Pochonia chlamydosporia: VFPPC_07335
Help
Entry
VFPPC_07335 CDS
T09407
Name
(RefSeq) nuclear pore complex subunit
KO
K14300
nuclear pore complex protein Nup133
Organism
pchm
Pochonia chlamydosporia
Pathway
pchm03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pchm00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
VFPPC_07335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pchm03019
]
VFPPC_07335
03036 Chromosome and associated proteins [BR:
pchm03036
]
VFPPC_07335
Messenger RNA biogenesis [BR:
pchm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
VFPPC_07335
Chromosome and associated proteins [BR:
pchm03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
VFPPC_07335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_C
Nucleoporin_N
Motif
Other DBs
NCBI-GeneID:
28850202
NCBI-ProteinID:
XP_018139665
UniProt:
A0A179F9K4
LinkDB
All DBs
Position
7:complement(1511729..1516009)
Genome browser
AA seq
1353 aa
AA seq
DB search
MFNPSVGEGGPATATRSRRRQRPKSSDSLVQQPKAKRQRLPLTEQTFVNPDVQPEMVEAA
KADKIASLDPKQDSPSENFHPTPRKELNVRAKKSKHGDRAANKGDGSLVLTSTSAFTVSK
LPALPDRIRSDWSGSQQADIFSNPGYALSLTAAHAIVWAYNSTSQSPETFTFTLPSASKP
SDPLPVGCLVSPSASSTEPGLVVVMSGSGKVVFWESISSAATFAFIKKDRSGVEHVISGM
SSGEKVVGITNAESAGFVLTFNTGRLAYMSVRDSHGRPAISVQFLRTNLSPTSGGIFGSI
RHAFSHLSLRGDIAAVRADRSSRVGERNIVALTSKGKLQAWRIHRGGHNEPIGEADMRDR
LVSALQENDPFSKDFPAESFEALDCTYVPKGLESKYLELSRLSDAMATDNPLVQHLLLLV
CLTRRSVSRYALVEVILTPKDCQVGMIRPITSYSTAITASDPNQTIRPRVYLPRPALVAF
AVFDRAAVIASVAISPESPDSQLQSDNHILTPSFEDVVDFREDNIHEIVGSGFEELAPSS
GHEESRTMRTKIKNPAVVLMVRGAGVVRIVTTDVDKFASEQPPKVSAKSKLEQAVFFGAK
KDTPLNFDKRQDIKFTNEQMCEAALQVSHEILSSTTTYISTLPASVEDNLLARSNALQRL
MQYLNTIGADLDRKTRWNLLFNAEKMQVAAMLWKRHEVFTAARPAEDKKSIIGWIVEFIH
QDHKSNPIASIGEVDRVRHWFVNDVFRLELFVAFAYQVIKALYTEKLLDDIKLNVLLREA
VEINITAQAGAHEFRKRNLSFYGLGKEQLRMGILRDGYKGLPEPWTGCVHVATGIRRLSE
LCEQWLRKHEHLRDGPSEPNMPDPVIVGKIFDELPLLTDTMLTSVLECARWGMVNSTARA
TVEDFAKAYDTYRNDRPIALGRAGKWDQAAAIADKHGCLNALAVILLEHMEVLEGSLEDT
SLSAAETQSLKNLKQAKKTELEDSFARYGEPFAFPVYEYLLDKHGVESVLEFDLDTLGFK
TKFLRSRPELARISWINDVQQEKDVDHAASTLVDLALQNEDQVWKKKIELSLGKLALLAE
AEAESKEPSSFTVKSDDARRDERLRRVDNELIVVRIQDQLYSQIAPCTRTAVDKAAALSF
AIDGHSTNIPRRQKALLQLFSDGMEKLLDHQALHPMYLIDMLTLVSLKPEARDEIADPFW
LALKVANNSCHSDEIKQAKRLIWRRLFIRDDWAKINDTQLKDDREVVERLAETELFAMLT
DCIRYQDPRDPFRPMQPQEALGAFTDHLDRRFQGFADNEQSKLIDAMNWEDKLLNQYMEK
NRLADWVRATFEAAQIEVANAADEVTRTGASVE
NT seq
4062 nt
NT seq
+upstream
nt +downstream
nt
atgttcaatccctcggtcggagagggcggtccggccaccgcgacaagatctcgccgtcgt
cagaggcccaagagctctgacagcctcgttcagcaaccaaaggctaagcgccaacgcctg
cctctcaccgagcaaacttttgtcaaccccgatgtacaaccagaaatggtcgaggccgcc
aaggcagataagatcgcgtccttggaccctaagcaggattccccttcagagaattttcat
ccaacgcctcgtaaagaattgaacgtgcgagcaaaaaaatcaaaacatggagatcgtgcc
gccaataagggcgatggtagtctcgtactgacgagcacgagcgcattcaccgtttcgaaa
ttacctgccttgccagacagaatacggtccgactggtcaggcagccaacaggccgatata
ttctccaaccctggatacgctctgagcctgacagcagcacatgccatcgtttgggcttac
aactcgacttcacaatctcccgaaaccttcacattcaccctgccgtctgcatcaaaacca
agcgatccgctacccgtaggatgtcttgtctcaccctcggcgtcatccacagaaccaggt
cttgtcgttgtcatgtctgggagtggcaaagtcgtcttttgggaatcgatatccagcgct
gccacttttgccttcatcaagaaggaccgctctggagtcgaacatgtgatttctggaatg
tcttcaggggaaaaggtcgttggcattaccaatgctgaatctgcaggttttgtgttgacc
tttaacacgggaagactggcgtacatgagcgttcgagacagccacggacggccagcgatc
tcggtacaattcctaagaacaaatctttcaccgacttctggaggtatctttggaagcatt
