KEGG   Pochonia chlamydosporia: VFPPC_07977
Entry
VFPPC_07977       CDS       T09407                                 
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
pchm  Pochonia chlamydosporia
Pathway
pchm03030  DNA replication
pchm03410  Base excision repair
pchm03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pchm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    VFPPC_07977
   03410 Base excision repair
    VFPPC_07977
   03420 Nucleotide excision repair
    VFPPC_07977
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pchm03032]
    VFPPC_07977
   03400 DNA repair and recombination proteins [BR:pchm03400]
    VFPPC_07977
Enzymes [BR:pchm01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     VFPPC_07977
DNA replication proteins [BR:pchm03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    VFPPC_07977
DNA repair and recombination proteins [BR:pchm03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      VFPPC_07977
SSDB
Motif
Pfam: DUF1744 POL2_thumb DNA_pol_B_exo1 zf-DPOE DNA_pol_B DNA_pol_B_exo2 zf_DPOE_2 RNase_H_2
Other DBs
NCBI-GeneID: 28850750
NCBI-ProteinID: XP_018143510
UniProt: A0A179FMX8
LinkDB
Position
4:1806017..1812766
AA seq 2212 aa
MPNTSLRKPQKGFRRGGKAAYHGQRTRTFAATSRAEGTSADEKWERTRLAQTIDENFGFG
RYESGKKKEGWLVNVQPTAIEDERIPGGRAALDCYFIEHDGATFKATVEYEPYFLIAVKR
GHESEVEEWVKRVPGDGVVKTIRRIEKDDLNMPNHLLGYRRTFLELKFANVNDLMAARRD
IMPVAEKNKKNMNAMDAYAEVATANANFDLYDDDLRTDDRTTNSFAEASDYIVDIREYDV
PYHVRVMIDLDIRVGKWYYVEVKHGVTKILPNEDRSLPADPVVLAFDIETTKLPLKFPDA
AIDQIMMISYMIDGQGFLITNREIISEDIGDFDYTPKPEYPGPFMIFNEPNEKALIERFF
LHVKEARPTVIATYNGDFFDWPFVEARASVNGIDMYQEIGWKKDSEDQFKCNYGVHMDCF
HWVNRDSYLPQGSRGLKAVTVAKLGYDPDELDPELMTPYASERPQTLAEYSVSDAVATYF
LYMKYVHPFIFSLCTILPLGGDDTLRKGTGTLCEMLLMVQAYQKEIVLPNKHQSPKEAFW
DGHLLDSETYVGGHVESIEAGVFRADIPVDFAVDTGAVDELLRDLDAALKFVITVEEKKS
LDDVENYDEVKEQISQRLMKLKETPNRNERPLIYHLDVASMYPNIMTTNRLQPDSMIDES
DCAACDFNRPGKTCDRRLPWAWRGEYLPAKRDEYNMIRHALENEKFPGKTPHAPMRTFDD
LSADEQAALVRKRLQIYSQKVYHKIHDSTTIVREAIICQRENPFYIDTVRDFRDRRYDYK
GKAKVWKGKTETLKSSGAPAGEVDSAKKMIILYDSLQLAHKVILNSFYGYVMRKGSRWYS
MEMAGVTCLTGATIIQLARQLVERLGRPLELDTDGIWCMLPATFPENFAFKLRNGKKLSI
SYPCVMLNHLVHDKFTNHQYQTLVDQKTFKYETHSDNSIFFEVDGPYKAMILPTSKEEDK
NLKKRYAVFNDDGSLAELKGFEVKRRGELKLIKIFQQQIFKFFLEGEDLTQCYTAVAKVA
NRWLDVLHSKGSTLADEELMELISENRSMSKTLEEYGSQKSTSITTAKRLADFLGEQMVK
DKGLNCKFIICSRPRNAPVTERAVPVAIFSAEESIKRTYLRKWLKEEPTDTDPRALLDWD
YYLERLGSVIQKLITIPAALQKVRNPVPRVPHPDWLQRRINIKDDKMKQKKLTDLLAKEP
LGDITNLNGPRMDDLEDYGSKLLKPKQVSTAIASSQPAPTVQKRKSPEPAENTDPMAALP
KVMPNPSEDYPAFLKYQKQKWKIQKQARIRRRQLFGDRRGMTGNNIQQTFMKQAHITFMN
