Pochonia chlamydosporia: VFPPC_08405
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Entry
VFPPC_08405 CDS
T09407
Name
(RefSeq) golgi complex component (Vps8)
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
pchm
Pochonia chlamydosporia
Pathway
pchm04138
Autophagy - yeast
pchm04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pchm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04138 Autophagy - yeast
VFPPC_08405
04148 Efferocytosis
VFPPC_08405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pchm04131
]
VFPPC_08405
Membrane trafficking [BR:
pchm04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
VFPPC_08405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
TPR_VPS8_2
VPS8_N
TPR_Vps41
zf-RING_Vps41
zf_RING_Vps8_fungal
Beta-prop_EML
Beta-prop_HPS5
zf-RING_5
zf_RING_Vps8
zf-RING_UBOX
PHD_NSD
zf-RING_2
zf-C3HC4
zf-RING_11
WD40_CDC20-Fz
zf-rbx1
zf-C3H2C3
Motif
Other DBs
NCBI-GeneID:
28851116
NCBI-ProteinID:
XP_018143998
UniProt:
A0A179FP51
LinkDB
All DBs
Position
4:3303882..3308705
Genome browser
AA seq
1568 aa
AA seq
DB search
MSDTEDASPLGDNAPSGEQQITSGQDVDSDIPHLEEQEMEAGSELQDASHRRDLLEKEAN
ASEVSSIDASLVDSLPRRAGSPVGSLASGRGEDSIQGSYMSSPGSSVLPSVASRAGLSSP
SPSFRPFDRRFQSRISSSSSTTPRASSPAFLNTHSRNVSLSSNFFIEQNETDTPSPPWEV
VRWTRLKKMNGQAFSEAGRRNFGSPTCLAVSASIVLGTSKGIILIFDFNQNLKMIIGPGT
KAIESGPITAIAISADHTTVAGGHANGNIFTWDTGRASRPFLTIPHLDEAQAENRTADGH
VPNAAVVHLGFLGTRHTALVSADDRGMAFSHLATRGTGALGRTVKTTRILGRYPNAPPPS
GKSIKPSTVLAFAPLPLGNVEKATDGMGLTAMLTPYLLVIVSTTPIAQTQHKSARPKDVP
AHSAMTGCLAWFPAVKLKTPDAHTGSDVSKVKLVYCWSNVLTVLDVDEIYGEDADQPPSL
RFKARSRWKCEEAIAAVQWLSRSVLAVLTISQRLIILEDRSMRMTEAFDLLQKHIYHKDL
FSKQLHTLVEQLDEEDVTMHGVVADAFYMSFKAYKGRMFLLGFNEVSIGALSNWADRLIA
MMENGDYIGAIKLATSYYTGDADKLTVGLPEDGTVRHAMVQDKIMEIMSASLKYVFTQRQ
KRGKYDDDADHLRELAETCFVACQAIEASDFLFEDMYEWYSEAEVEGLFLETLEPYILDE
TITIVPPVVVKDMVAHYVAKGWESRLEEMICHMQTATLDLDQITLLCKQHSLYDALTYVW
NQALNDYITPMIDLLSLLVPLLTNGTTTGGTTEDDYFSVNALKIFPYLSYTLTGRIYPNG
EWLSEETADKAKAEIYWFFFSGKTVEWPKGSKKEFITRPGDESEPAFPYLRMVLKFDAPS
FLSALNEAFEDTFLNDSPEKQVNGGSRMDMPEEQIFGMTINRQYVVSILLDVMNPNEFAP
EDTIYLDMFIARNLPKFQQYLLFSGSTLSKVLTGLCHYPGEDLAEDAQLSAEYLLSVYQP
SDMPSFLPLFKKAGFYRILKRVFRLEGHYGMLIATYFEDPENQESVFECIADCLRPQKGL
DNRQLEDVQRVIKQHARDLLEINPEQTAQTLVAQSIKVHQHMVNSASDDEGLQYAYLKAL
IEPGHATEDDAGPNDQELTERYVQLMCKFSPSHVSDFVESMRSADLRLEKLLPTMEETGV
VDAAVVLMARDGQVSQAMDRLIKHLFSLESALRGLLTETISSTEGADVESSTVEILEHLQ
KYVHVGIWLCQGQTKSSKKVNIVKKGKALAKDSLSPDESLWLGLIDACVQITKRLSPIIS
EQVQGSVLEDDQALTLLRSLVQHTFTSLLTATSSQSQVQSGSNLLSNAGNNLSFLRILRA
FLTKAAASSPNLADLRGVLASIFAAYAYEESILRLSNRLLERNLFVNVNQSVQLRQRGWR
