Pochonia chlamydosporia: VFPPC_08026
Help
Entry
VFPPC_08026 CDS
T09407
Name
(RefSeq) eukaryotic translation initiation factor 2c
KO
K11593
eukaryotic translation initiation factor 2C
Organism
pchm
Pochonia chlamydosporia
Brite
KEGG Orthology (KO) [BR:
pchm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pchm03019
]
VFPPC_08026
03036 Chromosome and associated proteins [BR:
pchm03036
]
VFPPC_08026
Messenger RNA biogenesis [BR:
pchm03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
VFPPC_08026
Chromosome and associated proteins [BR:
pchm03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
VFPPC_08026
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
VFPPC_08026
microRNA pathway
RISC loading complex
VFPPC_08026
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
DUF4012
Motif
Other DBs
NCBI-GeneID:
28850791
NCBI-ProteinID:
XP_018143563
UniProt:
A0A179FLG2
LinkDB
All DBs
Position
4:complement(1966591..1969636)
Genome browser
AA seq
994 aa
AA seq
DB search
MSDRGRSPTPSGGSAGSRRPSQGPQSSAPGSRTGSPSRPGPGSGWVAGPGYDPAKPAGQP
DKGNTRMELPPDAYVTDAQKDMFAARGNRFNTEGSNAVVEVNQYRMRKFNFSKNIYQYDV
VISPDTERKAALMKKIWTNSATKAALQKYSYEMWIFDGRKLAWAPGKVDRGELRFTVDLD
EGKRPQGAPVRDGARFHVTLRATTEVQVSAIRGYLDHKVQFNSGVQVALNFLDHLLRQWP
SQHMTAIKRNFYSDTAQGRPLLDGHVLEVHKGIYASIRLSHNIAQGGTGLALNVDIANTV
FWTGPQPVDQLMCNYLGICDRRWKGLNPSTISQHLRPVRDNKGRVQSSEAFKNLRKMRKL
KFTIKHPNRPKELSEKVHTIMDFSFDEKYGPEGATAKTVTFEYNGSQISVADYYKQKYKA
HLKYPSLPLIFAGKAGHIPMEFAHIESMQRYAFKLTPDQTAAMIKIAVTRPQQRRGDIEK
NYQGLQLTADPYLKMYGVEFEPTFTKTDAKILPAPQVNFGQGNADPKFAGRWDLRGKKFW
KQNIAPLQNWGFIVMDNCANFGQLQAFAKMFRSTFLGHGGKCPVDAVLLNVPGNIKNDIA
QAMAWAHGEICKQRGYTQLLFVVVGHKNSPHYERLKKSADCRFGILSQVVNGAAVVSNNG
QYHSNVCMKVNAKLGGTTSRTLAPWKSQPTYFPKDRPTMIIGVDISHGAPGGGLPSTGAM
TMSVDRDANRYAAMVESNGYRVEMLTSRNVHFMFGQLSKYWMAGHDGAFPKHIIYFRDGV
AEGQFAQVLDQEIREIKLYLREKAPNAPLPKFTVIVATKRHHIRFFPQRGDRNGNALPGT
LVEREVTHPFMWDFYLCSHVAIQGTARPVHYHVILDEMGVPVNDLQKMIYHQCYSYARST
TPVSLHPAVYYAHLACARARAHENIATSEGFRAGAKGHEMIRDQVAKGQTLGGPPRGTDA
PPLLQLGGKPGGDKPPADGELRQRDFFRSTMWYI
NT seq
2985 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatcgtggacgctctccaactccctccgggggatcagctggatctcgccgcccg
tctcagggcccacagagctcagctcccggaagtcgcaccggatcgccttcgaggccaggt
ccaggctctggatgggttgctggtcctggctatgaccctgccaaacctgcgggacagcca
gacaagggaaacaccagaatggaacttcccccagatgcctatgtcaccgacgcccagaaa
gacatgtttgccgcgagaggtaataggttcaatactgagggcagcaatgctgtcgtcgaa
gtgaaccagtatcgaatgaggaagtttaacttctccaaaaacatctatcagtacgatgtg
gtcatctctccggacactgaacggaaggcagcattgatgaaaaaaatctggacaaactca
gccaccaaagccgcgcttcaaaagtattcatatgagatgtggatctttgacgggcgaaag
