Pochonia chlamydosporia: VFPPC_07624
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Entry
VFPPC_07624 CDS
T09407
Name
(RefSeq) tho2 protein
KO
K12879
THO complex subunit 2
Organism
pchm
Pochonia chlamydosporia
Pathway
pchm03013
Nucleocytoplasmic transport
pchm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pchm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
VFPPC_07624
09122 Translation
03013 Nucleocytoplasmic transport
VFPPC_07624
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pchm03019
]
VFPPC_07624
03041 Spliceosome [BR:
pchm03041
]
VFPPC_07624
Messenger RNA biogenesis [BR:
pchm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
VFPPC_07624
Spliceosome [BR:
pchm03041
]
Complex C
Other components
EJC/TREX
VFPPC_07624
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
VFPPC_07624
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
THOC2_N
Tho2
Thoc2
Motif
Other DBs
NCBI-GeneID:
28850446
NCBI-ProteinID:
XP_022284364
UniProt:
A0A179FK68
LinkDB
All DBs
Position
4:complement(<669442..>676769)
Genome browser
AA seq
2384 aa
AA seq
DB search
MPPKRKRPDRPSGDGGRPSPHRPGDTNLAQHDGHDSSARGRGARGGHFSHGQRGGFNRRD
SSQGYGRGGNGQHHNQQNHSRNQGHAQPPSPAKQPPSSPSASRQPPTGSSQSQPSTQISS
PLMTKPSSEPTQRPVSPVRSNYRYENLTDDKVQTWDERGRQEIIQQGVQARDDVDITELS
TLFQEFIQAVVEQRLPASDAGACIKEILGDENSDIVKDAYAFAPHTLFLDSLAIIMDNDS
GLYRPTLREFLIATQVSPALMRQILDAPILQQLGLIRDNFARLGVRQATNLLYRQANYNL
LREETEGYSKLITELFSTNTVTPPPPELAEQTFERVKGLIGTFDLDVGRVLDVTLDVAAA
VLIKQYKFFVKFLRVSSWWPRAHFKYDTIYNGGLPPWADPAYLQWTATEQDEERITQQKT
ARDVAFWDRAREVHLGAFFELGGRQVSEADLEQANITNGRETKQEADFEQQWMEETKTLP
PPGNRVAAQLLGFKLLFYNSEMRDKSDVLPANLLYLAALLIKIGFLSLTDLYPHLSPPDD
NMEKIREAETEKLEQEERAARGGGRMNALLMAGVLPQGDDDNPNATSVPKREAPKKADAD
TKQTTKEESEAKNKLPEPLEQKVSLLTQLLTIGAIPESLFILGRFPWIPEVFPDILQRIH
RILHVSLEKVYNDARPTTTSLMDCPIKQLPDIDQSGMPKGSVRLHTPPPKKQWRWPYPEK
FDVNENQNYRFYWDEWADNIPVCQTVDDVFTLCNTFLNLSGVNIGKDEALLSKLASIGSK
SLADDASAANLARWHDLLRRLMLPALSHTKANASVVNAIWDLLRHYPLTTRYSMYAEWFE
GQISRLPAMKSAFARATADTRGTMKRVSLTNLSEMAKQLAKTSYSSPGIVFRVAFEQLES
YPNLIEAFVECAKYFTDLSYDVLIWSLLNSLGKSRSRTQAEHALTTSKWLQALSRFSGKV
FRRYQVLSPTPVLQYVNDQLFRGNSTDLIILKEFISSMGGIVDSVDFTDYQVLSMAGGAW
LRRYTLIRAQDRRFDNIKSSKRFMQALVDSKLAAQLLLNLAQYRQAAIFKVPDDEAHIKF
LSSVVDDSHQTLIQYLDLLWSNLDSSTFDAIVPSISELISTYGLDTSLAFLIGRTSLGHR
IFPWKGGKNKKKEPNAKPITDKEGDVDMPAQGEEPKDPESQEIGESEEQKSEDVSLTRTM
VNSLQPIIESVQSAVRPEVWQKISPELYATFWALQLGDICFPEEIYVRERQRIMSEWQTL
SSDRSDMSRKGIDRRTEKRKELMDLQGYLLDELSEHGLRKAKWKYFLTRQFQTSFPDAAA
KTDSVSDILLEQCLLPRVLLSPADAEYTFRFVKALHEWNAPVFKLMSLYDRLFNANRLRS
LIFTCTVREAEYLGRFLKLILEDLSRWHKNELIQGDKDDKAAKHAPKLGAYDKEGKGTPE
QPHFGFALTVNDEGKPETFVEHAQFRDLLFRWHKNLNMALKNCLGGSEWMHIRNGITVLK
TVLDFFPAVDFMATQFTTQLQNITKREAAAKTSPDSEEGGRVDLSVAAQGAMSELQRRKS
KWVMVQAFRQNAVAGSRQEASKASATLLRPTAPDFKPQVDRTPSAKHTTAEEEDGEVQDR