PRGSTCEACSRRVWGPGVAGGSVFEAWEDRQAVEDEVRKQRKLRVAERAKGKAGESDGRD
KGKSLDVRPSSMLIESDAALAGKEAPLGPLVVLACRHIYHQSCLDSLQEKQENGVIGRER
EYKCPIDG
NT seq
4707 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatacagaagacgcgtctccccttggagacaatgctcccagcggcgagcagcaa
ataacatctggtcaggatgtggactccgacatccctcatcttgaggagcaggagatggaa
gctggcagcgagctacaagatgctagccaccgccgtgatttgctggagaaggaagcaaat
gcttccgaagtaagctcaattgatgcgagcttggtggactcgctcccaaggcgagctggt
agtccggtgggctcgcttgcctcaggtcggggagaagattcaatccagggctcgtacatg
tcgtctccaggcagtagtgttttgccctcggttgcatcacgagctggcttgagcagccca
tcaccatcgttcagaccattcgatcgtcggttccaatcccgcatatcttcatcctcgtcc
accacaccccgtgcgtcgtcgcccgcttttctcaacacccatagtcgaaacgtctctctt
agctccaacttcttcattgaacaaaatgagactgatacaccgtcacctccatgggaagtc
gtaagatggaccaggttgaagaaaatgaatggccaggccttttctgaggctggccgtagg
aatttcggatccccaacctgtctggcggtttcagcatctattgttttggggacttcaaag
ggtataatattaatatttgattttaatcaaaatctcaaaatgataattggaccaggaacg
aaagcaatcgagtccggtccaatcactgctattgctatatcggcagatcacacaaccgtt
gccggggggcatgccaatgggaacatctttacttgggacactggcagagcttcgcgacca
tttctcacgattccgcatttggatgaagcacaagcagaaaaccggacagcagatggacat
gttcctaatgcagctgtggtgcatctcgggtttctgggtacgcgacacacagccctcgtg
tcagcagatgaccgcggaatggccttctcgcacctcgcaactcgaggcactggggcgctg
ggtcgaaccgtgaaaaccacacgaattctgggccgatatccaaatgcgcctcctccttca
gggaaatccatcaaaccaagcactgtgctcgcttttgccccgttaccactgggaaatgtc
gaaaaggcgacagacggcatgggactcacagcaatgcttacgccttacctgcttgtgatt
gtttctaccacccctattgcccagacgcaacacaagtcagcccggccaaaggatgtccca
gcacatagcgcaatgactggctgtttagcctggtttcctgctgtcaagttgaaaactccg
gatgcacacaccggaagtgatgtgtccaaggtcaagcttgtgtactgttggtcaaatgtc
ctgaccgtccttgatgtggatgaaatttacggggaggatgcagatcaacctccttctctc
agattcaaagcacgaagcagatggaagtgtgaagaggctatcgcagcggtgcagtggcta
agtcgatctgttcttgcagtcctgactatttctcagcgtcttatcatcttggaggaccga
agcatgcggatgactgaggcattcgacttgttgcagaaacatatataccataaagacctc
ttctcgaaacaacttcacactcttgtggaacagctagatgaagaagatgtgacaatgcac
ggagttgtggctgatgccttctacatgagcttcaaagcctacaagggtaggatgttcttg
ctcggcttcaatgaggtttccataggagcactctcaaactgggcagatcgccttattgct
atgatggaaaacggagattacattggcgcgataaagctagctacttcatactatacggga
gatgccgataaactcaccgttggccttccagaggacgggactgtgcgtcatgcaatggtc
caagacaagatcatggagatcatgtcagcgtccttgaaatatgtttttactcagcgacag
aaacggggcaaatatgatgacgacgccgaccatttgagagaacttgcagagacctgcttc
gtggcctgtcaggctattgaagcatccgattttctgtttgaagatatgtacgaatggtat
agcgaagctgaagtcgagggtttgtttttggagacccttgagccttatatcttggacgaa
acaattacaatcgtgccaccagtggttgttaaggatatggtcgctcattatgtggcgaag
gggtgggaaagccgactcgaggagatgatatgccatatgcaaacagcaacattggatctc
