Pochonia chlamydosporia: VFPPC_08257
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Entry
VFPPC_08257 CDS
T09407
Name
(RefSeq) SAS complex, SAS5 subunit/transcription initiation factor IID, subunit 14
KO
K03140
transcription initiation factor TFIID/TFIIF subunit
Organism
pchm
Pochonia chlamydosporia
Pathway
pchm03022
Basal transcription factors
pchm03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pchm00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
VFPPC_08257
09126 Chromosome
03082 ATP-dependent chromatin remodeling
VFPPC_08257
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pchm03021
]
VFPPC_08257
03036 Chromosome and associated proteins [BR:
pchm03036
]
VFPPC_08257
Transcription machinery [BR:
pchm03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
VFPPC_08257
Coactivators
SWI/SNF complex
VFPPC_08257
Chromosome and associated proteins [BR:
pchm03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NuA3 complex
VFPPC_08257
Chromatin remodeling factors
INO80 complex (yeast)
VFPPC_08257
SWI/SNF complex
VFPPC_08257
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YEATS
pYEATS
BET
Motif
Other DBs
NCBI-GeneID:
28850988
NCBI-ProteinID:
XP_018143822
UniProt:
A0A179FM74
LinkDB
All DBs
Position
4:complement(2777361..2778562)
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AA seq
234 aa
AA seq
DB search
MPPRTRKNANDLKRKVKVVTEQHVIDKPSPVEEFPMREWSLKLHLLDEEGNERPADVFTK
VVYNLHPTFENPTQTFTKPPFLCSNEGWGEFEISIDCYTTEKTKLAPIIHDLNFLQERYE
ATHTVTFKNPSQALQERLRETGPLPNDDERQKKKSVASKKGGQKYDYEKIAEALEKLDEE
DLLRVIQLINENKGPDTYIRSDVEAGEFSIDLYTMPDLLTTKLWEHLSKKGLVN
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgccgcctcggacgaggaagaatgctaacgatttgaagaggaaagttaaggtcgtcacc
gaacaacatgtcattgacaagccttctccagtggaggagtttcctatgagagaatggagt
ctgaaattgcacctgttggacgaagaaggcaacgagcgacctgccgacgtgtttaccaag
gtcgtctacaacttgcacccgacctttgagaatcccacccaaacctttaccaaaccccca
ttcctctgtagcaacgaagggtggggtgagtttgaaataagcatcgattgctacacgact
gagaagacgaaactggctcctattatccacgacttgaacttcctgcaggagaggtacgag
gccacacacacagtgaccttcaagaacccatcgcaagctttgcaggaaagattgcgcgaa
actggcccgctacccaacgacgatgagcgccaaaagaagaagagcgtcgcaagcaagaag
ggcggtcaaaaatacgactatgagaagattgctgaggcactggaaaagctcgacgaggag
gatttgctgcgcgtcattcagctcattaatgagaacaagggaccggatacctacatacgg
agtgatgttgaagccggagagttttctattgacttgtatacaatgccggatttgctgaca
acaaaattgtgggaacatctgtcaaagaagggactggttaattaa
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