Pochonia chlamydosporia: VFPPC_07930
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Entry
VFPPC_07930 CDS
T09407
Name
(RefSeq) transcription initiation factor TFIID subunit
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
pchm
Pochonia chlamydosporia
Pathway
pchm03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pchm00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
VFPPC_07930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pchm03021
]
VFPPC_07930
03036 Chromosome and associated proteins [BR:
pchm03036
]
VFPPC_07930
Transcription machinery [BR:
pchm03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
VFPPC_07930
Coactivators
SAGA/TFTC/STAGA complex
VFPPC_07930
Chromosome and associated proteins [BR:
pchm03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
VFPPC_07930
STAGA complex
VFPPC_07930
TFTC complex
VFPPC_07930
SAGA complex
VFPPC_07930
SLIK complex
VFPPC_07930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIID_NTD2
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_EML
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
WDR55
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_SCAP
Beta-prop_DCAF4
Beta-prop_WDR19_1st
Beta-prop_HPS5
WDR90_beta-prop_4th
LisH
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_EIPR1
eIF2A
ARMC9_LisH
Motif
Other DBs
NCBI-GeneID:
28850711
NCBI-ProteinID:
XP_018143448
UniProt:
A0A179FMG5
LinkDB
All DBs
Position
4:1645364..1648128
Genome browser
AA seq
755 aa
AA seq
DB search
MSGQPPPGAPAANYAAPPATSPAGPAPATTGAAGTTGSAMSNQNLNQIVTDYLLKRGFNR
TEEIFRQESKHLGPDGKPIQQLANIGPKKYQKAFKLLKEWVDNNLELYKFELSKLLWPMF
VYSFLELAGHGYAEDAKAFLKELSTYFQAVHADDLKTFSTISLPQHVAENPTAKLYKENK
YRIPLNQHATGDLFNFLERESEQGGSVIRQLLVTYCQIDSTARGPITPFSFEAVFRRSKN
ADIEEVDAKEGIPGVNIGLSNKDILDPAQPLKLGPLPMDPDLRDDVRAELEDEEKRNPPV
EGTSSMLEDFDQKIKREEDADAPSRADLPLPPSRPRDIMLEMQRVRENRDRFKIDGRTGG
VGTSVSACMFTFHNTFGTVSCMDFSDDGQLVAAGTSESYIRVWSLDGKGLPTMNAHEKDA
KFNSRKLIGHAASVYDVSFSESASGPAQKLFGDDGRHNPAMDGRPKLLLSCSADGHVRLW
SLESWTCLCLYKSHDGPIYRTLWGPHGHYFISGGYDKALRVWMQDHASPQRLLVGHDTAI
SAICWHPNGMYVFSASDETDKSIRMWSVVTGACVRVFAGHADYITALECAPNGKILASAD
LAGNIFFWDLSKGTRIKRSRGHGRGGIWSLSFSVESNVLASGGQDGTVRLWDVEEPVDPQ
KAAAQAGLEAAAASAAGDGATTAGVAADASRASASAPGQSAAAPTSTGTQKKKGKEVMVT
HDQISAFPTKKTPVMRVKFTRMNLVMVGGCYDPER
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atgagcgggcagcctccccctggggcaccagctgccaactatgccgcgccgcctgcaaca
tccccagccggccctgctcctgcaacaacaggtgctgcaggaacgactggaagcgccatg
tcgaaccagaatctgaatcagattgtcaccgattacctcctgaaaagaggtttcaatcgc
acagaagagatcttccgccaggagtctaaacacttagggccagatgggaagcccatccag
cagctggccaatattggccccaagaagtatcaaaaggcattcaagcttttgaaagagtgg
gtagacaacaacttagagctgtacaaatttgagctatcgaagcttctctggccaatgttt
gtctattcatttctcgaacttgcagggcatggttacgcagaggatgccaaagcatttctt
aaagaattgagcacatacttccaagctgtgcacgctgatgacctgaaaacattctcaacg
atttccttaccacagcatgtcgctgagaatcctaccgcaaaattatacaaagaaaacaaa
taccgaataccactaaaccaacacgccaccggtgatttatttaactttttggagcgagaa
tccgagcaggggggatctgtcattcgccagctgcttgtcacctattgccaaattgattca
accgcccgtggccccattacccctttcagcttcgaggctgtcttccgacgttccaagaat
gccgatattgaagaagttgacgccaaagaaggtattccaggtgtcaatatcgggctgtct
aacaaagatatcctagaccctgctcaacccctcaaattgggccctttgccaatggacccc
gatctgcgggacgacgtacgcgccgaacttgaggacgaggaaaagcgaaatccgcctgta
gaaggcacgagtagcatgctggaagactttgaccagaagattaagcgcgaggaagatgca
gatgcccctagcagggccgacttacccttaccgccgtctcgaccgcgagacattatgctc
gaaatgcagagggtgcgggaaaatcgtgatcgcttcaagatcgatggccgaactggtggc
gttggaacatccgtcagcgcatgcatgtttacatttcacaatacgtttgggaccgtatca
tgcatggacttctccgatgatggccagctagtcgctgctggcaccagcgagtcttatatt
cgagtctggtcactcgatggcaagggtcttccgactatgaacgcacacgaaaaggacgcc
aaatttaacagtcgcaagctgattgggcatgcggcatcagtttacgacgtttctttttca
gaatcagcatccggtccagctcagaagctgtttggcgatgacggccggcacaatcctgca
atggacggcagacccaaacttcttctgtcttgctcagctgatggccatgtgcgattgtgg
tcgttggagtcttggacatgtctctgtctctacaagtctcatgatggtcctatatatcgt
acgctttggggaccgcacggacattattttatcagcggcggttacgacaaggcgctacgt
gtgtggatgcaagaccatgcttcaccacagcggctcttggtaggacatgacactgctata
tctgccatttgctggcatcccaatggcatgtatgtcttttccgcgtctgatgagacagac
aagtctattcgaatgtggtctgtggtgactggagcttgtgttcgagtctttgctggccat
gccgattacattacagcccttgagtgcgctccaaatggcaagattctagccagcgccgat
ctagctggtaatatcttcttctgggaccttagcaagggcactcgtatcaagcgttcacgc
ggtcatggccggggtggcatttggtctctgagctttagcgtggagtcaaacgtcttagcc
tcaggtggacaagacggaacagtaagactctgggatgttgaagagcctgttgacccccaa
aaggctgctgctcaagccggcctggaagccgctgcagcttccgcggctggcgatggtgca
accacagccggagtggctgcagatgcttctcgcgccagtgcttccgctcctgggcagtct
gccgctgccccaacgtccacagggactcaaaagaagaagggcaaggaggtcatggtgacg
catgatcaaatcagtgccttcccaacaaagaagacgccagtcatgagagttaaattcaca
cgaatgaacctcgttatggtcggcggttgctacgatcccgagcgatag
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