gatcaaatcacgttgttgtgcaagcaacacagcttgtacgatgccctgacatatgtgtgg
aatcaggcgctgaatgactacatcaccccaatgatcgatctgctgagcctcttggtccca
ttgttgacaaatggaacaaccacgggtggcacaaccgaggacgattacttcagtgtcaat
gccctgaaaatattcccgtatctctcatataccttgacaggaagaatatatcccaatgga
gaatggttaagtgaagaaacggcggacaaagccaaggcagagatttactggtttttcttc
tctggcaagacagtggagtggcccaagggaagcaagaaagaattcatcactcgaccagga
gatgagtcagagcctgcatttccatatctgcgaatggttctcaagtttgatgcgccaagt
tttctaagcgccttaaacgaagcctttgaagacacgtttttgaacgattccccggagaag
caggtcaatggcggatctcgaatggatatgccggaggaacagatattcggcatgacaatc
aatcgtcagtatgtggtatcgattcttctcgatgttatgaatccaaacgaattcgccccc
gaggacaccatctacctcgacatgttcattgcccggaacttgccaaaattccagcagtat
ctcttattttctggctcaactttgtccaaagtccttacaggactttgtcactatcccggt
gaagatcttgcagaggacgctcagctaagcgccgaatacctcctttcagtgtatcaaccg
tcggacatgccatcattcttgccattattcaagaaggcgggcttttaccgaatccttaag
cgcgtgtttcgtcttgagggtcactatggaatgctcatcgcgacatattttgaggaccca
gaaaatcaggagtctgtgtttgaatgcattgcagactgccttcggccgcaaaagggactt
gacaatcgacaactggaagacgtccaacgggttatcaagcaacatgccagagatttgctc
gagataaaccctgaacaaacagcgcaaactctcgttgcacagtccatcaaggttcatcag
cacatggtcaattctgcatctgatgacgaagggttgcaatatgcatatttgaaagccttg
atagaacccggccacgctacggaagatgatgccggtcccaacgaccaagagctcacggag
cgctacgtacaactcatgtgcaagttcagcccgtcgcatgtctcagactttgtggaaagc
atgcgatcagccgatttgcgccttgagaagttgctcccaaccatggaagagactggtgtc
gtagacgctgctgtcgtactcatggcccgcgatggccaagtcagtcaggcaatggatagg
ttgatcaagcacctattttcgctggaatcagcgctgcgaggactcttgacagaaacaatt
agttccacagagggagcagatgtggaatcgtcaaccgtagaaatacttgagcatttgcaa
aaatacgtccacgtcggcatttggctatgtcagggccagacaaagtcgtccaagaaggtg
aacattgtgaagaagggaaaggcacttgcaaaggacagcctgtctccagatgaatccctg
tggctgggattgattgatgcttgtgtacaaatcacgaagcgattatcacccatcatttca
gaacaagtgcagggctcggttttggaagacgaccaggcattgacgcttcttcgctcactg
gttcaacacacattcacttcccttctcacagctacctctagccagagccaggtgcaatct
gggtcgaatttgctgtcaaacgcgggaaacaacctgtcatttttgaggattttaagggca
ttcctcaccaaagcggcggcctcgtcaccaaatttggcagatcttcgaggagtattggcc
tcaatatttgcggcgtatgcctatgaggagtccattttgcgactgtcaaaccggctcctg
gaaaggaatttgtttgtaaatgtaaatcaatcggtacaattaaggcagcgtggatggcga
ccacgtggctcaacatgcgaggcatgcagccggcgagtttggggtcctggtgtagcaggt
ggctccgtatttgaggcatgggaagacaggcaagcagtggaagatgaagtacgaaagcag
aggaaactccgtgttgcagagagggccaagggcaaggcgggcgagtcggatggccgggac
aagggaaagagtctcgacgtccgaccatcgagcatgctcattgaatcagacgcagctctg
gctggcaaagaagcacctctcgggccacttgtggttctggcttgtcgacatatatatcac
cagagctgtctcgactcgttgcaggaaaagcaggagaatggggttattggacgggaacgc
gaatacaagtgtcccattgacggttaa
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