TWQLLHLQATDSPGVVTAHVLIDAKIHTLKVNVPRQVFLNLKGSDLPDVDIAGCEVEQVN
YTLPNGHPSSHLFKLTVPEDVYFNEAAKFSLLFNHPSVEGVYEKQVPLNIRAVLRLGNQC
TIDEKQNAVLGKGLEQGFDLFGLKRPAKTRTYLESSPLAYIYLSHITAGERQIFGIFSTT
SDQGHIIILQKNKDSGQDLPNVTRLYSEMLANRAAEVAGTNWQDCFAYQEKITFKITQVS
TRRKAHLEISDVVKKMRKDEVRPQMMVIQSSQRNLLVHDIPVLGEFPVLPLKYNATDSSL
PPLGWQAIVARRLVGHYLGLGSWILHLTALARYGDVPLCNLEREDPRFLIDIAYARRLQA
NGVVLWWSAGPRPDHAGYEKDDVLGPLDAVKMPNVNNPGTFASVCIDLDVRNLAINTILT
SSLINELEGADSVSFNPTADGSETLASDNAFANAGVLVLREMVKAWWAEACKGSTMADVL
VQHLVRWVENPDSFMYDRALHYYVQMMSRKAFQQLMADFRRVGSQVVFANANRLILQTTK
AEVGNAFAYSQYIIKSIKSKPLFHFIDLEIKEYWDYLVWYDEFNYGGKGCQEVIEADEQN
LETIMHWQMATFLPVRLQPTFQEWIIAFIQLMHSLKRPTGNDPDSTPRLTQLPNRNAENE
ENQIILGKAYEKPLKRAITGLISQQRRELLHPELAEDYSFPSLPGSHLTPRGPMLELVKS
LMQVLSLDKNITLEARLLRKELLALFEVREFSKEGTFTNPSESLKLVQISCDSCTMARDL
DLCRDEDLQGNDGRGWQCSFCSTEYDRVAIEERLLCMVESWTVEWATQDLKCARCGALRV
NDLMEHCTCSGEWKEIVSREEITRKLKVMRKVAKYYGLRMLSDIVEGLFSDI
NT seq 6639 nt   +upstreamnt  +downstreamnt
atgcccaacacaagcttgcggaagccccaaaagggctttcgtcggggtggcaaagctgca
tatcacggccaaagaacacgtacttttgccgctacgtcacgagcagaaggaacttcagca
gacgagaaatgggagcgtacaaggcttgctcaaacgatagacgagaacttcggtttcgga
agatatgaaagtggaaaaaagaaggaaggatggcttgtgaatgttcagcccactgccatt
gaggatgagagaatacccggcggaagggcggcgttagactgctacttcatcgaacatgac
ggtgcaacgttcaaagcgactgtcgaatatgagccatactttcttattgcagtgaagagg
ggtcacgaatcggaggttgaggaatgggtcaaacgagttccaggcgatggtgtcgtcaag
actattcgcagaatagagaaggatgatttaaatatgcctaatcatcttctcggatatcga
cgaacgtttttggagctcaagtttgccaatgtcaacgacctcatggctgccaggagggat
attatgcccgtggccgagaagaacaagaagaatatgaatgccatggatgcatacgcagaa
gttgctacagccaatgccaacttcgacctttacgatgatgatttacgaactgatgacaga
acgaccaactcattcgccgaggcgagtgactacattgttgatattcgcgaatatgatgta
ccatatcacgtgagagtaatgatagacttggatatacgagttggcaaatggtactacgtc
gaagtgaagcacggagtgaccaaaattctgcccaacgaggaccgatctcttccagcggat
ccggtagttttagcattcgacattgagaccacgaagcttccgttaaaatttcccgacgca
gccatcgaccaaattatgatgatttcatacatgattgacgggcaaggattcttgattaca
aaccgagaaatcatctctgaagatattggagacttcgactacacacccaaaccagaatac
ccaggaccatttatgatcttcaatgaaccaaatgagaaggctcttatcgagcgattcttt
cttcacgtcaaagaagctagacctactgttatcgctacttacaacggtgactttttcgat
tggccgtttgtcgaagcgagagcgagcgtcaatggtatcgacatgtaccaagaaatcggg
tggaagaaagacagcgaggatcagttcaaatgcaactacggtgtccatatggactgcttc
cactgggtcaatcgtgactcttatctgcctcagggttctcgaggtctgaaagctgtaaca
gtagccaagctgggatacgatccggatgaacttgatccggagttgatgacgccctacgcc
agcgagcgaccgcaaacactggccgagtactcagtgtctgatgccgtcgctacgtatttc
ctgtatatgaaatacgttcaccccttcatcttctctctgtgtaccatcctgcccttgggt
ggtgatgataccctcagaaagggaactggaacgctgtgtgagatgttgctcatggtccag
gcatatcagaaggaaattgtacttcccaacaaacaccaatctcccaaggaagccttttgg
