Pochonia chlamydosporia: VFPPC_08038
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Entry
VFPPC_08038 CDS
T09407
Name
(RefSeq) SNARE-dependent exocytosis protein (Sro7)
KO
K08518
syntaxin-binding protein 5
Organism
pchm
Pochonia chlamydosporia
Brite
KEGG Orthology (KO) [BR:
pchm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pchm04131
]
VFPPC_08038
Membrane trafficking [BR:
pchm04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
VFPPC_08038
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
VFPPC_08038
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lgl_C
Beta-prop_WDR36-Utp21_1st
Beta-prop_IFT140_1st
WD40
WD40_Prp19
Beta-prop_EML_2
Beta-prop_WDR5
EIF3I
Beta-prop_THOC3
ANAPC4_WD40
Beta-prop_RSE1_2nd
Beta-prop_RIG_2nd
WD40_WDHD1_1st
Motif
Other DBs
NCBI-GeneID:
28850802
NCBI-ProteinID:
XP_018143578
UniProt:
A0A179FMV4
LinkDB
All DBs
Position
4:<2008011..>2011134
Genome browser
AA seq
989 aa
AA seq
DB search
MSSFLRSKQAGIQNDLSASIRPELLMPDEQARYGINSQIGCLGYDPVQSLLAIGTKETRF
GPGKISVFGQRRVQKTLQPSRPTSFHFVQFSANKIVSLDTKNELGLWDLDTGSRLATQVI
SGGTAVALVTDPMLDWAFIGLQNGEVLAYDLDRRNLVRSFRLPNFWHQKDSSGRPAPLIC
MSMHPRDAGKLLLGFAHGAVIYSFKQNKPVQFLEYVLPAGAPGGNSLGIDTTRRPRLTHA
LWHPSGTFIVTAHEDGSLVLWDPKEQKIITARTLKDNGVHHPAPNSAKTSFSEPFTKVVW
CCKANCEDTGLLVAGGETSNTSPRNLTFIELGLTPMYTTSSWQALSDYFMGKRQVPLSLP
PGAQAVDFLLIPRSSPHFAGAQDPIAVIVLLSSGELITMSFPSGYPISPTNQLHPSMFFV
HPFITKVNVSSLERPRWLTMTERRDQGEPLLKGGAEAQRPKKRFEERTIIQAAHGDSTIH
IWDSGHADEIENGGQLQVDVARTLDRYDDIDITAMSMSSGTGDFAVGTRTGEAIVYKWGG
NRFYGRDVPQQLDPNPKGLTDISSRAEPTLKEGLQPYILYEMMQGPITAIQASNVGFVAV
GSELGFLTLIDLRGPNIFYQAPMTDFAKQDKRSSFFKREHHHRAKDEPQKEWPVVIEFGV
MTLDEDKYSSICCFVGTNLGKVITFKLLPAAGGAYTAQLAGVVVFDGAVISLSPINAQTG
KPALATGSIVGSLREGKQVDGALVAVTEKEMRVFRPATSKGASREFDDILCRAASVAELE
LQGFAVVALLADQSVRAYSIPGLKDLGKAELPMIDPTMSKLSVVTQTGDIFAWTGPSEMS
VIHVWGSGKPLQQSPDIMINPDLQCPPRPTISNVQWISGTQYVSPLDLDVLVGGPDRPPS
KRMLDAAAAERRATAGGTAAVAGGVAASQETWGSYLSRQVNERTEKLTFLNSGVDTLQDQ
SQAWADDINKFVNQQKRNLVMGSIKSKFF
NT seq
2970 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcttcctacgcagcaaacaggcggggatacagaatgacttgtccgcgagcatc
cggccggagcttctcatgccagatgagcaagctcgctatggcataaatagtcagatcgga
tgcctcggatatgacccggtacaatcgctccttgccatcggcaccaaggagaccaggttt
ggccctggcaagatatccgtctttggccaacgtcgagtccagaagaccttgcaaccatct
cgtccgacctcgttccacttcgtgcaattcagtgccaacaagattgtgagtttggacaca
aaaaatgaacttgggctttgggatttggacacgggctctcgactggcgactcaagtcatt
agtggtggtacggccgttgcccttgtaacggaccctatgttggactgggcctttattgga
ctacagaacggtgaagttttggcatatgatcttgataggagaaacttggtccgatctttc
aggttacccaacttttggcaccagaaagactcgtctggaaggccagcacctctgatatgt
