Pochonia chlamydosporia: VFPPC_09052
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Entry
VFPPC_09052 CDS
T09407
Name
(RefSeq) scavenger mRNA decapping enzyme
KO
K12584
m7GpppX diphosphatase [EC:
3.6.1.59
]
Organism
pchm
Pochonia chlamydosporia
Pathway
pchm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pchm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
VFPPC_09052
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pchm03019
]
VFPPC_09052
Enzymes [BR:
pchm01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.59 5'-(N7-methyl 5'-triphosphoguanosine)-[mRNA] diphosphatase
VFPPC_09052
Messenger RNA biogenesis [BR:
pchm03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
VFPPC_09052
3'-5' decay
Other 3'-5' decay factors
VFPPC_09052
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DcpS
DcpS_C
Motif
Other DBs
NCBI-GeneID:
28851648
NCBI-ProteinID:
XP_018140745
UniProt:
A0A179FC73
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All DBs
Position
6:complement(1681112..1682146)
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AA seq
329 aa
AA seq
DB search
MTDLNARAERLVPKFQLERVLNQDQAGRRTSMYGTIDNEPALLILERAPFPTSDNYLGRI
PSSLAKLKNLGANDIYSWSMARTGSDDEGQSQQEKAGFFADLKINLIYPCTESHVKKYSK
QHVRFVTETPEIYKDKIRPYMQSKRDQGRLNWVFNIIEGRTEVEDVIYRTKLGEAGDEGF
LLLPDLNWDRSTLDALHLLAIVERRDIWSLRDLRKKHIPWLRHMKDKVVSATVKTYPAIE
PDQLKLYVHYQPTYYHFHIHIVHVALEAGTTQATGKAVGLDSIIETLKVMAGDDEAGMEA
VSMTYTLGEASELWTEVYEPIKKSGRASQ
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgacggacctcaacgccagggcagagcggctggtgcccaaattccaactggagcgggtt
ctcaaccaagatcaagcaggtcgacggacatccatgtacggcaccatcgacaacgaaccc
gctctcctgattctcgagcgcgcacccttccctacatcagacaactacctaggtcgaatc
ccctcgtcgctcgccaagctgaagaacctgggcgccaatgacatatacagctggagcatg
gctcggacaggcagcgacgacgaagggcagtcccagcaagaaaaagcaggcttcttcgcc
gatttaaaaataaacttgatttatccatgcacagagtcacatgttaaaaagtacagcaag
cagcatgttcgattcgttacggaaacgccagagatatataaagacaaaattagaccatac
atgcagagcaaacgagaccaaggaaggctaaattgggtattcaacattatcgagggccga
acagaagtagaggacgttatttatagaaccaaactcggcgaggcgggcgatgagggcttt
ctcctgctgcccgacctcaattgggaccgcagcacgctggatgcactgcacttgctggcg
attgtggagcggcgggatatctggtccctgagagacttgaggaagaagcacatcccctgg
ctgcggcacatgaaggacaaggtggtttcggctacggtcaagacgtatccggccattgaa
ccagaccaactgaagctgtatgtccactaccagccaacgtactaccactttcacatccac
attgtgcatgtggcgctcgaggctggtactactcaggccacggggaaggcggtcgggctg
gatagcattattgagacgctcaaagttatggctggtgatgatgaggcgggtatggaggcc
gtgtccatgacgtatacgctcggcgaggctagtgaattgtggacagaggtgtatgagccg
attaagaagagcggtagagcttctcaatag
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