cgtcacgcattttcccatttgtctcttcgaggcgacatcgccgcggtcagagccgacaga
tcgtcgcgcgttggagaacgaaatattgtcgcgttaactagcaaaggtaaactgcaagct
tggagaattcatcgaggcggccataatgaaccaattggcgaagcggacatgcgggatcga
ctggtatccgcgcttcaggaaaacgaccccttcagcaaagatttcccggccgaatctttc
gaagccttggactgtacctatgttcccaagggtctcgagtccaaatatttggagctcagc
agattaagcgatgcaatggcaaccgataaccctttggtacaacacctattgctgctggtg
tgtctgactcgacgaagtgtctccaggtatgcactggtggaggtgattttgacccccaag
gactgccaggtgggaatgatacgtccaattacctcgtattcaaccgccatcaccgcctcg
gatccgaatcaaaccatcagaccccgtgtgtacctgcctcgacctgctctggtagccttt
gctgttttcgaccgcgctgccgtaattgcgtccgtcgccatttcccccgaatcgccagac
tcacaattacaatcggacaatcacatcctgacgccttcctttgaggacgtggttgacttt
cgggaagataacatccacgaaattgttgggtcaggctttgaagaactagcgccgtcctct
ggccatgaagagagccgcaccatgcgtaccaagatcaaaaatcctgctgtggtgctgatg
gtgcgcggcgctggcgttgtacgcattgtcacgactgatgtagacaagtttgcgagcgaa
caaccccccaaagtatcagctaaaagcaagttagagcaagccgtgttctttggagccaag
aaggacactcccctcaactttgacaagcgacaggatatcaagtttaccaatgagcagatg
tgcgaggccgcccttcaagttagccatgagattctcagctccaccaccacgtatatatca
acacttccagcatctgtagaggacaatcttttggcccgttccaatgccctgcagagactc
atgcaatacctcaatactattggcgctgacctagatcgcaagacgcggtggaatctgctt
tttaatgcagaaaagatgcaggttgccgccatgctgtggaaacgccacgaggtctttact
gccgctcgaccggccgaagacaagaagagcatcattgggtggatcgtcgaattcattcac
caggaccacaagagtaaccccatcgccagcattggagaggtcgatcgtgtgcgccattgg
tttgtcaatgacgttttccgacttgaactattcgttgcttttgcatatcaagttatcaaa
gccctctacaccgagaagctgctggatgacatcaagctcaatgttctacttcgcgaagct
gtggaaatcaacattaccgcacaggccggggcacacgagtttcgcaagagaaatctctcc
ttttacggacttggaaaggagcaactgcgcatgggcatcctgcgagatggctacaaagga
ttaccggaaccttggaccggctgcgtacacgtggcgactggtattaggcgactctcagaa
ttgtgtgagcaatggctcaggaagcatgagcacttacgagatggcccaagcgagcccaac
atgccggaccctgtcattgtgggcaagatttttgacgaattgccactgttgacagacacg
atgctcacgtctgtcttagagtgtgcgaggtggggaatggtcaactctaccgccagagca
acggttgaagactttgccaaggcatacgacacctacagaaatgataggccaattgccctt
ggccgagccggcaaatgggaccaggctgcagcgattgctgacaagcacgggtgtctcaac
gccttagccgtgatcctgcttgagcacatggaagttttggagggcagcttggaagacaca
tcgctatctgctgcagaaacccagagcctgaagaacctgaagcaagccaagaagactgag
ctggaggatagctttgccaggtacggcgagccttttgccttccccgtctacgagtacctg
cttgacaagcatggcgtcgaatcggtcttggagttcgatctcgacacccttggcttcaaa
acgaaattcctccggagccggccggaacttgctcgaatttcctggatcaacgatgttcaa
caagaaaaggacgtcgatcacgctgccagtaccctggttgacctagctctccaaaatgaa
gaccaagtgtggaagaagaagattgagctcagtctcggtaaactcgcactcttggctgaa
gccgaggccgagtctaaggagcctagctcattcacagtcaagtctgacgatgcgcgtcgc
gacgagcgcctccgccgagttgacaatgagcttattgttgtacgaatccaggatcagctc
tacagccaaatcgctccgtgcactcgaaccgccgtcgataaagctgccgccctatcattt
gctatcgatggccatagcaccaacatccctcgacgacaaaaggcacttcttcaattgttc
tccgatggaatggagaagctcctcgaccaccaagcactccaccccatgtatctcattgac
atgctgaccctcgtatctctgaaacctgaggctagggatgagattgcggatccgttttgg
ttggccctcaaagttgcgaataacagttgccactctgacgaaatcaaacaagccaagaga
cttatctggaggaggctcttcatccgagacgactgggctaaaatcaatgacactcaactc
aaggacgatcgagaggttgttgagcgacttgctgagacggaattgtttgctatgctaacg
gactgcatccggtaccaggaccctcgcgatcccttccggccaatgcagccccaagaagcc
ctgggtgcctttacggatcatttagaccgccgtttccagggattcgccgacaacgagcag
tccaaattgatcgatgccatgaattgggaggataagcttctcaatcagtacatggaaaag
aaccgtcttgcagactgggttcgagcaacattcgaagccgctcagattgaggttgccaac
gcagccgacgaagtcacacggactggcgcttctgtcgagtag
DBGET
integrated database retrieval system