Pochonia chlamydosporia: VFPPC_08200
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Entry
VFPPC_08200 CDS
T09407
Name
(RefSeq) DNA repair and recombination protein RAD54
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
pchm
Pochonia chlamydosporia
Pathway
pchm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pchm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
VFPPC_08200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pchm03400
]
VFPPC_08200
DNA repair and recombination proteins [BR:
pchm03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
VFPPC_08200
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GFIT
Motif
Pfam:
SNF2-rel_dom
Rad54_N
Helicase_C
ResIII
DEAD
HDA2-3
SWI2_SNF2
Motif
Other DBs
NCBI-GeneID:
28850943
NCBI-ProteinID:
XP_018143758
UniProt:
A0A179FNF0
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Position
4:complement(2543752..2546228)
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AA seq
806 aa
AA seq
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MAPKLSPPSVPTDNRSHPNFKRRASAALGALHKPFKCPGTASTGTSSLERPSRKRKRVDY
SGADGDAPKDGFYTNGDRLALATRDVNRFPVYKPKEKHVVFSKAFSVPLKDKSSSSYNPN
RPPPTLGLRQGAVVSPKPLHDPSGEFAIVLYDPTIDAKLDIRRQAQMPSTSEIPQKPQLD
APLVHKSLAEILGIRKKVSSEESKVPVVLDPKLAKILRPHQVEGVKFMYRCVTGMIEEKA
NGCIMADEMGLGKTLQCITLMWTLLKQSPEAGKPTIQKAIVVCPASLVKNWANELTKWLG
PNAITPFAIDGKASKEELTRQLRQWAIASGRSVTRPVIIVSYETLRLNVEELKHTKIGLL
FCDEGHRLKNGDSNTFSALNSLNVSRRVILTGTPIQNDLTEYFSLTSFANPGLLGSRLEF
RKRFEIPILRGRDADASESDRQRGDECTSELLGVVNKFLIRRTNDILSKYLPVKYEHVVF
CNAASFQENLYKYFITSPDIQALLRGKGSQPLKAINILKKLCNHPDLLNLSDDLPGSESC
FPAEYVPKESRGRDRDVRPEYSGKMMVLDRMLARIRQDTNDKIVLISNYTSTLDLFERLC
RSRQYGCLRLDGTMNVNKRQKLVDRFNDPNGEEFVFLLSSKAGGCGINLIGANRLVLFDP
DWNPAADQQALARVWRDGQKKDCFVYRFIATGTIEEKIFQRQSHKQSLSSCVVDSAEDVE
RHFSLDSLRELFQYRPNTTSDTHDTFKCKRCRPDGKQHVKAPAILYGDTSTWNHFVNSGL
QAIQDLLLRQEYDLGQVSAVFQYISH
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggcccccaaattatcgccgccgtctgtgccaactgacaatcggagccatccaaacttc
aaacggcgagcttcggcggcccttggcgcactgcacaaacctttcaaatgtcccgggact
gcatctaccggaacttcatcattggaaagaccatcacggaaacgaaaacgagttgattac
tctggggcagatggcgatgctccgaaggacggattctacaccaacggtgatcgactagcg
cttgcaacccgggacgtcaataggtttccagtatacaagccgaaggagaaacacgttgtc
ttcagcaaggcgttctctgtgcctcttaaagacaaaagcagttcatcctacaatccaaac
aggccacctcctacgttgggcttgagacaaggcgcagtagtttctccgaagcccttgcat
gatcccagcggcgaattcgcaatcgtactatacgatccaactatcgatgcaaagcttgac
attaggaggcaagcccaaatgcccagcacatctgagatccctcaaaagccgcaactagac
gccccgcttgtgcacaaaagcttggcagaaattcttggtatcaggaagaaagtcagcagc
gaggagtcgaaagtacccgttgttctagacccaaaacttgccaaaattcttcgaccacat
caagttgaaggtgtcaaattcatgtatcgctgtgtcacgggaatgattgaagagaaggca
aatggttgcattatggcagatgaaatgggactaggtaaaacactgcaatgcatcaccctc
atgtggaccctgctcaaacagtcgcctgaagctggaaagccgacaattcagaaagctatc
gtggtttgcccagcaagcttggtcaaaaattgggctaacgaattgaccaaatggcttggc
ccgaatgccatcacgccatttgctattgatgggaaggcgtcaaaagaagaattgactaga
caactccgacaatgggctatcgcatctggtcggtcagttactagaccggtcatcattgtg
tcgtatgaaaccctaagactgaatgtggaggagctgaagcataccaaaatcggtcttctc
ttttgtgatgaagggcatcggctcaagaatggcgacagcaatacgtttagtgccttgaat
agcctgaatgtttctcggagggttattctaacgggaacgcccattcagaatgatctgacg
gagtacttttctctaacgagtttcgccaacccgggtctcctaggatcgcgcttagagttc
cgaaaacggtttgagatccccattctccgagggcgtgatgcagacgcttccgaatcagat
cgccagcggggagatgaatgcacttcggagcttcttggagtggtcaacaaattcttgatt
cgcagaacgaacgatatcttgtcgaaatatttaccagtcaaatacgagcatgtggtgttt
tgcaatgcggcttcatttcaggagaacctgtacaagtacttcattactagccccgacatc
caagctttgctccgaggaaagggaagtcagcccctgaaagccattaacatcttgaagaaa
ctatgcaatcatccggatctgcttaatttgagcgatgatctccccggatctgaaagctgt
ttccctgccgagtacgtaccgaaggagtcccgtggccgagatcgtgatgtgcggccggaa
tactcggggaaaatgatggtgttggatagaatgctcgcgcgaatacgccaagatacgaat
gacaaaatcgtgcttataagcaactatacgtcgacattagacctttttgagcgtctatgc
cgatcccgacagtacggatgtctcagacttgacggcacaatgaatgtgaacaagcgccag
aagcttgtggatcgcttcaacgacccaaacggcgaggaatttgttttcttgctcagcagc
aaggcaggcgggtgtggcatcaatctgattggtgccaaccgcttggttctcttcgatcct
gactggaacccggcggctgaccaacaagcgttggctcgagtctggcgtgatggccaaaag
aaagactgcttcgtatatcgattcatcgcaactggtaccattgaggagaagatttttcaa
cgtcaatcgcataagcaaagtctgtcgtcttgcgttgttgactcggcggaggatgttgaa
agacatttctccttggacagcctcagagagttattccagtatcgacccaacaccacgagt
gatacacatgacacattcaaatgcaagagatgcaggccagatggtaaacaacatgtgaag
gctccagcaattctttacggagatacaagcacatggaatcacttcgtaaacagtgggctg
caggcaattcaggacctgttattgagacaggagtatgacttaggacaggtttcagcggtt
ttccagtatatatcgcactag
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