Pochonia chlamydosporia: VFPPC_07151
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Entry
VFPPC_07151 CDS
T09407
Name
(RefSeq) GYF domain-containing protein
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
pchm
Pochonia chlamydosporia
Brite
KEGG Orthology (KO) [BR:
pchm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pchm03019
]
VFPPC_07151
Messenger RNA biogenesis [BR:
pchm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
VFPPC_07151
Surveillance factors
Other surveillance factors
VFPPC_07151
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
GYF_2
Motif
Other DBs
NCBI-GeneID:
28850054
NCBI-ProteinID:
XP_018139898
UniProt:
A0A179F9Q5
LinkDB
All DBs
Position
7:complement(876653..881448)
Genome browser
AA seq
1439 aa
AA seq
DB search
MTSNLPSSFASAAAGQNANRDARGARGDGRGPAGGDWSRRDGRSANGTLTLRRSSTTPIG
QASQSTPSADHAVQQPLPVDTAPVLPSNFKTSSAQYTRDDLLAMFQPGTAVDDASRLFIS
GWDPTHVNGGNVRGWGKTNDNHVPQEPGACWDQNGDTAPMGLRDLSIEEKEAFSTEINSP
LKPPTQNKEGHQGNVNGRKASVSQGSGNAFGVISPSSATRPGTRRRETIESNPFSGALAS
PTAAGRYSREDSSPWTQRRSNDLRESEPDDGDAEVTARETSSKLPFGNLIRSNTAGSAGM
TSMWPSSNPATPGGGGFGNFAMPSSAVGDKRVGGAAPGGSGSRLAHLIPKDSTDSSATKP
GDSQNPPTQQSWRSRPRTDTDPFGDDELSGSAVLGGAQDTGSAGHTHASRVGVLGTPVKG
STSDFGMSGLNLGAPSGHEGQASPSETNPYRSPPGERHEHDETEAGSGEQPLGPGHHEAP
ANFGSISRGFGAPNFEGSDRSQTSSVGAKGYPLGNLSGWPAPAGPSSGTPDRDRPNFGNA
FGSALFSPVGDLQSPGLSNLGNVFGAPGAGIGAGSIGRGSKLGSLFPAAMQAQMQGHDQE
HGMSDTIQGHPLGAIGRGNLQGPARDTGSPMRPNRGVFEELFPSSDTGRSQTGFSASDNA
QQVGAGAPQSFTPVTGGLPFGGGQATTDPAGSQVRQMVMPDRMRWVYLDPQGHMQGPFTG
LEMNDWYKANFFTPDLRVKKIEDSDFEPLGQLIRRIGNSREPFLVPQIGIPHGPAPQGGP
FNPTTGGAGGVIPPLSGVFPSFGRTLTAEEQNNLERRKQEEQYMMAQQREFLMRQQSMPK
FPMPGPGLQHHSSAHSLQSQPSFGSMTSPIGGPPQQPIGAAAPQHGSFPDTQTGGQTASR
GGAGNGDPFRADELVGLSAAERDILATMRDEATEEQQQAADLGFRAGLPDTEHLPEDQEG
FRGRLKEFEELRAQHDADQLADMISAKEAESVVDALQDSSSTQRPARGGKGKKKMSEDGT
LSLTQQVQKAQAAAAAGMQPIETDMPMPFPPPSSTTPLPAPTAQRARSNLPEQYSRSQSG
TPDASQPPPLAPWAKDPGQEGAKGPSLKEIQEAEARKAAKAEEAAAALRKAAMEQEAAVM
REKEKQAAVAAAAGLPASSTWGHGSPVSASSPWTKPGTTKGPSSGPTTSSSASSKKTLAE
IQREEEVRKQKAKDVAVQSGAPANISKSYANLAGKPTLMPSTATPPAASPSAAGWATVGA
GGKVKAPTGPAVAQMPRSLSSSNVKAQAVSPAKSISKPTSAVGSSIGKTETANLAMEEFN
KWTLRELSRGGLTTDVTAFQSGLNMLPLDASLIAEAVYGSSTTMDGNRFGTEYVRRKKLA
EKGVVEKQSPGEAAKSPSAGGGWSEVAKRSGSTQPKDNDAGNIQAAGFKVVPGRKKGKK
NT seq
4320 nt