EAVRETSGAPEKELLPPKPAGSGRDSSKHSDTAGQSRSSTPKPGSFKNEPRAHKLPDRPS
HNLPSRPDVPIPGHFTPERFPQSRGHDRRDGREARGPRDGRENRDNRDTRDSRDAKDHRE
SRQSDSERPVRGRDFADRRSTDHKEENSRAELPPRPTQSERERTHREPRGSRAHDRPQEN
SVPDPAPASDAHEPAMNPERAALFAQDTPDRSSRGADMDRSSRGRRQGGGAVMDTINPER
AALISDRDDGTHNAPGRLNRDDGRERGGPRGQSPRRNTRHGNEQASSAPGARDEHQSHNL
QDQRPSGRQHRDRSPLPGNFRGDRPTDREGDRAHPDTLRDGSGFHRSGPRPQEPENRKPY
QDQNYGRLNPVPQPPNAEIPSGPRGRGRNASRGGHGQPSLPGRPDNRFGPPETPRAPSPE
RHGPPTGPSSGRNRRGYDSGGGPQTPAGTPAGPSGRNRNFNQTNDKPSPANLSGPSTSGV
HPDRLAQLGGPPSAPQGTQRHHNQAANTPDRPQPSSRSGPGPDAETPTGPAGGDRPGRGG
GRRQLAGINSTLQQAHAKMPEPPRSGGNRNNQPRQMLGNSDIQVLAGGSPTPTPSQERQD
TMWGSSNGGDNQGRRDHDRSRSDRENRSERSNRTSRRSSRERERDGKDPSQGRDRRSVGG
PDAGGSREERESRRQPRDSMGPPPPSSGRDNRHRGDGPPAGGNWGAEDWSGNRGGNGGGR
GAGPRDGSNQPGDRRDHREDRGRKRRSEEGVGNLTSEREKRPRR
NT seq
7155 nt
NT seq
+upstream
nt +downstream
nt
atgcccccgaaacgaaagcggcctgaccggccctctggcgatggaggcaggccgtctcct
catagacccggagatacaaatctggctcagcacgatggccatgatagctcagctagagga
cgtggagcgcggggaggacacttctcccacggccaacgcggtggctttaatcgccgggac
tcgtctcaaggatatgggcgaggagggaatggtcaacatcacaaccaacaaaaccactcg
cgaaaccaaggacatgcacaacctccctcgcctgccaaacagcccccgtcgtcaccatca
gcttctagacaacctcctactggttcctctcagtcgcagccttcgacgcagattagctcc
cccctaatgacgaagccatcttctgaacctacgcaacgaccagtgtctccggttcgatca
aattataggtacgagaatcttacggacgacaaagtacagacgtgggacgagcgcggtcgc
caagaaattatccaacaaggcgtacaagcccgagatgatgttgatatcactgagttgtcg
acgctctttcaagagtttatccaggccgtggttgagcaaaggctgcctgcgtccgatgcg
ggggcttgtatcaaggaaatcctaggcgacgaaaattcagatatcgttaaggacgcttat
gcatttgcgccgcatactcttttcctcgattctcttgctattattatggacaatgactct
ggtttataccggcccactctccgtgaattcttgatagccacacaggtctctccagccttg
atgcgccagatcttggatgctccaatcttgcagcaactgggcttgattcgagacaacttt
gctagactaggcgtccgtcaggctaccaatctcttatacagacaagcaaactacaacttg
ctccgtgaagaaacggaaggttactcgaaactcattacggaactcttttcgacgaacaca
gtgacaccgccgcctcccgagctagctgagcagacgttcgagagggtcaagggacttatc
ggtaccttcgacttggatgttggccgggtgcttgatgtcacccttgatgttgcagccgca
gtcttgataaagcaatacaaattcttcgtcaagtttttgagagtgagctcttggtggccg
cgagctcatttcaaatatgacacaatatataatggtgggctaccgccatgggcggaccct
gcctatttgcaatggactgccaccgaacaagatgaggaacggattacgcagcaaaagacg
gccagggatgtagccttctgggatcgtgctagggaggtacatctcggtgcctttttcgag
ctcggcggcaggcaagtgagcgaggcagatttggaacaagccaacatcaccaatggccgg
gaaacgaaacaagaggcggatttcgaacagcagtggatggaagaaacaaagacattgcct
ccgccgggaaatcgcgtcgctgcacaactactcgggttcaagctgctcttctacaactct
gaaatgcgcgacaagtccgacgtcctaccggcgaacctgctgtacttggctgctctgctg
attaaaattgggtttctctctcttactgatctctacccgcacctatctcctccggacgac
aatatggagaaaatccgcgaggctgaaacagagaaattggagcaggaggaacgagcagcc
cgcggtggaggaaggatgaatgcgctcttgatggccggtgttctccctcaaggcgacgac
gacaacccgaacgcaacaagtgtacccaaacgggaagctccaaagaaagctgatgcggac
acaaagcaaacgaccaaggaagagtctgaagctaagaacaagctaccagaacctttggag
