Pochonia chlamydosporia: VFPPC_08138
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Entry
VFPPC_08138 CDS
T09407
Name
(RefSeq) pre-rRNA processing protein Utp22
KO
K14544
U3 small nucleolar RNA-associated protein 22
Organism
pchm
Pochonia chlamydosporia
Pathway
pchm03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pchm00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
VFPPC_08138
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pchm03009
]
VFPPC_08138
Ribosome biogenesis [BR:
pchm03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
VFPPC_08138
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nrap_D4
Nrap_D5
Nrap_D2
Nrap_D3
Nrap
Nrap_D6
ATP-synt_E_2
Motif
Other DBs
NCBI-GeneID:
28850890
NCBI-ProteinID:
XP_018143691
UniProt:
A0A179FM23
LinkDB
All DBs
Position
4:2338839..2342247
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AA seq
1116 aa
AA seq
DB search
MALDSGAKRRKIDHGGSSLRHDGLIDFKSRNATRVSSASTFVLQTEELLKEAKMDYGKTL
KDADSQLFRLKTVVDAIEPHEPLPIADATSKFEKQHCITVPYPDPKPPKDSPYKLSYAKP
AQCNVVGSYVSRTMVKSQAVLGIDMVAQMPASLFQDKDYLSMRYFYRRAYFIAYIAAQVR
KEMGNAATLTFEFLNENPLLPVLVLQPLPEAAEAADTTSAKKADPNVAKKNKKNSGYFIR
LIPCAPDNLFPWSKLTPSANCTRLGETKEKKGSSSTSPFYNSTLNAERTFIQYLRVLTLA
KNECPAFPDACVLGRIWLQQRGFGGSISQGGFGHFEWATMIALLLQMGGRNGQPALSSSL
SSTELFKAGIQFLSTTDFNKRPFTFNSATVDAKLIREAGPVMFDPVRELNILSKMTPWSA
SLLRLHAKSTSDLLADERAEKFEPTFITKTDVTFQVYDAVFQITKSDFAKYVDSADRSSI
SWKFAFDVQKILKKAFGNRAQLVHIELPSVNPWQLASPAAKPATELLVGVIFDPAHMSRQ
MEYGPPAEEEKEAAVFRQFWGEKAELRRFKDGSIRECVEWNGKSPFQVCEEITTYCLKEH
LKVAKEDITAHGNGFSSLIGLSHMDKEAFDSARRAFTTFENDIRGLDDLPLQIRQLSPVS
PSARYSSLEPPMLGFHKDNVEPMEVNLYFEASSKWPENLTAIQEAKVDFLLDFDRRLTAA
NDKLTTYLGRENRDVGIDNLAYLDVVYEGGAAFRLRIYCDLEDTLLQRQVQNKTLDAHVR
EEASEALASLHWHSTTLPLHTQTIATFCTRLQPLSQTIRLVKHWFASHKLCGHFSDELIE
LFVLHVFIQPYPWLMPSSPSTGLLRTLFFLARWDWRDEPLVVDSAETITTEGQSTMRREL
EAWRKRDPHMNHPVLFVATSNDQSGLGYTRGGPSKLIASRMTRLAKAACKLVRDQGLHLV
PNSLFESSLQDYDVLIHLSTKTIKHILAEAATEFGAKKQSQYKNLNARTGKMPLPIRAHP
STVLAQELQRAYGDTFVFFSGGPEESVLAAIWNPKLQKKQKFRAGLPYNFRKVEAGNDAD
DSAPDMVDVNRQSILLEIARTGGDMIKKIEVGEDEE
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atggccttggactcgggggccaagcgccgtaagattgatcatggcggctcgagtctccga
cacgatggtctcattgatttcaagtcacgaaatgctacccgcgtgtcatccgccagcacc
ttcgtgcttcaaaccgaagaactactcaaggaggccaagatggactatggcaagacactt
aaagacgccgatagccaattgtttcgattgaagaccgtcgtggatgcgattgagccacat
gagcctctcccgattgccgacgcgacgtcgaaattcgagaaacaacattgcattactgtg
ccatacccagacccaaagcctcccaaagattctccatacaaattatcatacgctaagcct
gcacaatgcaatgtcgtcggcagttacgtttcgaggacgatggtcaagtctcaagccgtt
ctgggtattgacatggttgctcaaatgcctgcctcgcttttccaagacaaagactatcta
agcatgcgatatttttaccgtagagcctacttcatcgcttacatcgctgctcaagttcgc
aaggagatggggaatgctgcgacactgactttcgaatttctcaacgaaaatccccttctc
ccggtactggttctccagccgttgcctgaggcggccgaggcggcagacacaaccagtgcc
