KEGG   Pochonia chlamydosporia: VFPPC_09144
Entry
VFPPC_09144       CDS       T09407                                 
Name
(RefSeq) NOT2 family protein
  KO
K12605  CCR4-NOT transcription complex subunit 2
Organism
pchm  Pochonia chlamydosporia
Pathway
pchm03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pchm00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    VFPPC_09144
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pchm03019]
    VFPPC_09144
Messenger RNA biogenesis [BR:pchm03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     VFPPC_09144
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     VFPPC_09144
SSDB
Motif
Pfam: NOT2_3_5_C
Other DBs
NCBI-GeneID: 28851724
NCBI-ProteinID: XP_018140854
UniProt: A0A179FCQ0
LinkDB
Position
6:complement(1373051..1375178)
AA seq 490 aa
MTGAVPQSLRGMPGNFGGQQQPQQPGRSVSSRLPNGKLGMSSNQRRAGLLDHTLRKTDCI
HFEKQQTMDQVGRLAEMYRWEELDSKIKLDRWGEIEFPSLSNNSQLNNANASSMWSSGSS
RNLSGPVQRNQSTPVSSQQGGQEDLFSSGSSRLPSHQSSFRFGNQGSMPSASQGQPSTVD
DFPPLNRAGNGDIGSDRSANLIPSPFGSQQPASGSQRGNGLLNALSANSRANEARSPPGV
VLNRGQEIKRPGADEDSRQKPISRDDGLGKSTVDDTSLNPLGAIGNEDSMAKLRDVKDSQ
APDGVDPLNGMSAVDKWGIKGLRTLMNNYPDYQAMVVGMDPITVGLDINSQEMISTQVYS
LFDDVAPRPTVNGSKFRLPECYNVTNVQPIESKIQNFNEETLFWIFYSCPADAKQQMAAV
ELHSRNWRWHKKHQIWLTKDEHMTPQILSPNHERGYYIVWDTESWRKDRRELTLFYGDLD
TTLSQPPAIS
NT seq 1473 nt   +upstreamnt  +downstreamnt
atgaccggagcagtgccgcaatctctcagaggcatgcctggaaacttcggcggccagcaa
caacctcaacaaccaggacgatcggtatcgagtcggctaccgaatggaaaactaggtatg
agttcgaaccagcgacgtgctgggctcctcgatcacacgctcaggaagactgactgtatt
cacttcgaaaaacagcaaacaatggatcaggttgggcgtttggcggaaatgtaccgatgg
gaggagctggattccaaaatcaagctcgacagatggggggaaatcgaattcccatcgctg
tcaaacaactcacagcttaacaatgccaatgcttcgtcgatgtggtcgtctgggagctcc
cgaaacctgagtggcccggttcaacgaaatcagtccactccggtttcatctcagcaaggc
ggacaagaagatttgttttcttcaggctcatcacgtttgccttcgcaccagtcctcgttt
cgattcgggaaccaaggaagtatgccttcagcctcccaaggacaacctagtaccgttgac
gactttcctccactgaatagagcaggaaatggggatattgggtcagatcgaagtgcgaac
ctcattccctcaccatttggatcacaacaaccagcgtcagggtcgcagaggggcaatggt
ctgctgaatgcattgtccgcgaacagtagggcaaacgaagctcggtcaccccctggggtt
gtattaaaccgggggcaagagatcaaacgacctggcgccgatgaggatagcaggcaaaaa
cctatatcgcgagacgatgggctaggcaaatccactgtggatgacacgagtctaaatccc
ttgggcgcaattggaaacgaagactcgatggcaaagctgagagatgtgaaggacagccaa
gcccccgacggcgtcgacccccttaatgggatgagcgcagttgacaaatggggaatcaag
ggcttgcggacgttgatgaacaactacccagactaccaggccatggttgttggcatggac
cctatcacggttgggctggacattaactcgcaagagatgatctcaacacaagtatactcg
ctattcgacgatgtggctccgcgaccgacagtcaatggtagcaagttccgccttcccgag
tgctacaacgtaaccaacgtccagccaatcgagagcaaaatacaaaacttcaatgaagaa
acgttattttggatcttctacagctgccctgcagatgccaagcagcaaatggcggcggta
gaactgcattctcgaaattggagatggcacaagaaacatcagatttggctcactaaggat
gaacacatgacaccgcagattttgagccccaatcatgaacggggttactacatcgtgtgg
gacactgagagctggcgaaaagataggcgagagcttactctgttctacggcgatttggat
accacacttagccaacccccagcaatatcttaa

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