Pochonia chlamydosporia: VFPPC_07059
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Entry
VFPPC_07059 CDS
T09407
Name
(RefSeq) ribosome biogenesis protein
KO
K14573
nucleolar protein 4
Organism
pchm
Pochonia chlamydosporia
Pathway
pchm03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pchm00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
VFPPC_07059
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pchm03009
]
VFPPC_07059
Ribosome biogenesis [BR:
pchm03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
VFPPC_07059
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_Rrp7
RRM_11
RRM_5
Motif
Other DBs
NCBI-GeneID:
28849976
NCBI-ProteinID:
XP_018140008
UniProt:
A0A179FA11
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All DBs
Position
7:complement(<568691..>570859)
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AA seq
722 aa
AA seq
DB search
MEIGSKNNRKRQRSEIGEIVSTSVEATGTESAQTKKRARVEERRSLFVRSLPANATNETL
ADFFSEHFPVKHAVVVVDQKTKESRGYGFVTLADSDDAVAAKDSLDRAEWGGKRIRIDIA
EPRKRNAENTGEAAPAKPGREEVQKPPKLIVRNLPWSIKTSDQLSNLFRSYGKVKFADLP
QSKGKLRGFGFVTIRGRKNAEKALEGVNGKELDGRTLAVDWAVDKETWEQQQELERVDEA
TAEEKDQEESNELGLDMGESNDADDDKISEPEQKDGLDADLENFMKNHMQNMEDEEDDDD
DDDDDIQQGGFSKPSPGKKTTDNTSTVFIRNLPFTTTDEQLKGFFSHFGIIRYARVVIDK
VTEKPAGTGFVCFLKEADAKSCIKEAPRPSASTAGVKPSLLLDENADPSGKYTLEGRLLQ
VAQAVNKVEAANLADNSLAKRREKDKRRLYLLSEGNIGRGSPLFDMLSPSEVQMRQTSAA
QRKKLVQSNPSLHISLTRLALRNIPRNIGMKELKELARKAVVGFAVDVKEGRRQPLSKEE
NARDGKDAKEKERQRKLKGKGIVRQAKVVFESNQGSKVDETSGAGKSRGYGFIEYTSHHW
ALMGLRYLNGYQLQGDNGRKQRLIVEFAIENANVVQRRRAAEEKSGQPQGRKAQPEAADM
GEVGQPRLRRQGKGVKDKSRAARGGDDDDQESEAKRAADMQHRLIARTRLMRKKKANARG
KN
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atggagattggctcgaagaataaccgaaagagacaacggtctgaaattggagaaattgta
tcaacatcagtagaagccactgggactgaatcagctcaaactaaaaagcgagcacgagtc
gaggagcgcagatcattgttcgtccgttcattgcctgcaaatgccacgaatgagaccctg
gcggattttttctctgagcatttccctgtcaagcatgccgttgtcgttgtcgaccaaaaa
accaaggaatctagaggctacggtttcgttacgctagcagattcggacgatgctgttgca
gccaaggactctttggatagagctgagtggggaggaaagcgtattcgcatcgatatcgca
gagccaaggaagcgaaacgcagaaaacactggggaggcggctcccgccaagcctggaagg
gaggaagttcaaaaaccaccgaaactgattgtaagaaaccttccatggagcatcaaaacc
tctgatcaactatcaaacctgttcagaagttatggaaaggtgaaatttgccgacttgcca
cagtcgaaaggcaagcttcgaggctttggattcgtcaccatccgtggcaggaagaatgca
gagaaagctttagaaggagtcaatggcaaggagcttgacggtcgtacattggcagtagat
tgggctgttgacaaggagacctgggagcaacagcaagaattggagagggtggacgaagcg
actgcagaggagaaggaccaggaggagagtaatgagttgggtctggacatgggcgagtca
aatgacgctgatgacgacaagatttctgagcccgaacagaaggatgggctggatgcagat
ctcgaaaatttcatgaaaaaccacatgcagaacatggaagatgaggaagatgacgatgac
gatgacgacgatgacatccaacaaggcggcttcagcaagccatcccctggaaagaagact
acggacaatacatccaccgtctttattcgaaatcttccatttacgacgacggacgagcag
ctcaaaggattcttctctcacttcggcattatccgctacgctcgagttgtcatcgacaag
gtcactgaaaaacctgctggaactggctttgtttgctttttgaaggaagctgatgccaag
tcgtgtatcaaagaggcacctcggccaagcgcatcaactgcgggggtgaagccgtcactc
ctcttggacgagaatgctgatcccagcggtaaatatacccttgagggccgactattacaa
gttgctcaagccgtcaataaagtggaagccgcgaatcttgcagataactcgctcgccaag
cgtagagaaaaggacaagcgtcgcctttacctgctttctgaggggaatattgggagaggc
tctcccctattcgatatgctcagcccttccgaagtccagatgcgccagactagtgctgcg
caacggaaaaagcttgtacaaagcaatcctagcctgcatattagtctcacaagactagca
ctgcgaaatattccgcggaacatcggaatgaaggagctgaaggagcttgctagaaaggct
gttgtcggttttgctgtggatgtgaaggaaggtcgtcgtcaacccctatccaaagaagaa
aatgccagggatggcaaggatgccaaagagaaagagcgtcaacggaaattgaagggcaaa
ggtattgttcgacaagctaaggttgttttcgagagcaaccaggggtcgaaggttgacgag
acgagcggcgctggaaagagtcgtgggtatggcttcatcgagtatacgtcacatcattgg
gctctcatgggattgcgctacctaaatggttaccagcttcaaggtgacaacggaagaaaa
cagcgcctaattgtggaattcgctattgagaacgcaaatgttgttcaacggagacgtgcc
gccgaggagaagtctggccaaccccaagggcgcaaagctcaacctgaagctgcggatatg
ggcgaggtgggacagccaaggctgcgaagacaaggcaagggagtcaaggacaaaagcaga
gcggcgcgaggcggtgacgatgacgatcaagagtccgaggcaaagcgggccgcggatatg
caacacaggcttattgctcgtacgaggctgatgcggaagaagaaagcgaacgcccgtggc
aagaattga
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