Pochonia chlamydosporia: VFPPC_07659
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Entry
VFPPC_07659 CDS
T09407
Name
(RefSeq) ABC transporter
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
pchm
Pochonia chlamydosporia
Pathway
pchm02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pchm00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VFPPC_07659
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pchm02000
]
VFPPC_07659
Transporters [BR:
pchm02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
VFPPC_07659
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
ABC2_membrane_3
SMC_N
AAA_29
AAA_23
RsgA_GTPase
R1_ABCA1
Motif
Other DBs
NCBI-GeneID:
28850475
NCBI-ProteinID:
XP_018143131
UniProt:
A0A179FKG0
LinkDB
All DBs
Position
4:785375..790144
Genome browser
AA seq
1589 aa
AA seq
DB search
MDLLRQTNTLTKKTLRIILLRHFTSTIYSAFVLPVIASLYLGLGQKFNNPNNKFGIGTPQ
DIFSLGDALAKAQGGRDTVAFVNTGHSGGEIDRVIVSLSKTVTDAGKNATKISNEDDLGY
VCKSTIRGTSNCYGAVVFYSSPNEGSGGIWNYTLRADAGLGLYFRNDHDDNDPEVYTLPL
QHAVDAAIAGDSFPSRVQQYPYTQQTEEEREAQVLREYQKTFINYLSVAFVIALIGVCYH
MPGVIATERETGISQLIDAMMPATRGWHRQFVRLVSHQNAFIMTYLPGWIIASLVCRALI
WKNTSVGIMIIFFILSGFAITSMSLLGACLWRKAQMSGVVTAVVWIALGIVAQAVPNPGT
ATVAILGLLFTPCNFVYFITYIARYEQDGQGANLAKAHKDSPWKLPGIILWVFLILQFLA
YPFIAAFLERTLHGVTTGVRSASSPEKATAQNGDVIRVENMTKIYRPGLLRRFFSFVSPP
RPKVVAVDNLTLTAKRGQILALLGANGSGKSTTLDIIAGISNFTTGNVSIDARGGLGIAP
QKNVLWDDLTVEEHIKIFNQLKSPHKYASNEETAALIKAIGLAPKTKAMSKTLSGGQKRK
LQLGMMLTGGSAVCCVDEVSSGIDPLSRRKIWDILLSERGNRTIVMTTHFLDEADLLADN
IAILSKGKLRAEGSSAQLKDSFGAGYRVHVLNARHMKHAPEVPGVQRKELSNTITYVAPS
SRLAAEVIRTLEQARIPYQFSGPTIEDVFLNLADEVRENEELNKKHEEARQLPTKERSSD
SEDAVKHAGATHQGLLPGRPINWASQILVFLRKRLTVLKTNWVPYAIAFLVPIVAAAITQ
MLVKGKGPVGCSPRDSGSRADFDDLTKFYKSASLVGGPSSKFNASVAKDLTKSIVPGSVD
VGNFSFKLVDSLSEMQSYIESNRLKVSPGGWWLGDSGSVPTIAWRADNFSMYTSFLTQNL
MNTMLANLTIGARYTHFDSPIAPGTLDALQLVIYFCIGCSIFPGLFGLYPNYEKRQQIRG
LQYSSGARTIPVWAAHLLFDFAIILVSMALVTIIFATTSDIWYHPGYLFPVFMLYGMVAI
LWSYFFSLVCKSALATYAATAVLQGLGFAVYMISFLFILTFSSAASLDKSILISHWVIAI
IFPTGSLIRAFFIALNTFSTTCDGDKLQSYPGAMVAYGGPILYLAVQAILLFGLVLWLEV
GTGKYATGHAKTTVEVDDPEIANELVRVDNAGQDAEGLRVSHLTKAFKKNTVVDNVTFGI
DHGEVFALLGPNGAGKSTTISLIRGDLHPSRNGGDVFVEKASVIKNRALARQNLGVCPQF
DAIDSMTVEEHLQHYARIRGISNVDEQVDAVIRAVGLGVYTKVMAHTLSGGNKRKLSLAI
ALTGNPSVILLDEPSSGLDAAAKRVMWRTLETIVPGRSILLTTHSMEEADALANRAGIMA
KRMLALGNTDTLRHRFGDTLHVHLVSKTAPHSTPEEMDYIRGWIAQTFSNAEIEQETYHG
QMRYSIPCSVMPHVKSSEKGGSSTPGSAIGQLLVMLEENKEALGIAHYSVTPTTLNEVFL
NIVGQHDILEEGYKEEKKPWYKKRISDWF
NT seq
4770 nt
NT seq
+upstream
