Pochonia chlamydosporia: VFPPC_07090 Help Entry VFPPC_07090       CDS       T09407                                  Name (RefSeq) pre-mRNA splicing factor syf-1   KO K12867   pre-mRNA-splicing factor SYF1 Organism pchm  Pochonia chlamydosporia Pathway pchm03040   Spliceosome Brite KEGG Orthology (KO) [BR:pchm00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     VFPPC_07090  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:pchm03019]     VFPPC_07090    03041 Spliceosome [BR:pchm03041]     VFPPC_07090 Messenger RNA biogenesis [BR:pchm03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     Other transport factors      VFPPC_07090 Spliceosome [BR:pchm03041]  Complex B   Other components    Prp19-related factors     VFPPC_07090  Complex C     VFPPC_07090 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  HAT_Syf1_CNRKL1_C HAT_Syf1_M HAT_Syf1_CNRKL1_N HAT_PRP39_N HAT_PRP39_C TPR_14 Suf TPR_8 TPR_2 TPR_15 TPR_10 RPN7 ARM_TT21 TPR_1 ARM_TT21_C Motif Other DBs NCBI-GeneID:  28850001 NCBI-ProteinID:  XP_022284174 UniProt:  A0A179F9Y7 LinkDB All DBs Position 7:<676194..>678761 Genome browser AA seq 816 aa AA seqDB search MASLSVIRSTTGFSSVVNEDFIYEQDVLRDPASAKPWLGYIKYKTRHGSLSQQNFVMARA CAQLPRSYKLWKMYLSFRVRHVSKLNPAVFAAEYGKVNSLFEKALILLNKMPRIWEMYLQ FLIKQPAITLVRRSFDRALRALPITQHNRIWTLYIPFANAASGDTALKIWRRYIQAHPEE AENFIELLIESGAYTEAAVSYINLLNNVRFASKNGKGHYELWTELVDLLVDHASEIEANY ESGVDVESIIRSGIARFPDQRGKLWVGLATYWIRRGNFERARDAFEQAITTVMTVRDFAL IFESYTEFEESIIKALMESATERLDTGEGDDDAELELDVRMMRFEYLMDRRPFLVNDVLL RQNPNLVSEWEKRVALWGDNKQEVVRTYTDAIASVHPKRAVGSFHKLWANYARFYEQGGD LRNARIIMEKAVKVPFKSVAELADMWIEWAEMELRNEKFDEAVRIMTKAVQAPKRSTVDY FDETLSAHQRVHKSWKLWSFYVDLVESVSTLSEVKRVYERIFELRIATPQTVVNYANLLE EHKYYEESFKIYERGLDLFSYPVAFELWNLYLTKAVDRKIGIERLRDLFEQAVEDCPPKF AKTIYLMYGNLEEERGLARHAMRIYERATRAVDDEDRADMFNFYITKSASNFGLSSTRPI YERAISALPDADAKEMCLKFADMEKRLGEIDRARAIYGHASQFCDPRTNAEFWARWEQFE VQHGNEDTFKEMLRIKRSVQAQYNTDVNFIASQALARSQHSSDSHDHPVGAMTELDRQSS ALQGFVAASEGTLSGKTSQPSQPVNPDVIDIDGLED NT seq 2451 nt NT seq  +upstreamnt  +downstreamnt atggcctccttaagcgtgattcggtcaacaacaggcttctcatcggtggttaatgaggac ttcatatacgagcaagacgtgctacgcgatccagctagcgccaaaccttggctaggatac atcaaatacaagactcgccatgggtccctgtcgcagcaaaatttcgtcatggcgcgcgcc tgtgcacaattaccgcgatcatacaagctctggaagatgtatctatctttccgcgttagg cacgtctcaaagctaaatccagctgtcttcgctgccgaatatggcaaagtcaactctttg tttgaaaaggcccttatacttctgaataagatgcctcggatatgggagatgtatcttcaa tttctcattaaacagccggcaatcactttggtgagacgaagctttgaccgtgccttaagg gcgctaccaattactcagcataatcgaatatggactctatatataccatttgcgaatgcc gcgtcgggtgacactgccctcaaaatctggcgacgatatattcaggcacatccagaagag gccgagaactttatcgaacttcttatcgagtcaggtgcctacaccgaagcggcagtaagc tacatcaacctcttgaataatgttcgattcgctagcaagaatggaaagggccactacgag ttatggaccgagctggtagatctccttgtagaccatgcttccgaaattgaggcaaactac gagtcgggcgtggatgttgagagtatcataagaagcggaatagctcgctttcctgatcag agaggcaaactgtgggtaggtctcgcgacgtactggattcgaagaggcaatttcgaacgc gcacgagatgccttcgagcaggctattacaactgttatgacggtcagggattttgctttg atattcgagtcttacacggaattcgaagagtccataatcaaggcgctgatggaaagtgca acagagcgccttgatacaggagaaggcgacgacgatgctgagcttgaattggatgtacga atgatgcggttcgagtatctgatggaccggaggccgtttttagtcaacgatgtgcttctt cgccaaaatccaaatcttgtctcagagtgggaaaagcgagtggccctatggggggacaat aaacaggaggttgtgcgcacgtataccgatgctatcgcatccgtccacccgaagcgagcc gtagggtcattccacaagctctgggcgaattatgcacgcttttatgagcagggaggggat ttgagaaatgctcgcatcatcatggagaaggcggtcaaggttccttttaaatccgtcgcc gaactagctgacatgtggattgaatgggcagaaatggaactgcgaaatgagaagtttgat gaagcggtccggatcatgacgaaggccgttcaagctccgaagcggtcgacagtcgactac ttcgacgaaacactctctgcgcatcagagggtccacaagagttggaagctctggagtttc tacgtggatctcgtggaaagtgtctcgaccttaagcgaagtcaaaagagtgtatgaacgc atttttgaacttcggatcgcgacaccacagactgttgtcaactacgccaatcttttggag gagcataagtattacgaagagtcattcaaaatttatgagaggggtttggatctattcagc tatcctgtagcattcgagctatggaacctatatcttacgaaggcagtagatcgaaaaatt ggtattgagcgacttcgagatctcttcgagcaagctgtcgaggattgtccaccgaaattt gcaaagactatctacttgatgtacgggaacttggaggaagagcgtggcctagcacgacat gcgatgcggatatacgagagagcaacgagggccgttgacgatgaagatcgtgctgatatg ttcaatttctacattactaaatctgcttctaattttggcctgtcgtctacgcgccctata tatgaaagggccatatcagcattgccagatgctgacgcaaaggagatgtgccttaagttt gccgatatggagaaacgattgggtgagattgacagagcccgggcaatctacggacacgca tcgcagttttgtgatcctcgaacaaacgccgagttctgggcgaggtgggaacagtttgag gttcagcacggtaatgaagatacattcaaggaaatgctgcgcatcaaaaggagcgttcag gcgcagtacaataccgacgtcaattttatcgcatcgcaggcgcttgctcgaagtcaacat agttcagactcacatgaccatcctgtcggtgccatgacggagctcgacaggcaatcctcg gcgctgcagggctttgttgcagcaagcgaaggcaccctgtcaggaaagactagccagcca agtcaaccagtcaacccagacgtgatcgatattgacggccttgaggattga

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