gatgggcatctgttagattcagagacatatgtcggaggacacgtcgaaagtatcgaggct
ggtgtcttcagagctgacattcccgtggacttcgctgtcgacacgggggcagttgatgaa
ttgcttcgtgacctggatgccgctctaaaatttgtcattaccgtggaagagaagaagtca
ctggatgatgttgaaaactacgatgaagtcaaggaacaaatttcacagagattaatgaag
ctcaaggaaacaccaaaccgaaatgaaaggccactcatttatcacttggacgttgcctct
atgtatcccaatatcatgacaacaaaccgacttcaacctgattccatgattgacgagtcg
gattgtgcagcttgcgatttcaaccgacctggaaagacttgcgatcgaagactgccctgg
gcctggagaggagagtatcttcctgccaagcgagacgaatacaacatgattcgacatgct
ttagaaaatgaaaagttcccaggaaagacgccacatgcgccaatgcgtacatttgacgac
ctgagcgccgacgagcaggccgctctggtgcgaaagcgtctccagatatactcacaaaag
gtataccacaagatccatgattccactaccatcgtccgagaagccatcatctgccaaagg
gaaaatcctttctatattgataccgtgcgagacttccgtgatcgacgatacgactataaa
ggaaaggccaaagtctggaagggcaagacggaaactctcaaatcatccggtgcgcctgcg
ggtgaagttgattctgccaagaaaatgatcattttgtatgattctctgcagttggcacac
aaggttattctaaactccttttatggctacgtcatgaggaaaggttcacgatggtattcc
atggagatggccggtgttacctgcttgaccggagcgacaatcatccagctggctcgacag
ctcgtggaacgtttgggaagacctctggaattggacactgatggtatctggtgcatgttg
ccggcaacatttcccgagaactttgccttcaagttgaggaacggcaagaagctctccatc
tcatatccttgtgtcatgttgaaccatcttgtccatgacaaattcaccaatcaccaatat
cagacactggtagaccagaagacattcaagtacgaaactcatagcgataactccatcttc
tttgaagtcgacggtccgtacaaggcaatgattctaccgacctcaaaagaagaagacaaa
aatttaaagaagcgatatgcagttttcaacgacgatggtagtcttgccgaattgaagggt
ttcgaggtgaagagacgtggtgagctcaagctcatcaaaatcttccaacagcaaattttc
aagttcttcctagaaggcgaggatctgacgcaatgctacactgctgttgccaaagttgca
aatcgatggcttgatgttctccacagcaaagggtcaaccttggcggatgaagagctcatg
gagttgatttcggaaaaccgaagcatgtccaaaactttggaagagtatggctcgcagaaa
tccaccagtattaccacggccaagcgtctcgcggacttcttgggcgagcaaatggtcaag
gataaaggtctaaactgtaaattcatcatttgttcaaggccacgcaacgcacccgtcaca
gagcgtgctgttccggtggccatcttctcagcagaagagtcgatcaaaaggacgtacttg
agaaagtggctcaaggaggagcccacggatactgacccgagagccctcctggattgggat
tactatctggagcgtctagggtcagttattcagaaactgatcacaatcccagctgctttg
caaaaggtccgaaatccagttcctcgagtgcctcaccctgactggcttcaaaggcgtatc
aacatcaaggacgacaaaatgaagcagaagaagctcacagacctgttggctaaagaaccc
ctgggtgacatcacgaatctcaatggtccacgaatggacgacttggaagactatggatcc
aaactcctgaagccaaagcaagtaagcacagcaattgcctcctcgcaaccagcaccaacg
gttcaaaaacgcaaatcaccagaacctgccgagaatacggatcccatggctgcgctacct
aaagtcatgccaaacccgtctgaagattatcccgccttcttgaaatatcagaaacaaaag
tggaaaattcagaagcaagcgcggatacgccgaaggcagctgttcggcgacaggcgaggc
atgactggcaacaatattcagcagacgttcatgaaacaggcacacatcacattcatgaat
acgtggcagctgctacacttgcaagccactgatagccctggtgttgttactgcccatgtt
ttgattgatgcaaaaattcatactctgaaagtcaacgtccctcggcaggtattcctcaat
ctgaagggcagcgaccttccggatgttgacattgcaggctgcgaggtagagcaagtcaac
