Pochonia chlamydosporia: VFPPC_07919
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Entry
VFPPC_07919 CDS
T09407
Name
(RefSeq) SNF2 family helicase/ATPase
KO
K11665
chromatin-remodeling ATPase INO80 [EC:5.6.2.-]
Organism
pchm
Pochonia chlamydosporia
Pathway
pchm03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pchm00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
VFPPC_07919
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pchm03036
]
VFPPC_07919
Chromosome and associated proteins [BR:
pchm03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
VFPPC_07919
INO80 complex (yeast)
VFPPC_07919
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
DBINO
Helicase_C
ResIII
HDA2-3
Fe_hyd_lg_C
Motif
Other DBs
NCBI-GeneID:
28850700
NCBI-ProteinID:
XP_018143437
UniProt:
A0A179FM79
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All DBs
Position
4:1612927..1619462
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AA seq
1965 aa
AA seq
DB search
MDSNFRSTVLQRPQIGDGDGREQRDRDRDNHAPGQGNENGRGLVQTGLGPGPGPGPGHLD
DRHHPRDMDSNANVNAQTGAGSAMHRHMHSNTSLSMPSSMSMSMSTTMGSSQNSNIGSST
TPASFSLRSISPTPIRSAHAESISGSGSGSGSSFHGPPPPPFSSPGNNTNASNANSGSGH
HHHHLHHNQASARDLALGHGAITSPPLHHSSHTQQHHANGNYREDLNHASLTTAAGGAAP
AYMASSSSTPAPPGASPSMPSTSLSSNPSTSNNHNHHHQHGAPPLSPRHAPASSASNYYP
PPASSPESRHQSHLHSRDKPASGRVYDPTTDTTKERRVSDSWHNAPQNSTPKAARDPYPY
DRTPADQHHSSSYYSNGHYTSPRQSYNRPRSPLSHSHPNLPVGSHSPPSRTAQLTSPSQR
HVPAATLNSSTNGSSAMSTVIKTEPRAVSPSKPAPVSSTNTPSRSADPMSFSNILSSAEP
APKPAPEPRAPTPEQAPEPEQDADTEVEPEKDIETEPERPPARKTEPVVRKKPGRRPTKG
RASDIREAEAPKGKRRSSIKRESPQPRSASKRLANGQPKASKTWSSEMESKIQRSENQID
NDVSGLDPTEFDEQEYKGRAHKRRRVMLDFDIEQGRLRRDEYTKAVGKKLGLHSELGKRR
YDDVFYDQALHEVREQELFAEKERKKDMQRKRRREKSMAVTIELKEAALARANAAADESE
RQKHLRDAERASKKAQQTKLILQKGIKGPARNLELNLEGGTMSSFLASDAETPKKGRGKG
GRLKKSKEQKKAEKDSAEAAQALLDAGKELPPKEEGKVRIKIKGRPKDKDRDKDTEKSSK
ETKESAKEKKDEASELEKKFTSKGYNQIYEQIWRDMARKDVNKTFKMAVDSYATKGSNLK
KTAILASKEAKRWQLRTNKGTKDLQARAKRVMRDMMGFWKRNEREERDLRKAAEKQEIEN
ARREEADREAARQKRKLNFLISQTELYSHFIGKKIKTDEVERSTDNPEIAQPSSDIPNSK
LDIAEPSGPVGNRVTDFENLDFDNEDETQLQAAAMANAQNAIAEAQKKARAFNNEGDLDM
DEEGEMNFQNPTGLGEMEVEQPKLINAQLKEYQLKGLNWLVNLYEQGINGILADEMGLGK
TVQSISVMAYLAEKHDIWGPFLVVAPASTLHNWQQEIVKFVPEFKILPYWGSAPDRKVLR
KFWDRKHSTYRKEAAFHVCVTSYQLVVSDVAYFQKMRWQYMILDEAQAIKSSQSSRWKSL
