Pochonia chlamydosporia: VFPPC_08459
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Entry
VFPPC_08459 CDS
T09407
Name
(RefSeq) rab5-like protein ypt5 protein
KO
K07888
Ras-related protein Rab-5B
Organism
pchm
Pochonia chlamydosporia
Pathway
pchm04144
Endocytosis
pchm04145
Phagosome
pchm04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pchm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
VFPPC_08459
04145 Phagosome
VFPPC_08459
04148 Efferocytosis
VFPPC_08459
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pchm04131
]
VFPPC_08459
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pchm04147
]
VFPPC_08459
04031 GTP-binding proteins [BR:
pchm04031
]
VFPPC_08459
Membrane trafficking [BR:
pchm04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
VFPPC_08459
Endosome - Lysosome transport
VFPPC_08459
Exosome [BR:
pchm04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
VFPPC_08459
Exosomal proteins of other body fluids (saliva and urine)
VFPPC_08459
Exosomal proteins of colorectal cancer cells
VFPPC_08459
Exosomal proteins of melanoma cells
VFPPC_08459
GTP-binding proteins [BR:
pchm04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
VFPPC_08459
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
Gtr1_RagA
MMR_HSR1
RsgA_GTPase
AAA_16
Motif
Other DBs
NCBI-GeneID:
28851162
NCBI-ProteinID:
XP_022284410
UniProt:
A0A179FNY0
LinkDB
All DBs
Position
4:complement(<3536176..>3537183)
Genome browser
AA seq
220 aa
AA seq
DB search
MASRGPAGGARGMNNRFAQFKLVLLGESAVGKSSIVLRFVKDQFDSFRESTIGAAFLTQT
ISLDENTTVKFEIWDTAGQERYKSLAPMYYRNANCAVVVYDITQSSSLDKAKAWVKELQR
QANDNIIIALAGNKLDLVTEQPDKRAIPTADAEAYAREAGLLFFETSAKTAENVRELFTA
IAKKLPLDQVGPRHARPGQRPGVSLAPENANTNVSGPCSC
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atggcatctcgaggccctgccggtggcgcccgcggtatgaacaaccgcttcgcccagttc
aagcttgttcttcttggtgaatccgccgtcggaaagagctcaatagtcttgcgatttgtc
aaggatcaattcgactccttcagagaatctaccatcggcgccgctttcctgacacagacc
atctctctcgatgagaacaccacagtcaagttcgaaatctgggataccgccggccaagag
cgctacaagtccctggctcccatgtactatcgcaatgcaaactgcgccgttgtcgtctac
gatattacacaatcctcgtcactggacaaggccaaagcctgggtcaaggaacttcaacgt
caggccaacgataacatcattattgccctcgccggaaacaaactcgacttggtgaccgaa
caacccgataagcgtgccatccccaccgccgatgccgaagcctacgcccgagaggccggt
ctcttgtttttcgaaacgtcggccaagactgccgaaaatgttcgcgagttgttcactgcc
attgccaagaagctccctctagaccaggttggacctcgacatgctcgccctggccagcga
cccggcgtcagtctagctcccgaaaacgcaaacaccaacgttagcgggccatgcagttgt
tag
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integrated database retrieval system