nt +downstream
nt
atggatctattgcgccaaacaaatactctcaccaaaaagacgctcagaattatcctcctt
cgtcacttcacaagtaccatctacagcgccttcgttctccctgtcatcgcatcgctctat
ctcggtctcggtcaaaaattcaataaccccaataacaaattcggtattggaacccctcag
gacatattttcccttggcgatgccctggccaaagcccaaggcggtcgcgataccgttgcc
tttgtaaacacaggccattctggaggggaaattgatcgcgtcattgtctccctcagcaag
actgttacagacgcaggaaagaacgcgaccaagatttccaacgaagacgatcttggctat
gtttgcaagagcactatccgtggtacatccaattgctatggcgccgttgtgttttactcg
tctcccaatgagggcagcggcggcatctggaactatacccttcgtgccgatgctggtttg
ggactctactttaggaacgaccacgatgacaacgacccagaagtctatacgcttcctctg
cagcacgccgttgatgcggccattgctggcgactcgtttccatccagggtgcaacaatac
ccctacactcagcagacggaggaagagcgagaagcacaggtgttgcgtgagtatcagaag
acgtttatcaactacctcagtgtcgcgtttgtcattgccctcatcggcgtctgctaccac
atgccgggagtgattgccactgagcgagagacgggtatttcgcaactcatcgacgccatg
atgcccgccacccgtggttggcatcgacagtttgttcgacttgtctctcaccagaatgca
ttcatcatgacgtatctacctggttggataattgcatcccttgtctgtcgtgctcttata
tggaagaataccagcgtcggaatcatgatcatcttcttcatcctcagtggattcgccatc
acatccatgtctctccttggagcctgtctatggagaaaagcccagatgtctggcgtcgtc
accgcagtggtatggatcgcattgggtatcgtcgcgcaagctgttccaaatccaggaaca
gccacagtcgccattctcggcttgttgtttactccctgcaactttgtctacttcatcacc
tacatcgcgagatatgagcaggacggccagggcgccaatttggccaaagcacacaaagac
agtccctggaaacttcccggcataattctatgggtgttccttattttgcaattcctcgcc
tatccctttatcgccgcgtttttggaacgcacattgcatggtgtcacgactggcgttcgc
agtgcatcgtcgcccgagaaggccactgctcaaaacggggacgtcattcgcgtcgagaac
atgaccaagatctaccgcccgggcttgttgcgtcgattcttctcctttgtttccccgcca
cgacccaaggtcgttgccgtcgataatcttaccttgactgcgaaaaggggccagatcttg
gctttgctcggtgcaaatggtagcggcaagagcacaactctggatatcatcgctggtatt
agcaatttcaccaccggcaatgtttccatcgacgctaggggtggccttggaattgcgccg
caaaagaacgtgctctgggatgacctcacagtcgaagaacacatcaagatctttaatcag
ctcaagtctcctcacaagtatgccagcaatgaagagacggcagctctgattaaagccatt
ggtctggccccaaagacaaaggccatgtctaaaactctttcaggcggacagaagcgcaaa
ctacagttgggaatgatgttgactggcggcagtgccgtgtgctgtgttgacgaagtttca
tccggtatcgatccgctctccagaagaaagatttgggacattctcctgtcggagagagga
aataggaccatcgttatgactactcatttcttggacgaggctgatttgctcgccgataat
attgctattctgtccaaggggaagcttcgagctgaaggctcgtccgcgcagctcaaagac
agctttggcgccggatatcgggtccatgttctcaatgcaagacacatgaaacacgctcct
gaagtacctggggtgcaacgcaaggaactatccaacaccatcacctacgtggcgccttca
tctagacttgctgcagaggtcattcgcactttggaacaagcccggattccgtatcaattc
tctggccccacaatcgaggacgtcttcttgaatctagccgacgaggtgagagagaacgaa
gaattgaataaaaagcacgaggaggctcgccagcttcccaccaaggagaggtcatcggac
tctgaagatgccgtcaaacacgccggagccactcatcagggcctcctacctggccggccc
