Pochonia chlamydosporia: VFPPC_08776
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Entry
VFPPC_08776 CDS
T09407
Name
(RefSeq) CDK-activating kinase assembly factor MAT1
KO
K10842
CDK-activating kinase assembly factor MAT1
Organism
pchm
Pochonia chlamydosporia
Pathway
pchm03022
Basal transcription factors
pchm03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pchm00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
VFPPC_08776
09124 Replication and repair
03420 Nucleotide excision repair
VFPPC_08776
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pchm03021
]
VFPPC_08776
03400 DNA repair and recombination proteins [BR:
pchm03400
]
VFPPC_08776
Transcription machinery [BR:
pchm03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
VFPPC_08776
DNA repair and recombination proteins [BR:
pchm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
VFPPC_08776
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MAT1
zf-C3HC4_5
zf-C3HC4
zf-RING_2
MRP-S26
zf-C3HC4_2
zf-C3HC4_3
DUF3797
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
28851418
NCBI-ProteinID:
XP_018140421
UniProt:
A0A179FC45
LinkDB
All DBs
Position
6:2607247..2608338
Genome browser
AA seq
363 aa
AA seq
DB search
MSRNGVSVRHASSAGLGAPSDQDETCPVCKTTRYFNRDMEFLINPECYHRMCKTCVERIF
KDGPNQCPYATCHKTLRLRGFKSAFFADLTVEREVDIRRRVAQIFNKVEDDFEDLDAYNK
YLEYVEDLTFKLVSGEPEAKTEAEGELAAWEAQHKAEIERNKKLARESDDARKKRLAAEQ
DAARQRRLQDLREEADEKASAARFREEMLNSLQSAEMGQATETMDKIMLKKRGQQKSFSA
RDTLAGATGGLSIRGLRDKTRGTAEENKPYDPFGGLDLTPSRIDLGGDKLREYHSEWIDV
TRSKNEYLVGGYSADEYISRALYEAFSGLGVFIAEDKVDRGVSTAGARDAAVADGKMDTD
DVF
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgaaacggcgtctcagtgcgccatgcctcatccgctggtctcggcgcaccaagc
gaccaagacgagacatgtcccgtgtgcaagaccacccgctacttcaacagggacatggaa
ttcctgatcaacccagaatgctaccaccggatgtgcaaaacctgtgtcgagcgaatcttc
aaggacggtcccaaccaatgtccctacgcgacgtgccacaagaccctccgcctccgaggc
ttcaagtccgccttcttcgcggacctcaccgtcgagcgagaagtcgacatccgccgccga
gtcgcccaaatcttcaacaaggtagaagatgattttgaggacctggacgcctacaacaaa
tacctagaatacgtagaagacctgaccttcaaactcgtaagcggggagccggaagcaaaa
accgaagcagaaggcgaactagctgcctgggaagcgcagcacaaggccgagatagagcgc
aacaagaaactagcacgagaatcagacgacgcgcggaaaaagcggctcgcggcagaacaa
gacgccgcacgacaacgacggctgcaagacctgagagaggaagctgatgagaaggctagc
gcggcgcggttccgcgaagagatgctcaattcactacaaagcgcagagatggggcaagcc
acggagacgatggacaagatcatgctcaagaagagagggcagcagaagagcttttcggcg
agggatacattggccggtgcgacgggcgggttatccattcgtggtttgcgcgacaagacg
cgtggtacggcggaggagaacaagccctatgatccgtttggggggctggatcttacgcct
agtagaattgatttgggaggcgacaagttacgggagtatcatagcgagtggatcgacgtg
acgcgctctaagaatgagtatcttgtcggtgggtatagtgctgatgagtacatttcgaga
gcgctgtatgaggcgttttcagggctgggcgtgtttattgcagaggataaggttgataga
ggggtttctacagcgggtgcgagggacgccgctgttgcggatgggaagatggacacagat
gatgtgttttag
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