LGFHCRNRLLLTGTPIQNNMQELWALLHFIMPSLFDSHDEFSEWFSKDIESHAQSNTKLN
EDQLKRLHMILKPFMLRRVKKHVQKELGDKIELDVFCNLTYRQRAYYTNLRNQINIMDLV
EKATMGDDQDSGTLMNLVMQFRKVCNHPDLFERAEVTAPYSFNYFAETASFVREGSTVTA
GYSTRSLINFELPSLVWTEGGRINKASSENAKAGWRNKALNHMMNIWTPEHVRENSRDSK
AFSWLRFADASSGDVYKATHESLFTRAMNELQKKDTLGQMPIIYDEEEDKKFTPGHALFK
VRARENRRPLAEITSDGVLNKLMNVARENYDDSGLSRLEVAGRPRASAPPVELVCNTISA
VRERQELLFNPGIRKALYGPALSEEKALIEQKVPLELYPSRSLLPKPDSERKRFTEFVVP
SMRKFVTDSGKLAKLDELLFKLKNEGHRVLLYFQMTRMIDMMEEYLTYRNYKYCRLDGST
KLEDRRDTVHDFQTRPEIFIFLLSTRAGGLGINLTSADTVIFYDSDWNPTIDSQAMDRAH
RLGQTKQVTVYRLITRGTIEERIRKRALQKEEVQRVVIQGGGASVDFSGRRAPENRNRDI
AMWLADDEQAEMIERREKELLESGEYDKQKKRGGKRKKAEAPASLDDMYHEGEGHFDDGS
RAGASGTATPAESDTKGKRGRGKAAGKRAKTAKQRLAIADGMVDA
NT seq
5898 nt
NT seq
+upstream
nt +downstream
nt
atggacagcaactttcgatcgacggtgctgcagcggccgcagattggtgatggcgatggc
cgtgagcaacgcgacagagacagagacaaccatgcaccaggacaaggaaatgaaaatggt
cgcggactcgttcaaactggtcttggacctggacctggacctggacctggacatctagat
gatagacaccatccgcgagacatggactctaatgccaatgtcaacgcacaaactggtgca
gggagcgcaatgcaccgacacatgcactcaaacacgtccttgtccatgccctcgtcaatg
tcaatgtcaatgtcaaccacaatgggctccagccagaactctaacattggctcctccaca
acgccggccagcttcagcctgcgctccatctcaccaaccccaatccgctccgcccacgcc
gagtccatctctggctctggctctggctctggctcaagtttccatggtcctcctcctcct
cccttttcatctcctggcaacaacaccaacgccagcaacgccaactcgggcagcggccat
catcaccaccatcttcatcacaaccaagcgagtgcccgtgatctcgccctcggtcacggt
gccatcacgagcccgccgctgcatcacagctcccacactcaacaacaccacgccaacgga
aattatcgcgaggacctcaatcacgcctccttgaccacggctgctggtggtgcagcaccc
gcatacatggcgtcgtcttcttcaacaccagcaccgcctggtgcctctccgtccatgccg
tcgacttcattgtcctcgaatccatcgacttctaataaccataatcatcaccaccaacac
ggcgcacccccattgtcgcctcgacacgccccagcctcatccgcgtccaattactatccg
ccacctgcctcgtcgcccgagtctcgtcatcaatctcatcttcactctcgcgacaaacct
gcatcaggcagagtctacgaccccacgactgacaccaccaaggaacgcagggtatccgac
tcctggcacaacgcgccccagaactccacgccaaaggctgctcgcgatccttacccctac
gatcggacgcctgccgaccaacatcactcatcttcctactacagcaacggccattacaca
tcacctcgacagtcgtacaatcggcctcggagcccgctctctcattcacatcccaacctg
cctgttggctctcacagtccaccaagccgcacggctcaactcacttctccttcacaaaga
catgtgcctgcagccactttgaactcatcaacaaacggctcctcagccatgtcgaccgtc
atcaagacagagcctcgggccgtatcgccctcaaaacccgcgcctgtatcatcgacaaat
acccccagccgatcagccgatcccatgtccttctccaatattctctcaagcgcagaacct
gctcccaagcctgcccccgagcctcgtgctcccactcccgagcaggcccctgagccagaa