cttgcctgggctcctggcaaggttgatcgtggcgaacttcgcttcacagtcgacttggac
gaaggaaagcgacctcaaggtgcaccggtgcgcgatggcgctcgatttcatgttaccctg
cgagccaccacggaagtgcaggtcagtgcgatccgcggatatcttgaccacaaagtgcag
ttcaactccggcgtccaagtcgctttgaactttttggatcacctgctccgccagtggccg
tctcaacatatgacggccatcaaaaggaacttctacagtgatacggcacaaggcaggcca
cttttggatggccacgtccttgaggtgcacaagggcatatatgcatctattcgcctcagc
cacaacattgctcagggtggaacaggcctcgctctgaatgttgacattgccaacacagtt
ttctggactggaccacagccagtagatcaactcatgtgtaattacttgggtatttgtgat
cgaagatggaaaggcttaaatccgtcgactatcagtcagcaccttcggcctgtgcgagat
aacaaaggcagagtgcagtcttcggaggctttcaagaacctccggaagatgagaaagctg
aaattcactatcaagcacccaaacaggcccaaagaattaagtgaaaaagttcataccatc
atggacttttcttttgatgaaaaatatggccctgaaggtgctacggccaaaactgtcacg
ttcgaatacaatgggtctcaaatctctgttgccgactactataaacaaaagtacaaggca
catctcaaatatcccagcctgccccttatttttgctggcaaagcagggcacatccccatg
gaatttgctcacattgagtcgatgcaacggtatgcgtttaagcttaccccagatcaaacg
gcagcaatgatcaaaattgccgttacgcgtcctcaacagcgacggggggacattgaaaaa
aattaccagggtcttcaactcacggctgacccgtacttgaaaatgtacggtgtcgaattt
gagccgacgttcaccaagacggacgccaagattctgccagcccctcaagtaaactttggt
caaggcaatgcagaccctaagttcgctggccggtgggatcttcgcggcaagaagttctgg
aaacagaatatcgcgcctctgcagaactggggtttcatcgttatggataattgtgctaat
tttgggcaattgcaagcttttgccaaaatgttccgaagcacattccttgggcatgggggc
aaatgccctgttgatgcagtcttgttgaacgttcccggcaacatcaaaaacgacatcgct
caagctatggcttgggcacatggtgaaatttgcaagcagagaggatacacacagttgctc
ttcgtggttgttgggcacaagaacagccctcattacgaacgactcaaaaagtccgcagac
tgcagatttggtatactttcgcaagtcgtcaatggtgccgctgttgtgagcaacaatggt
cagtaccactccaatgtgtgtatgaaggtcaacgcaaagcttggaggtacgacgtctcgt
actcttgcaccgtggaagagccagccaacatacttccccaaggatcgtccaaccatgatt
atcggtgttgatatctcgcatggtgcacctggaggtggattgccatcaacaggtgcgatg
accatgtctgttgaccgtgatgccaacagatatgccgccatggtcgaatcgaatggctat
cgcgttgagatgttgacgtcccgaaatgttcacttcatgttcgggcagttgtctaaatat
tggatggctggtcacgatggtgctttcccgaagcacattatctacttccgagatggggtt
gccgaaggtcagtttgcccaggtcctcgatcaagagattcgagagatcaagctgtatctt
cgggagaaggcacccaatgctccattacccaagttcacggtgattgtagctaccaagaga
caccacattcgcttttttccccagagaggcgatagaaatggcaatgcgctccctggcacc
ttggtggagcgtgaggtcacgcatcccttcatgtgggatttttatctctgctctcatgtt
gccattcaaggtaccgcccggccggttcattaccatgtcatactcgatgaaatgggtgtt
ccggtgaatgacctacaaaagatgatttaccaccagtgttactcttacgctagatcaaca
acaccagtgtcgctgcaccctgcggtgtattatgcccatctggcttgcgcccgagcacga
gcgcacgagaacattgcaactagcgaaggctttagggctggtgccaagggacatgagatg
attcgcgatcaagttgcaaagggtcagacgctgggaggcccgccacgaggaacggatgcg
ccgcctttgctccagcttggaggaaagccagggggagacaagcctccagctgacggcgaa
cttcggcaaagggacttctttagaagcaccatgtggtacatctaa
DBGET
integrated database retrieval system
