Pochonia chlamydosporia: VFPPC_07131
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Entry
VFPPC_07131 CDS
T09407
Name
(RefSeq) Fip1 like protein
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
pchm
Pochonia chlamydosporia
Pathway
pchm03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pchm00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
VFPPC_07131
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pchm03019
]
VFPPC_07131
Messenger RNA biogenesis [BR:
pchm03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
VFPPC_07131
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
28850037
NCBI-ProteinID:
XP_018139921
UniProt:
A0A179F9Y3
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Position
7:complement(805228..806412)
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AA seq
333 aa
AA seq
DB search
MNSDLSEHEMEMDEGDDLYEPEEPKVNQDDKKPTVSKTEELEEGEEEDESGAMDEDDDDS
DIDIITERKDGTTAAPPTQSKYSDIRNIPQRSTSGDSPAKPAPTKPEEDSKAQSNVKNVA
APSADKASAAASKSTIDINANPMYPPAGKPITHVNIDEDLPDNEKPWRKPGTDISDYFNY
GFDEFTWALYAAKQESIRGEFGADAFASNNKKMMEDFNSMMMMGGMGMPGAAGGGGTSMQ
GMDGIPPEMQAMMQQMMASGMDPSQMDPSQMSAMFSGMQNGGAGSGAQGNQGQNFGGGFG
GNQGGYGYDQGMSTGAGGRGGFSGGGRGRRGRW
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgaattccgacttgtcggagcacgaaatggagatggatgagggcgacgacctctacgag
ccagaggagcccaaggttaaccaggatgataagaagccaaccgtctctaaaaccgaagag
ctagaggaaggagaagaagaagatgagagcggcgcaatggatgaagatgacgatgattct
gatattgatattattaccgagagaaaagatgggactacagcggcacctccgacacaatcc
aaatatagcgacattcgtaatatcccccaacgatcgacatctggcgattcacccgcgaaa
ccggcaccgacaaaaccggaagaggattcaaaggcgcagagcaatgtgaaaaacgtggca
gcacctagcgcggacaaggcgtctgcagccgcgtctaaatctacgattgatataaatgcc
aacccgatgtatcctcctgccgggaagcctataacacatgtcaatattgatgaggatctt
cccgataacgaaaagccgtggcgaaaaccaggcactgacatcagtgactatttcaattat
ggctttgacgagtttacttgggctctgtatgcggccaagcaggagagcattcggggagag
tttggggctgacgccttcgcatctaacaacaagaagatgatggaagacttcaatagcatg
atgatgatgggaggtatgggaatgcctggcgcggctggtggaggaggaacatctatgcaa
ggcatggatggaatcccccctgagatgcaggccatgatgcaacagatgatggcatcggga
atggatccatcccagatggatcccagtcaaatgagtgcaatgttttcgggtatgcaaaac
ggcggcgctggttcaggagcacaggggaaccaaggacagaactttggcggtgggtttggt
ggcaatcaagggggctacggctatgaccaaggcatgtccacgggagctggaggacgcggc
gggttcagcggcggtggacgtggccgcagaggacgctggtaa
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