caggatgcagacactgaagtcgagcccgagaaagatattgagactgagccggagcgccct
ccagcgagaaagactgagcctgtggtgagaaagaaacctggcagacgacctaccaagggt
cgtgcgtcagatattagggaggctgaggcccccaaaggcaaacgccgctcttcaatcaag
agggaatctccccaacctcgatctgcctccaagcgtctagccaatggccaacccaaagct
agcaagacgtggtccagcgaaatggaaagcaagattcaaaggtccgaaaatcagattgac
aatgacgtctcgggcctcgacccgactgaattcgacgagcaagagtacaaaggacgcgcc
cacaagagacgtcgcgtgatgcttgactttgacatcgagcagggccgtctacgccgtgat
gaatacaccaaggctgtcggcaaaaagttgggtcttcactcggaactcggtaagcgacga
tacgatgatgtcttctatgaccaggcgcttcacgaagttcgcgagcaagagctatttgcc
gagaaggagcgcaagaaggatatgcaacgcaagcgtcgtcgtgaaaagtccatggctgtc
accattgagctcaaagaagccgctttggcgcgagcaaatgctgctgcagacgagagtgaa
cgtcaaaaacacctgcgtgatgctgagcgcgcaagtaaaaaggctcagcagacgaaactt
atccttcaaaagggaatcaaagggccagcacgcaacctggaactcaacttggagggtggt
accatgtccagcttcctggcttccgatgctgagactcccaagaaaggcagaggcaaaggc
gggagactcaagaaatccaaagaacagaagaaggccgagaaggactctgctgaagcagcc
caagctttgcttgatgccggcaaggaattgcctcccaaggaggaaggtaaagttcgcatc
aagatcaagggacgccctaaagacaaggatagagacaaggacaccgagaaaagcagcaaa
gaaaccaaggaatctgccaaggaaaagaaggacgaagcctctgagctggagaagaagttc
acctccaagggctacaaccagatttacgaacaaatttggcgggatatggcacgcaaagat
gtcaacaaaacattcaagatggccgtcgattcctacgcaaccaagggttccaacctcaag
aagacagctattcttgcttcgaaagaagccaagcggtggcagcttcggaccaacaaaggc
accaaggatcttcaggcacgcgctaagcgtgttatgcgtgacatgatgggcttctggaaa
cgcaacgaacgtgaagagcgtgacttgcgcaaagcagccgagaagcaagagatcgaaaat
gccaggcgggaagaagcggaccgcgaagctgcccgccagaagaggaagctcaatttcctt
atttcacaaactgaactctactcccactttattggcaagaagatcaagaccgacgaagtg
gagcggagcacagacaaccctgaaattgctcaacccagcagcgacataccaaatagcaag
cttgacattgcagagccgtctggaccagttggcaatagagtcacggactttgagaatctt
gactttgacaatgaagatgagacgcagctgcaagccgctgccatggcaaacgcccagaat
gccatagcagaggcacagaagaaggctcgcgcgttcaacaatgaaggcgacttggatatg
gatgaagagggcgagatgaacttccagaacccaactgggcttggagaaatggaagtcgag
caacccaagctcatcaacgctcagctcaaggagtaccagctcaagggtctcaactggctg
gtcaacttgtatgaacaaggcattaacggtatcctggccgacgaaatgggtctcggaaag
actgtgcagtccatctccgtcatggcgtacttggctgagaaacacgacatttggggcccc
ttcctggttgtcgcacctgcgtcgacgttgcacaattggcaacaggaaatcgtcaagttc
gttcccgagttcaagattctgccgtactggggaagtgcgccagatcgaaaagttctgcga
aaattctgggacaggaagcactcgacttaccgcaaggaggctgctttccatgtctgtgtt
acgtcatatcagctggttgtatcagacgtagcttacttccaaaagatgcgatggcagtac
