KEGG   Pochonia chlamydosporia: VFPPC_07131
Entry
VFPPC_07131       CDS       T09407                                 
Name
(RefSeq) Fip1 like protein
  KO
K14405  pre-mRNA 3'-end-processing factor FIP1
Organism
pchm  Pochonia chlamydosporia
Pathway
pchm03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:pchm00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    VFPPC_07131
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pchm03019]
    VFPPC_07131
Messenger RNA biogenesis [BR:pchm03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     VFPPC_07131
SSDB
Motif
Pfam: Fip1
Other DBs
NCBI-GeneID: 28850037
NCBI-ProteinID: XP_018139921
UniProt: A0A179F9Y3
LinkDB
Position
7:complement(805228..806412)
AA seq 333 aa
MNSDLSEHEMEMDEGDDLYEPEEPKVNQDDKKPTVSKTEELEEGEEEDESGAMDEDDDDS
DIDIITERKDGTTAAPPTQSKYSDIRNIPQRSTSGDSPAKPAPTKPEEDSKAQSNVKNVA
APSADKASAAASKSTIDINANPMYPPAGKPITHVNIDEDLPDNEKPWRKPGTDISDYFNY
GFDEFTWALYAAKQESIRGEFGADAFASNNKKMMEDFNSMMMMGGMGMPGAAGGGGTSMQ
GMDGIPPEMQAMMQQMMASGMDPSQMDPSQMSAMFSGMQNGGAGSGAQGNQGQNFGGGFG
GNQGGYGYDQGMSTGAGGRGGFSGGGRGRRGRW
NT seq 1002 nt   +upstreamnt  +downstreamnt
atgaattccgacttgtcggagcacgaaatggagatggatgagggcgacgacctctacgag
ccagaggagcccaaggttaaccaggatgataagaagccaaccgtctctaaaaccgaagag
ctagaggaaggagaagaagaagatgagagcggcgcaatggatgaagatgacgatgattct
gatattgatattattaccgagagaaaagatgggactacagcggcacctccgacacaatcc
aaatatagcgacattcgtaatatcccccaacgatcgacatctggcgattcacccgcgaaa
ccggcaccgacaaaaccggaagaggattcaaaggcgcagagcaatgtgaaaaacgtggca
gcacctagcgcggacaaggcgtctgcagccgcgtctaaatctacgattgatataaatgcc
aacccgatgtatcctcctgccgggaagcctataacacatgtcaatattgatgaggatctt
cccgataacgaaaagccgtggcgaaaaccaggcactgacatcagtgactatttcaattat
ggctttgacgagtttacttgggctctgtatgcggccaagcaggagagcattcggggagag
tttggggctgacgccttcgcatctaacaacaagaagatgatggaagacttcaatagcatg
atgatgatgggaggtatgggaatgcctggcgcggctggtggaggaggaacatctatgcaa
ggcatggatggaatcccccctgagatgcaggccatgatgcaacagatgatggcatcggga
atggatccatcccagatggatcccagtcaaatgagtgcaatgttttcgggtatgcaaaac
ggcggcgctggttcaggagcacaggggaaccaaggacagaactttggcggtgggtttggt
ggcaatcaagggggctacggctatgaccaaggcatgtccacgggagctggaggacgcggc
gggttcagcggcggtggacgtggccgcagaggacgctggtaa

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