NT seq
+upstream
nt +downstream
nt
atgacgtccaatctcccttccagctttgcctcggctgcagctggtcagaatgcgaatcgg
gatgcgaggggtgccagaggagatgggaggggacctgctggaggcgactggtcacgtaga
gacggtcgatccgcgaatggcaccctcactctccgacgatcgtcaactacccccatcggc
caagcttcacaatcaactccttctgccgaccacgctgttcagcaaccactcccagttgac
acagcccccgtgcttccctcaaatttcaagactagctccgcgcaatacaccagggatgac
ctactggccatgtttcaaccaggaacagccgttgatgacgcatcccggcttttcatatca
ggctgggaccctacacacgttaatggtggtaacgtgaggggttggggaaagaccaacgat
aaccatgttccacaagagcctggagcatgctgggatcaaaatggagatacggcccccatg
ggcttgcgagacctttccatcgaggaaaaggaggctttttctactgagataaactcaccc
ttgaaaccaccaacacaaaacaaagaaggacaccagggaaatgtcaacggccgaaaggct
tcagtttcccaaggttctggcaacgcgtttggagtcatctcaccctcttccgctactcga
ccgggcacgcgacgacgagaaaccatcgaatcgaacccatttagtggtgcactcgcctcc
cccacggcagccggacggtattcccgagaggattcctcaccttggacgcaacgacgaagc
aacgatttgcgagagtctgagcctgatgacggtgacgcagaggtaactgcacgagaaacc
tcgagcaagcttccgtttgggaatctgattcgctcgaatactgccggcagtgcgggaatg
acatccatgtggccttcgtcgaatcctgcaaccccgggaggtggcggtttcggcaacttt
gcaatgccctcatctgcagtcggagacaaaagagttggtggcgctgcgcctggcggaagt
ggtagtcgtctggctcacttgattccgaaggattctacagatagtagtgctactaagccc
ggcgactcccaaaaccctcctacgcagcagtcctggcgctctcgccctcggactgacact
gacccatttggtgacgacgaattatctggaagcgctgtgcttggtggagcgcaagatacg
ggcagcgctggacacacccatgccagccgcgtcggtgttctgggcactcctgtgaaaggc
tcgacaagtgactttggaatgtctggcctcaaccttggggcgccgtctgggcatgaagga
caagcaagtccgtcggagactaacccgtatcgcagcccgcctggggagcggcacgaacac
gatgaaacagaggcaggcagtggtgagcagcctcttggaccaggacatcatgaagcgcca
gccaatttcggttctatatctcgtggttttggtgcgcctaattttgagggcagcgaccgg
agtcagacatcaagtgtgggcgccaagggttatccactaggaaatttgtctggctggcca
gctccagccgggccgtcctctggcaccccagacagagaccgtccaaactttggcaatgcc
tttggtagcgctctcttcagtccggtcggggaccttcagtctcctggtctatccaacttg
ggcaacgtattcggtgcacccggtgctggcattggtgctggcagcatcggccgtggcagc
aaactgggttctctcttcccagcggcgatgcaggctcagatgcaaggccatgaccaggaa
cacggtatgagcgacacaatacagggccatccgttaggagcaattggccgaggcaatttg
caagggccggcacgcgatactggaagtcccatgcgacctaatcgcggtgtctttgaggaa
ctgttcccgtcaagtgataccggccgatcccaaaccggcttcagcgcgtctgacaatgct
caacaagtgggcgctggagcaccacagtcgttcacaccagtcaccggaggtcttcccttc
ggcggtggccaggccaccacggatcctgctggaagccaggtaaggcaaatggtcatgccg
gacaggatgcgatgggtgtatcttgatcctcaggggcatatgcaagggcctttcacgggg
