Pochonia chlamydosporia: VFPPC_09146
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Entry
VFPPC_09146 CDS
T09407
Name
(RefSeq) RNA binding protein Pym
KO
K14294
partner of Y14 and mago
Organism
pchm
Pochonia chlamydosporia
Pathway
pchm03013
Nucleocytoplasmic transport
pchm03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pchm00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
VFPPC_09146
03015 mRNA surveillance pathway
VFPPC_09146
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pchm03019
]
VFPPC_09146
Messenger RNA biogenesis [BR:
pchm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
VFPPC_09146
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mago-bind
Nucleo_P87
Motif
Other DBs
NCBI-GeneID:
28851726
NCBI-ProteinID:
XP_018140857
UniProt:
A0A179FD19
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Position
6:complement(1368642..1369259)
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AA seq
205 aa
AA seq
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MPSQATPTSTNAGIVTDENSGERHIPESVRADGSTRKAIKIRPGYRPPEDVEVYKNRTAE
AFRDRGKRIGIPGAAGVKEEKPEQASSAASNKNAKRREARKKAKAGTENDDTTTTEQTTQ
TPKVDEVDPEVEREKKARNLKKKLKQAKELKNKKEGGEALLPEQIAKVIKINELIRELDA
LGFDSEGEPKSKSDGESKAVEGTKE
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atgccctcacaagccacacctaccagcaccaacgctggaatcgtcacagacgaaaacagc
ggagagcgtcacatccccgaatcagttcgtgccgatgggagcacccggaaagccatcaaa
atccgccccggataccgccctcccgaggacgtcgaagtatacaagaaccgaaccgcagaa
gctttccgcgatcgaggaaaaagaataggcattcccggagccgcgggcgtaaaggaggag
aaaccagagcaggcctcttccgccgccagcaataagaacgcaaagcgaagagaagcccgc
aagaaggccaaggctggtaccgaaaacgatgacacaaccacgactgaacaaaccacgcag
actcccaaggtggatgaggttgatccggaggttgagcgagaaaagaaggcccgtaatctt
aagaagaagctaaaacaggccaaggagctgaagaataagaaggagggtggagaggcacta
ctcccagagcagatagccaaggtgattaagataaacgaacttattcgcgagttagatgct
cttggctttgattcggagggtgagccgaagtcgaaatcggatggggagtccaaggcggtg
gaaggaacaaaggagtga
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