cagaaagtatcactgttgacccaactgctcacaattggcgccatccctgaatcattgttc
attcttgggagatttccttggattccagaagtttttcctgatatcctccaaagaatacat
cgcatccttcatgtcagcttggagaaggtttacaacgatgctcggccgacaacaacgtct
ttaatggactgccccatcaaacaactcccggatattgatcaatcaggaatgccaaagggc
agtgtgagactccacacaccaccaccaaagaagcaatggcgttggccttacccagagaag
ttcgatgtcaacgagaatcaaaactatcgcttctattgggacgaatgggcagacaacatc
ccggtgtgccagactgtggatgatgtgttcacattgtgtaataccttcttgaatttgtcc
ggtgtcaatattggcaaggatgaagccctcttatcgaaactggccagtatcggcagtaag
agcctcgcggatgacgcttcagcagcaaatcttgcccgatggcatgacctcctgcgacga
ctaatgctgccagccttgagtcataccaaagctaatgcgtctgtggtcaacgccatttgg
gatcttctgagacattaccccttgacgacacgctattccatgtacgccgagtggttcgaa
ggtcaaatttccagactacccgccatgaagtctgcctttgcccgtgccaccgctgacact
cgaggcacgatgaagcgcgtttctctgaccaatctcagtgaaatggccaagcaacttgcc
aaaacgagctactcatctcctggcattgttttccgcgtcgcttttgagcaactggaatca
tatccaaatttgatcgaggcattcgtcgagtgtgccaaatactttacagatctgtcatat
gatgtgctcatctggtctttattgaactcattgggcaaatcacgaagtcgaacacaagcc
gagcatgccttgacgaccagtaaatggttgcaggccttgtcgagattttccggcaaggtt
tttcgccgctatcaagttcttagcccaacccctgtgctgcaatatgtcaacgaccagctc
tttcggggcaattctaccgatctcattattctcaaagaatttatttcgtcaatgggcggt
atcgtggattcggtggacttcactgactaccaggtgctgtccatggccggtggcgcatgg
ctcagaagatataccctcattcgggcccaagatcgacgttttgacaacatcaagagctca
aagcgcttcatgcaagctcttgtagattccaaattggcagctcagcttctcctgaatcta
gcacaatatcgacaggctgcgatattcaaagtgccagacgatgaggcacatatcaagttt
ctctcttccgttgtcgatgactcccaccaaaccttgattcaatatctcgatcttctgtgg
agtaacctggattctagcacgtttgatgctattgttccgtccatctctgaactgataagc
acatacggtctagacaccagtttggcttttctgattggcagaaccagcctcggacatcga
attttcccttggaaaggaggcaaaaacaaaaagaaagaacctaatgcaaaacccatcact
gacaaagagggtgacgttgatatgcctgctcagggcgaagaaccaaaagacccagaatct
caagagattggagagagcgaggagcaaaaatccgaagatgtgtcgcttactcgcacaatg
gtcaacagcctccagccaattatcgaatcggttcaatcagctgttcgacctgaagtttgg
cagaagattagcccagagctctatgctacattctgggcgttgcaattgggagatatttgc
tttccagaagaaatctacgttcgtgaacgccagcgaattatgagtgaatggcagacgctt
tcaagtgaccgatcagatatgagcaggaaaggcattgacaggaggaccgagaaacggaag
gagctcatggacttgcagggatatctccttgacgagcttagcgagcatgggcttcgcaaa
gccaagtggaagtatttcttgacaaggcagtttcagacatccttcccagacgcagctgcg
aagactgacagtgtctccgacatccttttagagcaatgtcttcttccccgtgttctgctt
tcacctgccgatgcagaatacacattccgcttcgtcaaagctcttcatgaatggaatgct
cccgtcttcaaactcatgtcactatacgatcgacttttcaacgccaaccgactcagatcg
ctcatttttacctgcactgtgagagaagctgaatacttgggtcgcttcttgaagctcatt
ttggaagacttgtcccgatggcataagaacgagctgatacagggcgacaaggacgacaag
gctgcaaaacatgccccaaaacttggagcgtacgacaaggaggggaagggaactcctgag
cagcctcactttggatttgctctcactgtcaacgacgagggcaaacctgaaacttttgtg
gaacacgcacaattcagagatcttttgtttagatggcacaagaacttgaacatggcactt
aaaaactgcctgggaggctctgaatggatgcatatccgaaacggtattactgttctcaaa
accgttctagacttcttcccggcagtagatttcatggcaactcaattcaccacacagcta
