KEGG   Pochonia chlamydosporia: VFPPC_09045
Entry
VFPPC_09045       CDS       T09407                                 
Name
(RefSeq) SNF2 family helicase
  KO
K15711  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
Organism
pchm  Pochonia chlamydosporia
Brite
KEGG Orthology (KO) [BR:pchm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pchm04121]
    VFPPC_09045
   03400 DNA repair and recombination proteins [BR:pchm03400]
    VFPPC_09045
Enzymes [BR:pchm01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     VFPPC_09045
Ubiquitin system [BR:pchm04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    VFPPC_09045
DNA repair and recombination proteins [BR:pchm03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    VFPPC_09045
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C HIRAN zf-C3HC4_2 zf-C3HC4 zf-C3HC4_3 zf-RING_2 zf-RING_5 zf-rbx1 zf-RING_UBOX zf-C3HC4_4 zf-ANAPC11 zf-RING_10 RING_XB3-XBAT31 zf-RING_6 zf-RING_4 Clusterin AAA_34 Prok-RING_4 EXPB1_D1
Other DBs
NCBI-GeneID: 28851641
NCBI-ProteinID: XP_018140736
UniProt: A0A179FCF3
LinkDB
Position
6:complement(1707612..1710741)
AA seq 903 aa
MPGSKKRGHDVIDLTSDRSVPQKKRRSPASATYSTGIGGTSVYYSSQNGSPRGLAPGSQN
GLSSLSSSQPLTSSQTASYENEVLDLTQDDDGPARELYGTFDTKIVGIQYYRGHASTGEI
VLCRREPGNQYDRNAIRMDNVMYRQIGHLPRKVVEKVAPYVDVGDVTLEAQLTGPKGGYD
CPVRLFFYGPSNPAERSRIEERLKADKLVKATELKRTKREAEAQRTVMGLKAGGTTHGMG
TAGADEPELSLEDILKKSSSVEFRNGTDAIKTFSMDEKYLSEMPTCEQPDGLSAILLPYQ
LQGLAWMISKENPVLPTKEAGNLVQLWKQDNRGYYWNAVTDFVSTSAPELFSGGILADDM
GLGKTLQIISLILTGGPGTTLIVAPVSVMSNWRHQIERHVKPECAPSVFIYHGDKKMTAK
ELMKYDVVITSYGKLARERDSNVPQVLLAQNIQWRRVVLDEGHVIRNARTKVALAACALN
AKSRWVLTGTPITNSVKDLHSLVKFLHITGGIEHPEIFNTRITRKLAAGDASAEIILQAL
MQDICLRRKKDMKFVDLKLPEKKQYLHRITFHPEEKKKYDALLTEARGALQEFQAKAAGQ
KGQFQGVLERLLRLRQTCDHWTLCKDRINQLMKLFEGQDVVPFNEKNTALLQEALRLYLE
SQEDCAICFDIPSGPVITNCKHVFCRACVTKAIQIQHKCPMCRNKLSEDCLLEPSPEGSF
DENFDITTQSSKTEALLQILRATMKNKGSKVVIFSQWTSFLNIIQNQLDAAGIKYCRIDG
SMNTDKRDRAIQALDNDPDTRVMLASLAVCSVGLNLVSADTVILSDSWWAPAIEDQAIDR
VHRLGQTRKTTIWRLIVEGTVEERVLDIQKEKRELVTKAFQEKERKGKAAKDTRMADIAK
LLS
NT seq 2712 nt   +upstreamnt  +downstreamnt
atgcctggttctaaaaaacggggccacgatgttatagatctcactagcgacagatccgtg
ccccaaaaaaagcgtcgctcacctgcttcggcaacatattccactggcattgggggaacg
tcagtttattattcttcgcaaaatggttcaccacgtggactcgctcccggttcacagaat
ggcttgtcctctctttcttcaagccagcctctcacctcgtcccagacagcttcttatgaa
aatgaagtcctggatttgacacaggatgatgatggcccagccagggaattgtatggcacc
ttcgatacgaaaattgttggcatacaatactacagaggtcatgcttcaactggtgagatt