aagaaagcagatccgaacgttgcgaagaagaacaaaaagaactccggctacttcatccgc
ttaattccatgcgcgccggacaatctcttcccttggtcgaaacttacgccgtccgcaaat
tgcactcgcttgggagagaccaaggaaaagaaaggaagcagctcgacctccccattctac
aattcgactcttaatgccgagagaacctttattcagtacctcagagttttaacattggcg
aagaacgaatgtccagccttcccggacgcatgtgttttgggcagaatatggctgcagcag
cgcggctttggcgggtctatatctcaaggcggatttggccatttcgaatgggcgacgatg
atagctcttttgctgcagatgggcggaagaaatgggcaacctgctttgtctagctcctta
agcagtacagagctgttcaaggccggcatacaatttctgtcaacaacagatttcaataag
cggccatttacattcaattcggccactgtcgatgccaaactaatccgagaagctggtcca
gtcatgtttgatcccgtacgggagctgaatattctgtcaaagatgacaccgtggtccgct
agccttctgcgacttcatgcgaaatcgacatcagatcttctagctgatgagagggctgaa
aagttcgagcctacattcatcaccaagaccgatgtcacgttccaagtctacgatgccgta
ttccagatcaccaagtctgattttgccaaatatgtagattccgctgatcgcagcagcatc
tcctggaaattcgcatttgatgtgcagaaaatactcaagaaagcctttgggaatcgtgca
caactagttcacatagagcttccatcagtgaacccatggcaacttgccagcccagccgcg
aagcccgctacagagcttcttgttggggtcatctttgacccagctcatatgtctcggcaa
atggagtatggtccacccgcggaggaagaaaaggaggctgctgttttcagacaattttgg
ggcgaaaaagccgagctgaggcgctttaaagatggaagcattcgtgaatgcgtcgagtgg
aatggcaagtcacctttccaagtttgtgaggaaatcactacctactgtttaaaggagcac
ttgaaagtagcaaaggaagacataactgcgcatggaaacgggttcagctccctgattggc
ctttctcacatggacaaagaggccttcgactcagctaggagagcatttacgacgtttgaa
aacgacattcgaggtttggacgaccttcctcttcagattcgccagttatcaccagtctca
ccatctgctcgctactcgtccttggagccaccaatgcttggatttcacaaggacaatgtt
gagccgatggaagtcaacttgtacttcgaagcatccagcaaatggccagaaaatcttacg
gcgattcaagaagcaaaggtggatttccttcttgactttgaccggcgtttaacagctgcc
aatgacaagctcacaacatatcttggtcgtgaaaacagagacgtcggcattgacaatttg
gcatatttggatgttgtgtatgaaggcggtgcagccttccgcctgaggatatactgcgac
ctggaagacactttgctccagcgccaagtccaaaacaagacgcttgatgcccatgtgcgc
gaagaagcctcagaggctctcgcttcacttcactggcattctaccacactacccttgcat
actcaaaccatcgcaacgttttgtactcgcctgcagcccttgtcacaaactattcgcctg
gttaagcattggtttgccagccataaactttgtggacacttctcggatgaactcattgag
ctgttcgtcctgcatgtcttcattcagccatatccatggctaatgccgtcgtctccttca
acgggacttttacgcactctatttttcttggcaaggtgggattggcgggacgaaccattg
gttgtagattctgctgaaaccattacaacggagggccagtccacgatgcgacgagaactc
gaagcttggaggaagcgagaccctcacatgaaccatcctgttctgtttgtggccacgtct
aatgatcagtcagggctgggctatactagaggcggaccatcgaagctcatcgcatcacgg
atgactcgcctggccaaggcggcatgtaaactcgttcgcgatcaaggattacatctcgtg
ccgaatagtctttttgagtcgtcactccaagactacgacgttctgatccatctctcaacc
aagactatcaagcacatcttggccgaggcagccacagaatttggcgcaaagaagcaatca
caatacaagaatctcaatgcccgcactggcaagatgcccctacccatcagagcacacccg
tctaccgtccttgcccaagaattgcaacgagcctatggcgacactttcgttttcttctca
ggtggaccagaagagtccgtcttggcggccatttggaacccgaaactgcaaaagaaacaa
aagtttagagctggactaccgtataacttccgaaaggttgaggcgggcaatgatgctgat
gattcggcccctgacatggttgacgtaaatcgacaatctatcctactggagatagcaaga
acaggcggtgatatgatcaagaagattgaagttggggaggatgaggaatag
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