cagaacatcacgaaacgggaagccgctgcaaagacttcgcctgatagcgaagagggtggt
cgcgtcgacctctcagtagcggctcagggtgccatgtccgagctacaacgacggaaatca
aaatgggtcatggtgcaggctttccgacagaacgcagttgccggatctcgacaagaggct
agtaaggcatccgccactttgctaaggccaaccgcccctgatttcaaaccgcaggtcgat
aggacacccagcgctaagcatacgactgcggaagaggaagatggagaggtccaagacagg
gaagccgttcgcgaaacgagtggtgcccctgagaaggagctgttgcctcctaaacccgct
ggtagtggccgagattcctcaaaacacagtgacacagctgggcaatctaggtcatcgacg
ccaaaacccgggagtttcaagaatgaaccccgagcccataaactgccggatcggccatcc
cacaacttgcccagtcggcctgacgttcccatacctggacacttcacacccgaacgcttc
cctcagtcgcggggtcacgatcgtcgggacggtcgagaagctcgcggccctcgggatgga
cgggaaaatagggataatagggacacgagagattcccgcgacgccaaggaccatagagag
tcgcgacaatctgattctgaacgtcctgtacgcggtcgcgactttgcagatcgtcgctct
actgaccacaaagaggagaatagccgagcagagctgccaccccgaccaacgcagtcagag
cgcgaacgcacacatcgtgaaccacgaggtagcagggctcatgatcgtccccaagaaaac
tcagtccctgaccccgctccagcgagcgacgcacatgagcctgcgatgaatcctgaaaga
gcagcactctttgctcaagataccccagacagatcgtcccgtggagcggacatggaccgg
tcatcccggggccgtcgacagggtggtggtgcagttatggacaccatcaatccggaacga
gctgctcttattagcgatagagatgacggcacgcataatgctcctggaaggctcaacaga
gacgacggtcgcgaaagaggcggcccgcgcgggcagtccccacggcgcaacactcggcat
ggcaatgagcaggcttcctctgcccctggtgctcgtgacgagcatcagagccataatctt
caagaccaacgtcccagtgggcgccaacatcgggaccgatcccctttgccaggaaacttc
agaggagatcggccgacagatcgagaaggagacagagctcatcccgatactcttcgtgac
ggctctggctttcaccgatcagggccccgcccacaggagcccgaaaatcggaaaccttat
caggaccagaactatggacgtctcaatcccgtaccgcaaccccctaacgccgagattccg
tccggtccacggggcagaggtagaaacgcaagccgtggtggacatggacagccttctctg
ccaggtcgacctgacaaccggtttggaccaccagaaactccacgggcgccgtcacctgaa
agacatggcccgcctactggtccgtcgtcaggtcgaaaccgacggggttatgactctggc
ggtggaccacaaaccccagctggtactccggcgggaccatcaggtcgaaataggaatttc
aaccagactaacgacaagccgtcaccagcgaatctaagcggaccgtcgacgtctggcgta
cacccagaccggctggcccagcttggcggtcctccttccgcacctcaagggactcagcgc
catcacaaccaggcagcaaatacccctgatcgaccacagcccagctcaagaagcggacct
ggacccgatgcagaaacaccaacgggccctgccggaggtgatcgtcccggccggggtggt
ggtagaaggcagctcgcaggaattaacagtactctccaacaagcccatgcaaagatgcca
gaaccaccacgtagcgggggaaatcgtaacaatcagccacgacaaatgttgggcaattct
gacattcaggttcttgcgggtggttcgccaacacccacccccagccaagaacgtcaagac
acaatgtgggggtcttccaatggaggtgacaaccaagggcgtcgagaccatgaccgttcc
cgaagcgatcgtgagaatcgatccgaaagatctaatcgcacatcacgccgaagtagccgc
gaacgcgagcgagatggcaaagatcccagccaaggtcgagacaggcgatcggtgggcggc
ccggacgcaggtggaagtagggaagagcgcgaatcccgtcgtcagccgagggactccatg
ggccctcctccgcccagcagtgggcgagacaaccgacacagaggagatggcccgcctgcg
ggaggcaattggggagcagaggactggagtggtaacagaggtggaaacggcggcggccga
ggagcaggcccacgggatgggtcgaaccagcctggagataggagagatcatcgtgaagac
cgtggacgaaagagacgaagtgaagaaggtgtgggcaacttgacgagtgaacgcgaaaag
cgacctcgacgatag
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integrated database retrieval system
