KEGG   Pochonia chlamydosporia: VFPPC_07760
Entry
VFPPC_07760       CDS       T09407                                 
Name
(RefSeq) ATP-dependent RNA helicase DHH1
  KO
K12614  ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7]
Organism
pchm  Pochonia chlamydosporia
Pathway
pchm03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pchm00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    VFPPC_07760
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pchm03019]
    VFPPC_07760
   03036 Chromosome and associated proteins [BR:pchm03036]
    VFPPC_07760
Enzymes [BR:pchm01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     VFPPC_07760
Messenger RNA biogenesis [BR:pchm03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     VFPPC_07760
  mRNA degradation factors
   5'-3' decay
    Decapping complex
     VFPPC_07760
Chromosome and associated proteins [BR:pchm03036]
 Eukaryotic type
  Gene silencing
   piRNA pathway
    VFPPC_07760
SSDB
Motif
Pfam: DEAD Helicase_C ResIII NA-iREase2 CMS1
Other DBs
NCBI-GeneID: 28850564
NCBI-ProteinID: XP_018143255
UniProt: A0A179FLE7
LinkDB
Position
4:complement(<1132704..>1134457)
AA seq 504 aa
MTDQLVDQLRSTQLSDGIPAQNDDWKKNLKLPAKDSRQQTEDVTKTKGLEFENFALKRDL
LMGIFEAGFEKPSPIQEEAIPVALTGRDILARAKNGTGKTAAFVIPALERINPKVSKIQC
LILVPTRELAMQTSQVCKTLGKHLGINVMVTTGGTGLRDDILRLQDPVHIVVGTPGRILD
LAGKSVADLSECPMFIMDEADKLLSIEFTPVIEQLLQFHPKDRQVMLFSATFPLSVKDFS
DKNMVSPYEINLMDELTLRGITQYYAFVEEKQKVHCLNTLFSKLQINQSIIFCNSTNRVE
LLAKKITELGYSCFYSHARMQQQARNRVFHDFRNGVCRNLVCSDLLTRGIDIQAVNVVIN
FDFPKNAETYLHRIGRSGRYGHLGLAINLINWDDRFNLYNIERDLGTEIQPIPPSIDKSL
YVYENPDSIPRPISNLPRNNQQSQPAQPQQPMAHQPQGNWQSQNGHQNHHYGRGRGRGRG
FRGRGAAGGGGGGRGRGQPREAQS
NT seq 1515 nt   +upstreamnt  +downstreamnt
atgaccgatcagctggtagatcagctgcgaagcacacaactcagcgatggcattcctgca
cagaatgatgattggaagaagaacctgaaattgcctgccaaggatagcagacaacaaaca
gaggatgttaccaagacgaaaggcctggaattcgaaaactttgcgttgaagcgagacctc
ctcatgggtattttcgaagctggtttcgagaagccctcccccatccaagaagaagccatt
cccgtagccttgaccggccgggacattctggccagagcgaagaatggtactggcaaaacc
gccgcgttcgttattcccgccttggaacgcatcaaccccaaggtctccaagattcaatgt
cttatcctcgttcctactcgtgagcttgccatgcaaacgtcacaggtttgcaagacgctc
ggtaagcatctggggatcaacgtcatggtcaccaccggcggtaccggtttgcgtgatgac
atcctgcgtctgcaggaccctgtccatattgtcgttggaactcccgggcgtatactggat
ctggcaggaaagagtgttgccgatctcagcgaatgccccatgttcatcatggacgaggcc
gacaagcttctgtccattgagttcactcccgtcatcgagcagctcctgcagttccacccc
aaggaccgccaggtgatgctcttctccgccaccttccccctctctgtcaaggacttctct
gataagaacatggtctccccttacgaaatcaacctcatggacgaactcaccctccgcggc
atcactcagtactacgcctttgtcgaagagaagcagaaggttcactgcctgaacacactc
ttctccaagcttcagattaatcagtccatcatcttttgcaactcgacaaaccgtgttgag
ctactcgccaagaaaattaccgaactgggctactcttgcttctacagtcatgctagaatg
cagcagcaagcgcgtaaccgcgtcttccacgacttccgcaacggcgtttgccgaaacctc
gtctgctcagatcttctcacccgtggtatcgatattcaggctgtgaatgtcgtcatcaac
tttgattttcccaagaacgccgaaacctacctccaccgaatcggtcgatccggccgttat
ggtcaccttggtttggctattaacctgatcaattgggatgaccgcttcaacctttacaat
atcgagagagatttgggtactgaaattcagcccattcctcccagcattgacaagagcctt
tacgtttacgagaaccccgattcaatccctcggcccatttccaaccttcccagaaacaat
cagcaatcccagccagctcagcctcaacagcccatggctcatcagccacagggcaactgg
caaagccaaaatggccaccaaaaccaccactatggtcgtgggcgtggacgaggacgtggt
ttccgaggacgaggtgctgctggcggcggtggcggcggtcgaggccgtggccagccacgt
gaagctcaatcatga

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