Pochonia chlamydosporia: VFPPC_07107
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Entry
VFPPC_07107 CDS
T09407
Name
(RefSeq) transcription Factor IIF, Rap30/Rap74, interaction
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
pchm
Pochonia chlamydosporia
Pathway
pchm03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pchm00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
VFPPC_07107
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pchm03021
]
VFPPC_07107
Transcription machinery [BR:
pchm03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
VFPPC_07107
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
28850017
NCBI-ProteinID:
XP_018139949
UniProt:
A0A179F9P0
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Position
7:732500..734687
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AA seq
673 aa
AA seq
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MPGQPSTSQNGAHRSQKPNPLRPMRKRPRPANPLVAPSRKTPGKPTTKSASTLGQQTGLN
GSKTTSDGQREQYGGWSEPPPQYQYNDIPIMTTKKSLLEGLRYHLMKFSQARVSDTPIDP
TNQDEFARPVTLHRRDARQPPPGRAVKEEEPEPIQVDEKEAERLAQLKAEREAQRAIDQA
KIAPVMKENTPKRPKKQKEEKTMFNRAPKSEAAKKESDLRYEEALPWHLEDADGKNVWVG
SYVAALSEANVAFMIDKSVFRMVPLEKWYRFNAKPPFQPFTIDQAEAFMNRKVDVGRWVM
KDEEKRAGQSDLEATRRLLYGRGQMIKTESATFKAASRSEKLEHDELDVSGDEFQDDDET
PYFERVEDDDLKESKERIRREQLGANLFGEGDEQEVDKELQEQLREELERQKYGKSTKKA
LIKRDREDIYESDDSEEKPWSSSSDDESSAEEEEETNKDEEKKDADAKESQIETKDKAKG
AGSKGSITPQSKQRPGELTKKTKSLKRAGSPALSESSGNESSRKKMKKSSASGNGSRAGT
PAAQSNMARRSKAGHASTSDGEATAGEMSDSVVPVRKGVKMVGNSGKGTPVASRAGSPNP
ATAGVSPSTQTAGIEPWEILDKIPQDGIAITDLIKQFHGRVGDRPGQMSRGEWIKLVKQL
CDYGPDKRLRRRK
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgcctggacaaccttcaactagtcaaaatggagctcatcgcagccaaaagccgaaccct
ctccgtccgatgcggaaacggccgagaccggccaatcctcttgttgccccgtccaggaag
acgcccggtaagccgactacaaagtcagcatctacccttggtcaacagacggggttaaat
ggttccaaaacaacctccgacggccaacgggagcagtacggcgggtggtctgaacctcct
cctcagtaccaatacaatgacattcctattatgacgaccaaaaagtctttgctagaaggt
cttcgctatcatctcatgaagttctctcaggccagggtgtccgacactcccatcgaccct
actaaccaagacgagtttgcccgaccggttacgctgcacagacgagacgctcgacagcct
cctcctggaagagctgtcaaggaggaggagccagaaccaattcaagtggacgaaaaggag
gcggagagattggcgcaactcaaggctgaacgagaggcccaacgtgcaatcgatcaagcc
aagattgccccagtcatgaaagaaaacacccctaaacgccccaagaagcaaaaggaagag
aaaaccatgtttaatagagctcccaagtccgaagctgcgaagaaagaatcggatcttcgc
tatgaagaagcccttccttggcaccttgaagatgctgatggaaagaacgtgtgggttggc
agctatgtagctgctctttccgaagcgaacgttgcattcatgattgacaaatctgttttc
cgcatggtgcccttggagaagtggtacagattcaatgcgaagccaccgtttcaacctttc
accattgatcaagcagaggctttcatgaatagaaaagttgacgtcggcagatgggtgatg
aaagatgaagagaagagggctgggcagagtgatctggaggcaaccaggaggctcctgtat
ggtcgtggccagatgattaagaccgaaagtgccactttcaaggcagcatcgcggtcagag
aaactggagcatgatgaattggacgtatctggagacgaatttcaagatgatgatgaaaca
ccatatttcgagcgcgtagaagacgatgacctcaaagaatcaaaagagaggatccgccgg
gagcagctaggagcgaacttatttggggaaggagatgaacaagaagtcgacaaagaattg
caagagcaattgcgagaggaacttgaacggcagaaatacggcaaaagtactaaaaaggct
ctgatcaagcgagatcgagaggacatttatgaaagcgatgactctgaagagaagccatgg
agcagttcgtccgacgatgaatcaagcgccgaggaagaagaggagaccaacaaggatgag
gagaagaaggatgcagatgccaaagaatcacaaatcgagacgaaggacaaagcgaaaggc
gcgggctccaaaggatcaataacgccacagtcaaaacaaaggccaggtgaactgaccaaa
aagaccaaatctttgaagcgagctgggtccccagctttgtccgagtcgagtgggaatgaa
tcatcccgcaaaaagatgaagaagtcgtctgcgtcaggtaatggcagccgcgctggtact
cctgcagctcagtcaaacatggcacgccgcagtaaggcaggacatgcatctaccagtgac
ggggaagccacagcaggagagatgtccgacagtgttgtgccggttagaaaaggagtaaag
atggtcggtaatagcgggaaagggacgccagttgcgtcaagggccggcagccctaatcct
gccacggcgggtgtctcgccgagtacgcagacggctgggatagagccgtgggagatacta
gacaaaatacctcaagacgggattgccatcacagatttgataaaacaattccacggtagg
gtaggcgatcgccccggccaaatgtcccgcggcgagtggataaaattggtcaagcagctc
tgcgactacgggccggataagcgtcttagacgacgaaaataa
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