tacactcttccaaatggccatccttccagccatctctttaagcttacagttcctgaggac
gtttatttcaatgaagcagccaaattctctcttttgttcaaccaccctagcgtggagggc
gtctacgagaaacaagtaccactgaacattcgagctgtgctccgccttggaaaccaatgt
accattgatgaaaaacaaaatgcagtacttggcaagggtctagaacagggctttgatctg
tttggtttgaaacggccagcaaagactagaacttacctggagtcatctcccttggcttac
atttatctttctcacatcacagctggtgagcgtcagatcttcggtatcttctcaactaca
tcggatcagggccacatcatcatccttcagaaaaacaaggactctgggcaagacctcccc
aatgttacgagactgtattctgaaatgttagccaatcgggcagcagaggttgccggtacc
aactggcaagactgcttcgcctaccaggaaaagatcacgttcaagataacacaagtgtct
actcgccgaaaagcgcatctagagatcagcgacgtcgtcaaaaagatgcgaaaagacgag
gtccgaccgcaaatgatggtgatccaatcttcacagcgcaacctgctcgtccatgacatt
cctgtcctgggagaattccccgtcttgccgttgaagtataatgcaacagatagttccctc
ccgccgcttggctggcaagctattgttgcccgcagacttgtcggtcattatcttggcctt
ggctcatggatattacatcttactgcacttgcgagatatggtgatgttccattgtgtaac
ttggaacgggaggatcctcgattcctgatcgatattgcctatgctcgtcgtctacaggcc
aatggagtcgttctctggtggtcagctggtcctcgaccggaccacgctggctatgaaaag
gatgatgtccttggtcctctcgatgctgtcaagatgcccaatgtcaataatccaggtact
tttgcctcggtgtgcatagacttggatgtacggaaccttgcgatcaacacgatactgacc
tcttcactcatcaacgaactggagggggcagactcggtgtcgttcaacccgacggccgat
ggatccgaaacgttggcttctgataatgcctttgccaacgctggtgttctcgttctgcgc
gagatggtcaaagcctggtgggcagaggcctgcaaaggtagcaccatggcagacgttttg
gttcaacaccttgtccgttgggtagagaacccagactcgttcatgtacgacagagcatta
cactactacgtacaaatgatgtctcgcaaggccttccagcaactcatggcagatttcaga
cgagttgggtcacaggttgtttttgcgaatgccaaccgcttgattctccagacaacgaaa
gctgaagttggcaatgcttttgcctacagccagtacatcatcaagtcgatcaagagtaag
cccctgtttcactttattgatcttgagatcaaagagtactgggactacctggtgtggtac
gacgaatttaactatggcggcaaggggtgccaggaggtcattgaagcagacgaacagaac
ctcgaaaccatcatgcattggcaaatggccacttttctccctgtacgactgcagccgacg
ttccaggaatggatcattgcgtttatacaactcatgcacagcctcaaacggcctacgggc
aatgatcccgactcaacccctcgccttacacagctgcccaaccgcaatgccgaaaacgag
gagaatcaaataatccttgggaaggcatacgagaagccactgaaaagggcaatcaccggt
ctgataagtcagcaaaggcgagagctcctgcacccagaactagcagaagactatagcttc
cctagtctgcctggttctcacttgactccgcgaggcccaatgctagagttggtcaagtca
ctcatgcaagtactctctcttgataagaacattactctcgaagcccgtctactgcgtaag
gagctcttggcattattcgaagtccgagaattctccaaagaaggcacctttacaaacccc
tcagagagtcttaagctcgttcaaatctcatgcgacagctgcaccatggcccgtgacttg
gacctctgcagagatgaagatctgcagggaaatgacggccgaggctggcaatgcagtttc
tgcagcacagagtacgaccgtgttgctattgaagagagattgctgtgcatggtcgagtct
tggacggtggaatgggcaacgcaggatctcaaatgtgctcgttgtggtgccttgcgagtg
aatgatttaatggagcattgtacatgcagtggggagtggaaggagattgtgtctcgagag
gagattacccgaaagttaaaggtcatgaggaaggtggccaaatattatgggctgaggatg
ttgagcgatattgttgaaggtctgttttcggatatttga

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