gttctctgtcgcagagagcccggtaatcagtatgaccgaaatgctattcgtatggacaac
gtgatgtatcgacaaattggtcatttgccacgaaaggtggtggagaaagttgcaccctac
gtcgacgttggtgatgttaccttagaggcacaactcactggaccgaagggcggatacgac
tgtcctgtgagactgttcttctatgggccaagcaaccctgctgagcgcagcaggattgag
gaacgcctcaaggcggacaagcttgtcaaggccacggagctgaagcgaactaagagagaa
gcagaagctcagaggaccgttatgggcttaaaggcaggaggcaccacccatgggatgggc
actgcaggcgccgacgagccagaactgtctcttgaggacatcttgaagaagagttcttcc
gttgagtttcgcaatggcacagatgcgatcaagaccttctccatggatgaaaagtaccta
tccgaaatgccgacatgtgaacaacctgacggcctgagtgcgatcctacttccataccag
ttacaaggcctcgcgtggatgatttcgaaagagaacccagtgttaccaacaaaggaagct
ggaaatcttgttcaactttggaagcaagacaatcgagggtattactggaatgctgttaca
gacttcgtgagcacaagtgcccctgagctcttctcgggtggcattttggcagacgatatg
ggtctcggtaagactcttcagatcatcagcctaattctaacgggaggtcctggtaccaca
ttgatagtcgcgcctgtgagtgtgatgagcaactggaggcaccagatcgagcgacacgtc
aagccggaatgcgcaccaagcgtgttcatatatcatggtgataagaaaatgacagccaaa
gaactcatgaaatatgacgtggtcatcacaagctacggcaagttagctcgtgaaagggat
tccaacgttccgcaagttttgctggcacagaatatacagtggaggcgtgtggttcttgac
gaaggccatgttatccgcaatgccaggacaaaggtcgcattggcagcgtgtgctctcaac
gccaagtcacgatgggtgttaaccggtactccgatcaccaactccgtcaaggacttgcat
tcgttggtcaagtttctgcacatcaccgggggtatcgagcacccagagattttcaatact
cggataacaagaaaattggccgctggcgacgccagcgcggaaatcattctgcaggcactc
atgcaggatatttgcctccgacgcaagaaggatatgaaatttgttgatctgaaactgcct
gagaagaagcaatatctacatcggatcactttccacccggaagaaaagaaaaaatatgac
gcattgcttacggaagcccgtggtgccctccaagaatttcaggccaaggcggctgggcag
aaaggtcaattccagggtgtcctggagcggcttttgcgcctacgacaaacgtgtgatcac
tggacgttgtgcaaagaccgtataaaccagttgatgaagttgttcgaaggccaagacgtc
gtaccattcaacgagaagaatacggccctgcttcaggaagctcttcgactctacttggag
agtcaagaggattgcgccatctgcttcgacatccccagtggtccagtcataacaaactgc
aagcacgtgttttgtcgagcctgcgtcacgaaggccattcagattcagcataagtgtccg
atgtgtaggaacaaactttcggaagactgtctgctggaaccatcaccagagggatccttc
gacgaaaactttgacataacaactcaaagttctaagaccgaagctctgttgcagattctt
cgggcaactatgaagaataagggctcaaaggtggtcattttctcgcagtggacctccttc
ctgaacattattcaaaatcaactagatgccgctggtattaaatactgccgtatcgacggt
agtatgaacacggataagcgtgatcgcgcaattcaagcgctggacaacgaccccgatacg
cgggtcatgttggctagtttggccgtttgtagcgtaggtttaaatcttgtatctgcagat
actgtgattttgtcagacagctggtgggcaccggccattgaagatcaggccattgacaga
gttcatcgtctcggccagactagaaagaccaccatctggcgtcttattgttgaaggtaca
gtagaggagagggtgttggacatccagaaggagaagcgagaacttgttaccaaggcgttt
caggaaaaggagagaaaaggaaaggcggcgaaagatacgagaatggcggatattgcgaag
cttctgtcgtga

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