atgattcttgatgaagcccaagcgatcaagagctctcagagctctcgttggaagtccttg
ctcggcttccattgccgaaacagacttttgctgactggtacccccatccagaacaacatg
caagaattgtgggcgctcctccacttcatcatgccgtctcttttcgactcccacgacgaa
ttcagcgaatggttttccaaggatattgaatctcatgcgcagagcaacacaaagctcaat
gaagatcaactcaagcgtctgcacatgattcttaagccatttatgcttcgtcgcgtcaag
aaacacgtgcaaaaggaacttggcgacaagattgaactagatgtcttctgtaaccttacg
tatagacaacgggcatactacaccaatctgcggaaccagatcaacattatggacctcgtt
gagaaggccaccatgggcgatgatcaggattcgggtactttgatgaacttggttatgcag
ttccgaaaagtttgcaaccatcctgacttatttgagcgcgccgaggtcactgctccctac
tccttcaactactttgctgaaactgcctcttttgttcgagaaggaagtactgtcacggct
ggctactcgactcgaagtctcatcaattttgagctcccatcgctggtctggacggagggt
ggtcgtatcaacaaagcgtcgagcgagaacgccaaagccggatggcgcaacaaggctctc
aaccatatgatgaatatatggacgcctgagcatgtgcgtgagaactcgcgagattccaag
gcgttctcctggcttcgattcgccgacgcttcctctggcgatgtctacaaggccacacat
gagagtctctttacccgcgcgatgaatgagctgcaaaagaaggacacccttggtcaaatg
ccaatcatttatgacgaggaagaagacaagaagttcacgcccgggcatgccttgttcaag
gtccgtgccagggaaaatcgccgtccgctggctgagattacctccgacggtgtcctcaac
aagctgatgaatgttgcgcgtgagaactacgacgattccggcttgagtaggctagaagtt
gccggccgacctcgtgcatcggcacctcccgttgagctcgtctgcaacaccataagtgcc
gttagggagagacaagaactcttgttcaaccctggcattcgcaaggctctgtacggccct
gctctatcggaggagaaggcacttatcgaacaaaaggtgccactcgaactgtacccttca
cgcagccttcttcccaaacccgacagcgagaggaaacgattcacagaattcgtggtccct
tcgatgcgcaaatttgttaccgacagtggcaagctggctaaactcgacgagttgctattc
aagctcaagaatgagggccatcgtgtcttgctctacttccagatgactcgcatgattgac
atgatggaggaatatctgacgtaccgcaactacaaatactgccgcctggacggttccacc
aaattggaggatcgacgtgacacggtacatgactttcaaactcggcccgagatattcatt
ttcttgctgtctacacgtgcaggtggtttgggaattaatcttacctcagctgataccgtc
atcttttacgactcagattggaatcctaccattgattcacaagccatggaccgagctcac
agattgggtcaaacgaaacaggtcactgtgtatcgtctcatcacgcgcggcaccatcgaa
gaacgaattcgcaagcgagctcttcagaaggaagaagtccagcgtgtggttatccaagga
ggcggtgctagtgttgacttctctggtcgccgtgcccctgagaaccgcaaccgtgacatt
gctatgtggctggctgatgatgaacaagctgagatgattgaacgacgtgagaaggagctc
ttggaatctggagagtatgacaaacagaagaagagaggtgggaaacgcaagaaggcggag
gctcccgccagcttggatgatatgtatcatgaaggcgagggacattttgatgacggtagc
agagctggagcttctggcacagcaacacctgcggaaagtgataccaagggtaagagaggg
cgaggaaaggctgctgggaaaagagccaagacggccaaacagcgtctcgcaattgcggac
ggcatggttgatgcataa
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