KEGG   Pochonia chlamydosporia: VFPPC_09056
Entry
VFPPC_09056       CDS       T09407                                 
Name
(RefSeq) pre-mRNA splicing factor cef-1
  KO
K12860  pre-mRNA-splicing factor CDC5/CEF1
Organism
pchm  Pochonia chlamydosporia
Pathway
pchm03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pchm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    VFPPC_09056
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pchm03041]
    VFPPC_09056
   03400 DNA repair and recombination proteins [BR:pchm03400]
    VFPPC_09056
Spliceosome [BR:pchm03041]
 Complex B
  Other components
   Prp19 complex
    VFPPC_09056
 Complex C
   Prp19-CDC5 complex
    VFPPC_09056
DNA repair and recombination proteins [BR:pchm03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    VFPPC_09056
SSDB
Motif
Pfam: Myb_Cef Myb_DNA-binding Myb_DNA-bind_6 TPR_HPS5_insect Rap1_C
Other DBs
NCBI-GeneID: 28851651
NCBI-ProteinID: XP_018140749
UniProt: A0A179FDI7
LinkDB
Position
6:1670407..1672809
AA seq 779 aa
MPVVKGGVWTNIEDEILKASVSKYGLNQWARVSSLLARKTPKQCKARWSEWLDPSIKKIE
WSKEEDEKLLHLAKIMPTQWRTIAPIVGRTANQCLERYQKLLDEAEARESSSLGLMGPEG
GETQAPSADDVRRLRPGELDPDPETKPARPDTIDLDEDEKEMLSEARARLANTQGKKAKR
KARERQQEESRRLATLQKRRELKTAGINIKVTTRKKGEMDYNADIPFEKKAAPGFYETGE
EQTRNEAQRRAFDPQKQNLATKRKGDEDEDGDRKRRKNEKEGLSDSQKAAIKAGQMQKIR
EAEQSSKRRPLNLPAPQVSEGELEEIIKMGKMGEAANAVARESDNDATRGFVNSYSTLNT
SAPIRTPKAPEQEDHIANEIRNIRALNDTKSALLGGENTPLYEGSGSTGFEGIAPRKQTM
ATPNPLATPLRSGAGVGATPGRPGQTPMRTPRDTFSLNQEDGMPMPSATPRDLRMHDLAM
RNQLRSGLASLPKPKDTEWEFEIPDEEQEVVRGEGDLEEDAAERDRREQARRAAEEELER
RRRTQVMQKDLPRPLVVDLTSMLKKADSIQNAAEALIARETALLMAHDAARYPLPGSQVR
GTHRSIDRFDDDALADARLLILAETKPRPKFDEIQTFFESRAKNSMLLGLGCYNDGEAEQ
EAAMRAAFDAVQDSIMASAEQGAKLEKKLALHLGGYQKRQKMLKDKVNDASEALERARNA
LSGFKTLAISEDVAIDRRLEALREEVMYVTKREREAQEEYRKARDELSALRADGRNGYH
NT seq 2340 nt   +upstreamnt  +downstreamnt
atgccggtcgtcaagggaggtgtttggaccaacattgaggatgagatcctcaaggcctct
gtctccaagtatggccttaaccagtgggctcgcgtgtcgtctctgctggcgcgaaagacg
cctaagcagtgcaaggcacgatggagcgagtggctggatccgagcatcaaaaagatcgaa
tggagcaaagaggaagacgaaaagctcctgcatcttgccaaaattatgcccacacaatgg
cggacgatagccccaattgtcggccgcaccgcgaatcaatgtctcgaacgataccagaag
ctgctcgatgaagctgaggctcgcgagtcgtcgagcttggggttgatgggccccgagggc
ggcgagacgcaagcacccagtgccgacgacgtgcgaagattgcgacctggcgaactcgat
cccgatcccgaaacaaagcctgctcgacccgataccattgacctcgacgaagatgagaag
gaaatgctgagtgaagctcgtgctcgtttggccaatactcaaggtaaaaaggcgaagaga
aaggcccgtgagcgtcagcaagaggaatctcgtcgcctcgcgacattgcagaagcgcaga
gagctcaagacggctggtataaacatcaaggtgaccacgcggaagaagggcgagatggac
tacaatgccgatattccatttgagaaaaaggctgcgcctggattctacgaaacgggtgaa
gagcaaacacgcaacgaagcgcagcgcagggcctttgatccgcagaagcagaatctggcc
acgaaacgaaagggcgatgaagacgaggatggcgaccgcaagagaagaaagaacgagaag
gagggactatctgattcgcaaaaagcagctatcaaggccgggcagatgcaaaagattcga
gaggcggagcaaagcagcaagcgtcgacctctaaacctgcctgcgccacaagtcagtgag
ggagagttggaagagattattaaaatgggcaagatgggcgaggcagcgaatgctgtagct
agggaaagcgacaatgatgcgaccaggggatttgtcaactcatattctacgctcaacacc
agcgcgccaattcgaacaccaaaagcccctgagcaggaagaccacatcgccaacgagatt
cgaaatatccgtgccctgaacgatacgaaatcggcgttgctgggtggtgaaaacacaccg
ttgtacgaaggctcaggctcgaccggcttcgagggtatcgcgcccaggaagcaaaccatg
gcgacgccgaatcctcttgcaaccccattgcgatccggggccggtgttggagcgacacct
ggccgaccgggacaaacgccgatgcgaacgccacgtgatacattctcattgaaccaggaa
gacggtatgccgatgccatcagctacaccccgggacttgaggatgcacgacctcgcaatg
cggaatcaactgcgatccgggcttgcatcgctgcccaaacccaaggacaccgaatgggag
tttgagataccggatgaggagcaagaagtggtgcgaggggaaggtgacctggaggaggat
gctgcagagcgtgatcgtagagagcaggcgagacgtgctgctgaagaggaattagaacgg
agacgaaggactcaagtcatgcagaaagacctgccgaggcccctggttgtcgatttgaca
agcatgctcaagaaagctgacagcattcaaaacgcggcggaagcactaatcgccagggag
acggcattactcatggcccatgacgcagcacgataccccttgcctggctctcaagtcaga
ggcacccaccggtctattgatcgattcgacgacgacgctcttgcagacgctcgcctccta
attctggccgagactaaaccgcgtcccaagtttgacgaaatccaaactttctttgagagt
cgagcaaagaactcgatgttgttgggattggggtgctataacgacggtgaggcagaacaa
gaggcagcaatgcgggctgcatttgacgctgttcaagattcaatcatggcttcagcagag
cagggagccaaactagagaagaagctggctcttcatctcggcggataccaaaaacgacaa
aagatgctcaaggataaggtcaacgacgcctcggaggccctggaaagggccaggaacgca
ctcagcggattcaagacgctggccatttcagaagacgtggcgattgaccgacggttggag
gctctgagagaggaggtcatgtatgttacgaagcgagagagagaggcacaggaagagtat
agaaaggcgagggatgagttgtctgctttaagggcagatggcagaaatggatatcattag

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