKEQPKSRATESGNWRSASNEQRAPRGGPGNSRGGR
GGAARGPRNEGRGGHRANGAPAQQASAAQGAGDGEATTVDEDGWTTVPNKKGRPGRP
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgtccctgggggactttctgactgatagtggctttggaggaggctcttgggccgatgag
gttgaggaaacttatgttactggcactcagcctcttccccccagcgaccgacctcgcttt
ggcggtggcagcactggcatgtcgaattggcaggatcgaggttactcctcagtccgtgag
aaccttccccagaagcttcccgacaagccccctttcactgcccatctcggcaatcttgcc
tatgacgctaccaacgagagcgtcaccgaatttttcgagggctgcgaggttgtcagcgtt
cgtatcattgaggaccgcgagatgcagcgtcccaagggtttcggatatgttgagtttggc
gatctcgaaggactcaagaaggctttgactcttgacggacagtccttcaacggacgaatg
atcaagatcaagattgctgaccctcctcgtggtggtgatagccgcggtggcgaatcctcg
cgcgacctgagcgactggactcgcaagggacctcttccagacttgcctgggcgtcgtgcc
ggccctggttctgactttggtggtgagcgtgagcgtcgccctccccgtgaccctgccgct
gaaccccgtgctcctcgtgagatgaactgggaacgacgcggacctcttgctcctctgcca
cctcaagaaggtggccctggacctcgtgatggtagccgaacccgtcccgctcccgagggt
ctgggcgagcgtggtgagtctcaccgcggatctcgccaagggtctgcctcttggggcgag
ggacgacaagatggttcccgacctcctcgacgagagcagcctgagcgtgctcctactgcc
gccgaaaaagatttccaatggcgttccaacatgcgccctgatgcccccaagcctcaggaa
gagacggagagccctgcctctcccactgcacctgctcccgcccaaggtggtcgtccacgc
ctgaacctgcagaagcgaactgtttctgaggccactgatgctgctgccaccacgccaagc
ggtgacgccaaagcaagccccttcggagctgctcgacccatcaacaccgccgcccgcgag
caagaaatcgaggagaagcgacagattgccatccgcgagaagcgtgaagccgacgagaag
gccaaggaggaacgaaaacttgctaagcaggccgccgcagagaaggaggaggccgcagca
gcagctgctgcacaggctgaggaagctgccaaggaagaagccgccaaaccagccgagaac
gaggctgaggagaagcaaaacggggcctctacggaacaaaagggagccccccgaagccgg
gagcctcgggaacccaaggaacagcccaagtcgagggccactgaatcgggcaactggaga
tctgcttccaacgagcagcgcgcccctcgcggcggtccaggcaattctcgaggtggacgc
ggtggcgcagcccgaggacctcgcaacgaaggccgaggaggacaccgtgccaacggagca
ccagcccagcaagcttccgctgcccagggggcaggggacggcgaggccacgacagttgat
gaggacggatggacgacagtgccaaacaaaaagggacgtccgggacgcccgtag
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