atgtctatgcatcctagggatgccggcaaactgttactcgggtttgctcatggcgcggtc
atctactctttcaaacaaaacaaaccggttcagtttctggagtacgtactccctgccgga
gcaccgggaggcaatagtttgggaatcgacacaacacgtcgccctcggctcacacatgcc
ctctggcatccctcaggtacattcatcgttacagcccacgaagatggcagtttggttctg
tgggaccccaaggaacagaaaattattaccgcccggacattgaaggacaatggtgttcat
catccggcgccaaactcagccaaaacgtcgttctctgaaccattcaccaaggtcgtatgg
tgctgcaaggcaaactgtgaggataccgggttgctggtagctggtggcgaaacttcgaat
acttcccccagaaacctcacattcattgaactcggcttgacgccaatgtatacaacgtca
tcatggcaggccctatctgattattttatgggcaaacggcaggtgcctctgtccctacca
cctggtgcgcaggcggtggactttctcctcattcctcgctcatctcctcatttcgccgga
gcccaggaccccattgcagtcattgtccttttatcatctggtgagctcatcactatgagc
tttccttctggatatccaatcagccccacaaaccagcttcacccatctatgttctttgtt
caccccttcataacaaaggtcaatgtttccagcctggagcgtccccgatggttgacaatg
acagagcgaagagaccaaggcgaaccgttgctcaagggtggtgcggaagcacagagaccg
aagaagcgatttgaagagcgaacaattatccaggcggcacatggtgacagcaccatccac
atctgggactcgggtcatgcagatgagattgagaatggtgggcaactgcaggttgacgtc
gcgcggaccttggatcggtatgacgatattgatattactgcaatgagcatgtcctccggc
acgggtgattttgccgtaggcacacggacaggagaagcaattgtttacaaatggggtggt
aatcgattctatggacgtgacgtcccccaacaactggatccgaacccaaagggtcttact
gacatcagttcccgtgctgagccgacgctgaaggagggccttcagccgtatattttgtac
gaaatgatgcaaggtccaatcactgcgattcaagcttccaacgtcggatttgtggcagtc
gggtcggaattaggcttcttgacactcatcgatcttcggggcccaaatattttctaccaa
gctcctatgacagactttgccaagcaagacaagaggagctccttcttcaagagagagcac
catcaccgcgcaaaggacgagccccaaaaggaatggcccgttgttattgaatttggagtc
atgacattggatgaggataagtattcaagcatttgttgcttcgtcggaactaacttgggg
aaagtcattacattcaagctgcttcctgctgctggcggcgcttacacggcgcagctagct
ggcgttgttgtttttgatggggcagttatttccctatctcctattaatgctcaaaccgga
aagccagcattggctacgggttccatagttggctccctacgtgaaggcaagcaggtggac
ggggctttggtagcagttaccgaaaaggagatgagagtattcaggcctgcaacttcaaag
ggcgcctcccgagaattcgatgacatactatgccgtgcagcatccgttgcggaactcgag
cttcaagggttcgccgtcgtggcactattagccgaccaaagtgtgcgtgcatactctatt
ccaggattgaaggatcttggaaaagcagaattgccaatgatagatccaaccatgagcaaa
ttatcggttgtaacgcaaacgggcgacatctttgcctggacggggccgagtgaaatgagc
gtgattcatgtctgggggagtggcaagccgctccagcaatcgccagacatcatgatcaat
ccagacctacaatgccctccacgaccaacaatctcgaatgtgcaatggatctctggtact
caatatgtttcaccgttggacctagatgtccttgtcggtggcccagacagacctccgagc
aagagaatgctggacgctgcggctgcagagcgacgtgcaacagcaggagggacagctgcc
gtagcaggtggagtagcagcgagccaagagacttgggggtcatacctgagccgtcaggtc
aatgagaggacggaaaagttgacgtttctcaatagcggcgtagacaccctgcaagaccag
agccaggcgtgggcagacgatatcaacaagtttgtcaatcagcaaaagcggaatttggtt
atgggaagtatcaagagtaaatttttctga
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