Pochonia chlamydosporia: VFPPC_08413
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Entry
VFPPC_08413 CDS
T09407
Name
(RefSeq) GARP complex subunit Vps53
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
pchm
Pochonia chlamydosporia
Brite
KEGG Orthology (KO) [BR:
pchm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pchm04131
]
VFPPC_08413
Membrane trafficking [BR:
pchm04131
]
Protein recycling
Others
EARP complex
VFPPC_08413
Endosome - Golgi transport
Tethering complex
GARP complex
VFPPC_08413
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
Vps54_N
Syndetin_C
COG4_N
DUF1664
DUF3450
Motif
Other DBs
NCBI-GeneID:
33936309
NCBI-ProteinID:
XP_022284408
UniProt:
A0A179FNW4
LinkDB
All DBs
Position
4:complement(3334211..3336798)
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AA seq
818 aa
AA seq
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MSGSSALDEVDYDPMEHLNMLFSHPSTVSSISQVSQSLKAHQNVLSSEINSLELEQAYKP
DSSLERMQSAQTELAQLFRKIETVRSRAIETEQNITSMTAEIKRLDGTKRNLTLSMTALK
RLQMLTTAYEQLRGLAKTRQYRECAGLLQAVIQLMKHFNSYRSIEQIATLSREVSELQRE
LLEQVCEDFEMAFAKGEVTTKRNMLVEACLVMDALGDSAKSRIITWYVNTELREYRQVFR
GNDEAGSLDNIGRRYAWFKRMMKSHDDERSTIFPSHWHVGELLATAYCDGTRDDFKGILE
RSMRRGDGNKLDVNLLLSCLQETLDFEQSLEKRFSDAPRASIDTLSSAEEKTHTFNGLIS
VAFEPYLSLWVDSQDRQLSSMIPKYRSQPLIPQDEEFSPQAVMRSAIELFHFYKLTLSQC
AKLSTSDRLLDLSKVFSKYLDEYAQQVLLHILQAGGPQGPSVQDVILVLNTADFWHINTN
QLEESIKKRIDNELVSKVDLSSQSDAFLGVASAAVLALVHLVELECESIWREMKNTNWST
MDSAGDQSTYVGELVKHVNSKTEEVLGIVGKQQYARAFCDNLVEHLATSYVNNIVQCRPI
SEVGAQQMLVDKYALTKSFGNLLSYHNPSSSANQAPPSSFVRRVEHSMNRMDPLLKTLQV
RSSPPEGLVQAYLIHIGDRSDTNFKKILELKGIRKLDQSHLIELFGIHRDGSSNEKLVQN
SPLLTPLMTSASASASASSGISGMNPSAALTAASGARFDAGFLGEKLLSAARDIGNTTQG
AEKATINENLRNFGKFFKRDIGGLGVRFGKGSAEDGGR
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atgtctgggtcttccgctctggacgaggtcgactacgacccaatggagcatttgaatatg
ctgttctcccatccgtcgacggtatcatcgataagtcaagtctcacaaagcctaaaagca
catcaaaatgtgctatcgagcgaaatcaatagcctcgaactcgagcaagcctacaagcca
gactctagcctggagaggatgcaatccgcacagacagagctggcgcagctctttcgaaaa
atcgagactgtacgatcgcgggcgattgagacggaacaaaacattacgtcaatgacggcg
gaaatcaagcggctggatggcacgaagcgcaacctgacgcttagcatgacggctctgaag
cgtttgcagatgctcacgactgcgtacgaacaattgcggggtctggccaagacacggcag
tatcgagagtgcgcgggccttttgcaggctgtgattcagctgatgaagcacttcaacagt
tacagaagcatagagcaaatcgcgacgctgagtagggaagtctcggagcttcagagggag
ctactcgagcaggtttgtgaagactttgagatggcttttgccaagggagaggtgacgacg
aaacgaaacatgcttgttgaagcatgtttggtcatggatgcgttgggagactcagccaag
tcgagaatcattacttggtatgtcaacacggagctgagggagtatcgacaagtattccgg
ggcaatgacgaggctgggagcttggataacattggacggagatacgcgtggttcaagcgt
atgatgaagtcgcacgacgatgagcgctctaccatcttcccgtcccattggcatgtgggt
gagttgctagccacggcatattgtgacggcacgcgagatgacttcaaggggattctggag
aggagcatgcgccgtggagatggaaacaaacttgatgtcaatttgctgttgagctgtttg
caagagacgctggactttgagcagagtcttgagaagaggttctcagacgcaccgagggct
agtattgacaccctgagttcggcagaggagaagacgcacacatttaatgggctcatctcg
gttgcttttgagccgtacctgagtttatgggttgactcgcaggacaggcagctgtcctcc
atgataccaaagtatcgcagtcagccacttatccctcaggacgaggagttctcaccgcaa
gccgtaatgcggtccgctattgagctcttccacttttacaagctcacattatctcaatgt
gcaaagctatctaccagtgacagactattagatctgtccaaggtcttttccaagtatctc
gacgagtacgcacagcaagttcttttgcatattcttcaagctgggggacctcaaggtcca
tcagtacaggacgtcatcttggtgctcaacacggcggacttttggcacattaatacgaac
caactggaagaaagtatcaagaagcgcattgacaacgagctcgtttcaaaggtggacctc
tcgtctcagtcggacgccttcttgggtgtagcaagtgctgccgtactggcgctggtacat
ctcgtcgagttggaatgtgagagtatctggcgcgagatgaagaacacaaactggagtacc
atggacagtgccggtgaccagagcacatatgtcggcgagttggtgaagcatgtcaactcc
aagacagaggaagtgctgggcatagtgggcaagcaacaatatgcaagggcgttttgtgac
aacttagttgagcacttggccacctcctatgtcaacaacattgtccaatgccggccaatt
tcagaggttggcgcacaacagatgctcgtggacaaatacgctcttaccaaatctttcggc
aacctgctctcctaccacaatccttcttcatcagccaaccaggcacctccttctagcttc
gtccgtcgcgtagaacattccatgaaccgcatggaccctcttctgaaaacgctccaagtc
cgctcttcaccacccgagggcctcgttcaagcttacctcattcacattggcgaccgctcc
gacaccaacttcaaaaagattctcgaactaaagggcattcgcaaactagaccagtctcat
ctcattgaactatttggcatccaccgcgatggcagctccaatgagaaacttgttcaaaac
tcgccattacttactcccctcatgacaagtgcaagcgcaagcgcaagcgcaagcagcggt
ataagtggtatgaatcccagtgcggcattgacggccgcttctggtgcgaggtttgatgcc
gggtttttgggagagaagctgcttagtgcggcgagggatatcggcaacacgacgcagggt
gcggagaaggctactattaatgagaacttgaggaattttggaaagttcttcaagagggat
attggggggttgggtgtgaggtttgggaagggaagtgctgaggatggggggaggtag
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