Pochonia chlamydosporia: VFPPC_08853
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Entry
VFPPC_08853 CDS
T09407
Name
(RefSeq) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pchm
Pochonia chlamydosporia
Brite
KEGG Orthology (KO) [BR:
pchm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pchm03400
]
VFPPC_08853
Enzymes [BR:
pchm01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
VFPPC_08853
DNA repair and recombination proteins [BR:
pchm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
VFPPC_08853
Prokaryotic type
VFPPC_08853
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-GeneID:
28851480
NCBI-ProteinID:
XP_018140512
UniProt:
A0A179FBT1
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All DBs
Position
6:2366133..2367944
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AA seq
585 aa
AA seq
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MPPKSSKRKPTSSHSANGKTTKKPRTGLREPHPLAAEAEKHGIVLRKYYPPEMSNDRARA
YNRNEIPRPIEDLASALDETANQRQKVHVKDSVVHWFKADLRCNDNRALALASEKAKEAG
VPLIGIYIVSPQDFEAHLTSPVRVDFILRTLEVLKKDLGKLDIPLHVETVAKRKEIPDRI
LELMEEWGSNHLFANMEYEVDELRREAAMVRDLSENGKSFEVVHDTCVVPPGQLQSGSGN
QYAVYTPWYRSWVAHIHSDLELLELFDPPNRNPGAARKQFGKLFDTPVPEAPSNKQLTDE
ERKRFRSVWPAGEHAARERLEKFCEEKIGGYSNKRNIPADDGTSSLSVHLAGGTISSRTC
VRTARDRNKTKRLDGGNEGIRVWISEVAWRDFYKHVLVNWPYVCMNKPFKPEYSNITWSY
DEDHFKAWCEGRTGFPIVDAAMRQLNQLGYMHNRCRMIVASFLSKDLLIDWRKGERYFME
HLIDGDFASNNGGWGFSASVGVDPQPYFRIFNPLLQSEKFDPDGEYIRKWVPELKDLNNK
EIHEPYGRGADAKAKKKGYPKPIVKHKDCRDRALNAYKEGIANGM
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgcctcctaaatcgtcgaaacgcaagccgaccagcagccacagtgcaaacggcaaaacc
accaagaagcccagaaccggtcttcgtgagccacatcctctggctgcggaggctgaaaag
cacggaattgtgcttcgaaaatattacccccctgagatgagcaatgaccgagctcgcgca
tacaataggaacgagattccacgtccaatcgaggaccttgcttccgcgctggatgagacc
gctaatcaacgccaaaaggttcatgtcaaggattccgtggtccattggttcaaggcggat
ctgcgttgcaacgacaatagagcccttgcacttgctagcgaaaaggcaaaggaagctggt
gtgcctttaatcggcatttacatcgtcagcccacaagactttgaagctcacctgacttcc
ccggtgcgagtagactttatactaagaacactagaggttctcaagaaagatttgggcaag
ctggacattccactccatgttgagacggtggcgaaaaggaaagagatccctgacagaatc
ttggaattgatggaggagtgggggagcaaccacttgtttgcaaatatggaatacgaggtg
gatgagctacgccgagaagctgccatggtccgcgacctttcagagaatggcaaatccttt
gaggtcgttcatgacacttgcgtcgtgcctccggggcaactgcaaagtggctctggtaac
cagtatgccgtctacactccatggtatcgatcctgggtagcccatatccattcggatttg
gagctccttgagctctttgatccaccgaatagaaatccaggagcagcgaggaaacagttt
ggcaaattattcgataccccggttccagaagcgccatcaaacaagcaacttaccgatgag
gaaaggaagaggtttcgttctgtctggccagccggtgagcacgctgccagggagagactg
gaaaagttttgcgaagaaaagattggtggttacagcaacaagagaaatattccagcggat
gatggaacctcttctttgtcggtgcatctggccggcggaacaatcagcagccgtacttgt
gtgcgtacagcaagggataggaacaagacgaagagactggatgggggtaatgaggggatc
cgagtctggataagcgaggtggcctggcgtgacttttacaaacatgttcttgtcaattgg
ccatacgtttgtatgaacaagccatttaaaccagagtactccaatattacgtggtcgtac
gacgaagaccatttcaaagcttggtgtgaaggccgaactgggttcccaatcgttgatgct
gcaatgcgccagctgaaccagctaggttacatgcataaccgctgtcgaatgattgtcgct
tcattcttatcaaaagatctactcattgactggcggaagggtgagcgttactttatggag
cacctcatcgacggcgacttcgccagcaacaatggcggttggggattcagtgccagcgtt
ggcgttgacccccaaccatactttcgcatcttcaatccgcttctacaaagcgagaagttt
gaccccgacggtgagtatattcgcaaatgggtccctgagctgaaggacttgaacaacaag
gagatccacgagccgtatggccgtggagccgatgccaaagccaaaaagaaggggtatcca
aagccaattgtcaaacacaaggattgcagagacagagcattgaacgcgtacaaggaggga
atcgcaaatggcatgtag
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