KEGG   Pochonia chlamydosporia: VFPPC_08187
Entry
VFPPC_08187       CDS       T09407                                 
Name
(RefSeq) nucleolar essential protein 1
  KO
K14568  rRNA small subunit pseudouridine methyltransferase Nep1 [EC:2.1.1.260]
Organism
pchm  Pochonia chlamydosporia
Pathway
pchm03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:pchm00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    VFPPC_08187
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pchm03009]
    VFPPC_08187
Enzymes [BR:pchm01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.260  rRNA small subunit pseudouridine methyltransferase Nep1
     VFPPC_08187
Ribosome biogenesis [BR:pchm03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    VFPPC_08187
SSDB
Motif
Pfam: EMG1
Other DBs
NCBI-GeneID: 28850931
NCBI-ProteinID: XP_018143742
UniProt: A0A179FLZ5
LinkDB
Position
4:2496830..2497797
AA seq 261 aa
MSSPDRRTGVKRPRTQSLPPPALPQLVAEQHTAIPPTDKDSQRLIVVLSNASLETYKAAH
GSSSRTGVHREDKYSLLNSDEHIGVMRKMNRDISDARPDITHQCLLTLLDSPINKAGKLQ
IYIHTAKGVLIEVSPSVRIPRTFKRFAGLMVQLLHRLSIRSTNSNEKLLRVIQNPITDHL
PPNCRKVTLSFDAPLVRVREYMETIGPKESICVFVGAMAKGSDTFADSIVDEKISISNYS
LSASVACSKFCHAAEDVWDVL
NT seq 786 nt   +upstreamnt  +downstreamnt
atgtcatcaccagatcgtcgcactggggtgaagcgaccaagaacgcagtctttacctcct
ccggcgcttcctcaattggtcgcggagcaacatactgccattccaccaacagataaagac
tctcagcgactgattgttgtgctatcaaatgccagcctcgagacttataaggctgcccat
gggagcagcagtagaaccggcgttcatcgtgaggacaagtattcattgcttaatagcgac
gagcatattggtgtcatgcgcaagatgaaccgtgatatcagtgatgctcgcccagacatc
acacaccagtgtctcttgactttactagattcaccaatcaacaaggccggcaaactgcag
atctacattcatacagcaaagggcgtcttgattgaagtatctccttcggtccgaatccct
agaaccttcaagcgatttgctggtctcatggttcaactacttcaccgcttgtcaattcgg
tctacgaactcgaacgagaaattgcttcgcgtgattcagaacccaatcactgaccacttg
cccccaaattgtcgcaaagtgacccttagctttgatgctcccctagtgcgcgtccgggag
tacatggaaacaattggtcccaaggagagcatctgcgtgtttgtaggggccatggcaaag
ggttctgacacatttgccgactcgatcgtggatgagaaaatatccattagcaactactca
ctgtctgccagtgtggcttgcagcaaattttgtcacgcagccgaggatgtgtgggatgtt
ctttga

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