ttggaaatgaacgattggtacaaggcaaatttcttcactccagaccttcgggtgaagaag
attgaagactctgacttcgagcccctgggacaactcatacgccggattggcaactcgcga
gaacccttcctagtgcctcaaatcggtattccacacgggcctgcaccccaaggcggacca
ttcaatcctacaacaggtggcgctggtggtgttattccaccgctaagcggagtcttccct
agctttggaagaaccctgactgcagaggagcagaacaacctcgagcgtaggaaacaggag
gagcagtatatgatggctcagcaacgggagtttttaatgcgccaacagtcgatgccaaag
tttccaatgccaggcccgggtctccaacatcattccagcgcccacagtctgcagagccag
ccaagcttcggtagcatgacgtcgcctatcggcggccctcctcaacaacccatcggcgcc
gccgccccgcagcatggttccttcccggatactcaaaccgggggtcagactgccagcaga
ggtggtgcgggaaacggagacccgtttagagcagacgaattggttggcctgtctgctgct
gagcgtgatatccttgccactatgcgtgacgaagcaacggaagagcaacagcaagccgca
gacctgggttttcgggcaggtcttccggacaccgagcatctcccagaggaccaagaaggt
tttcgtggcaggttgaaagaatttgaggagcttcgtgctcagcatgacgcggaccagctg
gccgacatgataagtgcgaaagaagctgaatctgtggtcgacgctctccaggacagttcc
tccacccagcgtcctgccagaggagggaaaggcaaaaagaaaatgtccgaggacggaacc
ctgtctctcacgcagcaagtccagaaagcccaggctgctgctgctgccgggatgcagcct
attgagaccgatatgccaatgcccttccctcctccttcatctaccactcctctacccgca
ccaaccgctcaaagggcacgatccaacctacctgagcaatatagccgatcccaaagcggc
acacccgatgcttctcagccgccgcccttggccccgtgggcgaaggatcccggccaggag
ggggcaaaagggccaagtctgaaagagattcaagaggcggaggctcgcaaggctgccaag
gctgaagaggctgcggccgcactccgcaaggctgccatggaacaggaggctgccgtgatg
cgagaaaaggagaagcaggctgctgtcgccgctgctgccggacttccggcctctagcacc
tggggccatggctcacctgtttccgcctccagcccgtggaccaagcctggaacgaccaag
ggaccgtcttccgggccgacaacatctagctctgccagcagtaagaaaacattggcagaa
attcaacgtgaggaggaagttcgcaaacaaaaggcaaaggatgtagctgttcaatctggt
gctccagccaatatttccaagagctatgccaatctcgcaggcaaacctactcttatgccc
tccacagcaacgcccccggccgccagtccatctgcagctggctgggcaactgttggcgcc
gggggcaaggttaaagcaccaaccgggccagctgttgcacaaatgccacgatccttgagt
tccagcaatgtcaaagctcaggctgtatcccctgccaaaagcatcagtaagccaacgtcg
gccgtgggtagctccatcggtaaaactgaaacagcaaacctggcgatggaagaattcaac
aagtggacgttgcgagagctttcccgaggtggcctcacaactgatgtaaccgcgttccaa
tccggtttaaatatgcttccgctcgacgctagcctcattgcggaggcggtatatggatcc
tctactacaatggacggcaaccgctttggcacggagtatgtccgacgtaaaaagctagct
gagaaaggcgtcgttgagaaacagtctcctggggaggctgctaagtcaccttcagctggg
ggtggctggagcgaagtcgcaaagcgaagtgggagcacccagccaaaggacaatgatgct
ggaaacattcaagctgccggcttcaaggtggttccaggccgaaagaagggcaagaaatag
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