atcaactgggcaagtcaaatcttagtcttccttcgcaagcgtctcacagttctcaagaca
aactgggttccctatgccatcgcgttccttgtccctattgttgccgccgccataacacaa
atgcttgtcaagggcaagggccccgtgggatgcagtcccagggattcggggtccagagca
gatttcgatgacttgaccaagttttacaaatccgcaagcttagtcgggggaccgtcatcc
aagttcaacgccagtgtagcgaaagacctcaccaagtccattgttccaggttctgtcgat
gttggcaacttctccttcaaattggtcgactccctctcggaaatgcagtcgtacattgag
agcaaccgacttaaggtatcacctggtggatggtggctgggagattccggatccgttccc
actatcgcctggagagccgataacttttccatgtatacgtcctttttgacgcagaacctt
atgaacacgatgctcgcaaatttgaccattggggctcgatatacacactttgactctccc
attgccccgggtactctcgacgctcttcagctggtcatctacttttgcatcggttgctcc
atcttcccaggactgtttgggctttatccaaattatgagaaacgccaacagattcgtggc
cttcagtactcgagtggagcgagaacgattccggtttgggcggcacatttgctctttgac
tttgccatcattctggtttcgatggctctcgtcaccatcatatttgccacaacttcagat
atttggtaccacccaggatacctgttccctgtattcatgctctatggtatggtggcaatt
ctctggtcatatttcttctcgttggtgtgcaagagtgcgctggcgacatacgcggcaact
gctgttcttcagggtctcggattcgccgtgtacatgatctcgttcctctttattcttacg
ttctcgtcggctgcgtctcttgacaagagtatcctcatctctcactgggtcatcgcgatc
atcttccctaccggttcccttattcgagcgttctttatcgctctcaatacattctccact
acctgtgatggagataagctgcagagctatccaggagctatggttgcctacggcgggcca
atcttgtatcttgccgtacaagccatactcttattcgggttggttctttggctggaggtc
ggtactggcaagtatgctacaggacatgccaagaccaccgtcgaggtcgacgatcccgag
attgcaaacgagctggtccgtgttgacaacgccggacaagatgctgagggtcttcgggtc
tcacatctgacaaaggcattcaagaagaatactgttgtggataatgtcacttttggtatt
gaccacggtgaagtcttcgccttgcttgggcccaacggcgctggcaaatctacaaccatc
tctctaattcgcggcgacttacatcctagccgtaatggtggcgatgtatttgtcgagaag
gcctccgtcatcaagaaccgagcacttgcacgacaaaatctcggcgtctgcccgcaattc
gatgccattgattccatgactgtggaggaacacctgcagcattatgctcgcattcgagga
atttccaacgtcgacgaacaagttgatgccgtgattcgcgcagttggactcggcgtatac
accaaggtcatggctcacactctatctggaggtaacaagcggaaactatctcttgccatt
gctctaaccggcaacccatccgttattcttctagatgagccctcatcaggactcgacgcc
gccgcaaaacgagtcatgtggcgaaccctggaaaccattgtccccggccgatccatcctc
ctgacaacacatagcatggaagaagctgacgcgcttgccaaccgagctggcatcatggcc
aaacggatgcttgctcttggaaataccgacactctgcgacaccggttcggcgatacactt
cacgttcatctcgtcagcaagaccgcaccacactccacccccgaagaaatggactacatc
aggggatggattgcgcagacattctcgaacgcagaaattgaacaggagacataccacgga
cagatgcggtactccattccctgctctgtaatgccgcatgtcaaatcttccgaaaagggc
ggcagttcaacaccaggcagtgccattggacagctgctggttatgctggaggagaacaag
gaggccttgggcatcgcccattacagcgtcactcccactacgcttaatgaagtcttcttg
aatattgtgggtcaacatgatatcttggaggagggttataaggaggagaagaagccttgg
tacaagaagcgtatctcggactggttctag
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integrated database retrieval system